RNA–Protein interactions for RNA: ENST00000368527.7

TPM3-209, Transcript of tropomyosin 3, human

TSL 4

Gene TPM3, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TPM3-209	ENST00000368527	TLDC2	A0PJX2	215 aa		10.81	□□□□□ -0.68
TPM3-209	ENST00000368527	SIGLEC16	A6NMB1	481 aa		10.81	□□□□□ -0.68
TPM3-209	ENST00000368527	ITGAV	P06756	1048 aa		10.81	□□□□□ -0.68
TPM3-209	ENST00000368527	GSTA1	P08263	222 aa		10.81	□□□□□ -0.68
TPM3-209	ENST00000368527	IVD	P26440	423 aa		10.81	□□□□□ -0.68
TPM3-209	ENST00000368527	ITGA8	P53708	1063 aa		10.81	□□□□□ -0.68
TPM3-209	ENST00000368527	SLC18A1	P54219	525 aa		10.81	□□□□□ -0.68
TPM3-209	ENST00000368527	CCNA1	P78396	465 aa		10.81	□□□□□ -0.68
TPM3-209	ENST00000368527	LACTB	P83111	547 aa	Predicted RBP	10.81	□□□□□ -0.68
TPM3-209	ENST00000368527	CDC42EP1	Q00587	391 aa		10.81	□□□□□ -0.68
TPM3-209	ENST00000368527	LAMC2	Q13753	1193 aa		10.81	□□□□□ -0.68
TPM3-209	ENST00000368527	AUH	Q13825	339 aa	Known RBP	10.81	□□□□□ -0.68
TPM3-209	ENST00000368527	ZNF268	Q14587	947 aa	Predicted RBP	10.81	□□□□□ -0.68
TPM3-209	ENST00000368527	LACTB2	Q53H82	288 aa	Predicted RBP	10.81	□□□□□ -0.68
TPM3-209	ENST00000368527	TTC19	Q6DKK2	380 aa	Predicted RBP	10.81	□□□□□ -0.68
TPM3-209	ENST00000368527	ARHGEF18	Q6ZSZ5	1173 aa		10.81	□□□□□ -0.68
TPM3-209	ENST00000368527	GSTA5	Q7RTV2	222 aa		10.81	□□□□□ -0.68
TPM3-209	ENST00000368527	TDRP	Q86YL5	185 aa		10.81	□□□□□ -0.68
TPM3-209	ENST00000368527	THNSL1	Q8IYQ7	743 aa		10.81	□□□□□ -0.68
TPM3-209	ENST00000368527	RNF149	Q8NC42	400 aa		10.81	□□□□□ -0.68
TPM3-209	ENST00000368527	OR5B17	Q8NGF7	314 aa		10.81	□□□□□ -0.68
TPM3-209	ENST00000368527	ZC3H15	Q8WU90	426 aa	Known RBP	10.81	□□□□□ -0.68
TPM3-209	ENST00000368527	C1orf54	Q8WWF1	131 aa		10.81	□□□□□ -0.68
TPM3-209	ENST00000368527	ZBTB9	Q96C00	473 aa		10.81	□□□□□ -0.68
TPM3-209	ENST00000368527	GRAMD1A	Q96CP6	724 aa		10.81	□□□□□ -0.68
TPM3-209	ENST00000368527	SEC16B	Q96JE7	1060 aa		10.81	□□□□□ -0.68
TPM3-209	ENST00000368527	ZBTB45	Q96K62	511 aa	Predicted RBP	10.81	□□□□□ -0.68
TPM3-209	ENST00000368527	MMP19	Q99542	508 aa		10.81	□□□□□ -0.68
TPM3-209	ENST00000368527	ASCC2	Q9H1I8	757 aa	Predicted RBP	10.81	□□□□□ -0.68
TPM3-209	ENST00000368527	KDM4C	Q9H3R0	1056 aa		10.81	□□□□□ -0.68
TPM3-209	ENST00000368527	RPF1	Q9H9Y2	349 aa	Known RBP	10.81	□□□□□ -0.68
TPM3-209	ENST00000368527	PTPRH	Q9HD43	1115 aa		10.81	□□□□□ -0.68
TPM3-209	ENST00000368527	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	10.81	□□□□□ -0.68	8e-7	■■■■■ 194.6
TPM3-209	ENST00000368527	ERAP1	Q9NZ08	941 aa		10.81	□□□□□ -0.68
TPM3-209	ENST00000368527	SHOC2	Q9UQ13	582 aa		10.81	□□□□□ -0.68
TPM3-209	ENST00000368527	NEU2	Q9Y3R4	380 aa		10.81	□□□□□ -0.68
TPM3-209	ENST00000368527	LCT	P09848	1927 aa		10.8	□□□□□ -0.68
TPM3-209	ENST00000368527	TCRBV5S1A1T	A0A578	114 aa		10.8	□□□□□ -0.68
TPM3-209	ENST00000368527		H0YHG0	523 aa		10.8	□□□□□ -0.68
TPM3-209	ENST00000368527	ABLIM1	O14639	778 aa		10.8	□□□□□ -0.68
TPM3-209	ENST00000368527	DNALI1	O14645	258 aa	Predicted RBP	10.8	□□□□□ -0.68
TPM3-209	ENST00000368527	LIAS	O43766	372 aa		10.8	□□□□□ -0.68
TPM3-209	ENST00000368527	KRT1	P04264	644 aa		10.8	□□□□□ -0.68
TPM3-209	ENST00000368527	SHBG	P04278	402 aa		10.8	□□□□□ -0.68
TPM3-209	ENST00000368527	CHN1	P15882	459 aa		10.8	□□□□□ -0.68
TPM3-209	ENST00000368527	DRD4	P21917	467 aa		10.8	□□□□□ -0.68
TPM3-209	ENST00000368527	KLRC2	P26717	231 aa		10.8	□□□□□ -0.68
TPM3-209	ENST00000368527	TMOD1	P28289	359 aa		10.8	□□□□□ -0.68
TPM3-209	ENST00000368527	SSR1	P43307	286 aa	Known RBP	10.8	□□□□□ -0.68
TPM3-209	ENST00000368527	KCNJ1	P48048	391 aa		10.8	□□□□□ -0.68
TPM3-209	ENST00000368527	PCBP1	Q15365	356 aa	Known RBP eCLIP	10.8	□□□□□ -0.68
TPM3-209	ENST00000368527	TMEM132A	Q24JP5	1023 aa		10.8	□□□□□ -0.68
TPM3-209	ENST00000368527	TFDP3	Q5H9I0	405 aa		10.8	□□□□□ -0.68
TPM3-209	ENST00000368527	ZNF667	Q5HYK9	610 aa		10.8	□□□□□ -0.68
TPM3-209	ENST00000368527	PPP1R15B	Q5SWA1	713 aa		10.8	□□□□□ -0.68
TPM3-209	ENST00000368527	TREML2	Q5T2D2	321 aa		10.8	□□□□□ -0.68
TPM3-209	ENST00000368527	IZUMO3	Q5VZ72	239 aa		10.8	□□□□□ -0.68
TPM3-209	ENST00000368527	LMBRD2	Q68DH5	695 aa	Predicted RBP	10.8	□□□□□ -0.68
TPM3-209	ENST00000368527	SPOPL	Q6IQ16	392 aa		10.8	□□□□□ -0.68
TPM3-209	ENST00000368527	HIBCH	Q6NVY1	386 aa	Predicted RBP	10.8	□□□□□ -0.68
TPM3-209	ENST00000368527	CCDC62	Q6P9F0	684 aa		10.8	□□□□□ -0.68
TPM3-209	ENST00000368527	SPOCD1	Q6ZMY3	1216 aa		10.8	□□□□□ -0.68
TPM3-209	ENST00000368527	CCDC25	Q86WR0	208 aa		10.8	□□□□□ -0.68
TPM3-209	ENST00000368527	MICALL1	Q8N3F8	863 aa		10.8	□□□□□ -0.68
TPM3-209	ENST00000368527	GBP7	Q8N8V2	638 aa	Predicted RBP	10.8	□□□□□ -0.68
TPM3-209	ENST00000368527	ZNF526	Q8TF50	670 aa	Predicted RBP	10.8	□□□□□ -0.68
TPM3-209	ENST00000368527	AFG1L	Q8WV93	481 aa		10.8	□□□□□ -0.68
TPM3-209	ENST00000368527	EMID1	Q96A84	441 aa	Predicted RBP	10.8	□□□□□ -0.68
TPM3-209	ENST00000368527	SPATA33	Q96N06	139 aa		10.8	□□□□□ -0.68
TPM3-209	ENST00000368527	SLITRK1	Q96PX8	696 aa		10.8	□□□□□ -0.68
TPM3-209	ENST00000368527	TSPAN18	Q96SJ8	248 aa		10.8	□□□□□ -0.68
TPM3-209	ENST00000368527	SELENOS	Q9BQE4	189 aa		10.8	□□□□□ -0.68
TPM3-209	ENST00000368527	BCO2	Q9BYV7	579 aa		10.8	□□□□□ -0.68
TPM3-209	ENST00000368527	FRMD8	Q9BZ67	464 aa	Predicted RBP	10.8	□□□□□ -0.68
TPM3-209	ENST00000368527	PCDH9	Q9HC56	1237 aa		10.8	□□□□□ -0.68
TPM3-209	ENST00000368527	VTA1	Q9NP79	307 aa		10.8	□□□□□ -0.68
TPM3-209	ENST00000368527	CHST7	Q9NS84	486 aa		10.8	□□□□□ -0.68
TPM3-209	ENST00000368527	DDX20	Q9UHI6	824 aa	Known RBP	10.8	□□□□□ -0.68
TPM3-209	ENST00000368527	PAPPA2	Q9BXP8	1791 aa		10.8	□□□□□ -0.68
TPM3-209	ENST00000368527	DICER1	Q9UPY3	1922 aa	Known RBP	10.8	□□□□□ -0.68
TPM3-209	ENST00000368527	LRRC37A2	A6NM11	1700 aa		10.79	□□□□□ -0.68
TPM3-209	ENST00000368527	TRIM66	O15016	1216 aa		10.79	□□□□□ -0.68
TPM3-209	ENST00000368527	HMGCR	P04035	888 aa		10.79	□□□□□ -0.68
TPM3-209	ENST00000368527	HOXC6	P09630	235 aa		10.79	□□□□□ -0.68
TPM3-209	ENST00000368527	SRGAP2C	P0DJJ0	459 aa		10.79	□□□□□ -0.68
TPM3-209	ENST00000368527	FGFR4	P22455	802 aa		10.79	□□□□□ -0.68
TPM3-209	ENST00000368527	PHB	P35232	272 aa		10.79	□□□□□ -0.68
TPM3-209	ENST00000368527	SEC24C	P53992	1094 aa		10.79	□□□□□ -0.68
TPM3-209	ENST00000368527	HIRA	P54198	1017 aa	Predicted RBP	10.79	□□□□□ -0.68
TPM3-209	ENST00000368527	VCP	P55072	806 aa	Known RBP	10.79	□□□□□ -0.68
TPM3-209	ENST00000368527	MYL6	P60660	151 aa		10.79	□□□□□ -0.68
TPM3-209	ENST00000368527	TFAM	Q00059	246 aa	Known RBP	10.79	□□□□□ -0.68
TPM3-209	ENST00000368527	ACTN3	Q08043	901 aa	Predicted RBP	10.79	□□□□□ -0.68
TPM3-209	ENST00000368527	SNX1	Q13596	522 aa		10.79	□□□□□ -0.68
TPM3-209	ENST00000368527	RNF187	Q5TA31	235 aa	Predicted RBP	10.79	□□□□□ -0.68
TPM3-209	ENST00000368527	GPAT2	Q6NUI2	795 aa		10.79	□□□□□ -0.68
TPM3-209	ENST00000368527	ANKS1B	Q7Z6G8	1248 aa		10.79	□□□□□ -0.68
TPM3-209	ENST00000368527	PIGW	Q7Z7B1	504 aa		10.79	□□□□□ -0.68
TPM3-209	ENST00000368527	ZNF467	Q7Z7K2	595 aa	Predicted RBP	10.79	□□□□□ -0.68
TPM3-209	ENST00000368527	VSIG1	Q86XK7	387 aa		10.79	□□□□□ -0.68

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