RNA–Protein interactions for RNA: ENST00000368063.5

NCSTN-202, Transcript of nicastrin, humanhuman

TSL 1 (best) BASIC

Gene NCSTN, Length 3,031 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-202ENST00000368063 SSU72Q9NP77 194 aaKnown RBP13.81□□□□□ -0.2
NCSTN-202ENST00000368063 GCNT4Q9P109 453 aa13.81□□□□□ -0.2
NCSTN-202ENST00000368063 NHSL1Q5SYE7 1610 aa13.81□□□□□ -0.2
NCSTN-202ENST00000368063 WDR91A4D1P6 747 aa13.81□□□□□ -0.2
NCSTN-202ENST00000368063 ATF2P15336 505 aa13.81□□□□□ -0.2
NCSTN-202ENST00000368063 HOXD11P31277 338 aaPredicted RBP13.81□□□□□ -0.2
NCSTN-202ENST00000368063 PHKA2P46019 1235 aa13.81□□□□□ -0.2
NCSTN-202ENST00000368063 NOP14P78316 857 aaKnown RBP13.81□□□□□ -0.2
NCSTN-202ENST00000368063 C16orf72Q14CZ0 275 aa13.81□□□□□ -0.2
NCSTN-202ENST00000368063 TRIP13Q15645 432 aaPredicted RBP13.81□□□□□ -0.2
NCSTN-202ENST00000368063 PPP4R3CPQ6ZMV5 832 aa13.81□□□□□ -0.2
NCSTN-202ENST00000368063 SYDE1Q6ZW31 735 aaPredicted RBP13.81□□□□□ -0.2
NCSTN-202ENST00000368063 ADGRA1Q86SQ6 560 aa13.81□□□□□ -0.2
NCSTN-202ENST00000368063 ALYREFQ86V81 257 aaKnown RBP13.81□□□□□ -0.2
NCSTN-202ENST00000368063 TSSK1BQ9BXA7 367 aa13.81□□□□□ -0.2
NCSTN-202ENST00000368063 OSBPL6Q9BZF3 934 aa13.81□□□□□ -0.2
NCSTN-202ENST00000368063 WNT8AQ9H1J5 351 aa13.81□□□□□ -0.2
NCSTN-202ENST00000368063 CNNM1Q9NRU3 951 aa13.81□□□□□ -0.2
NCSTN-202ENST00000368063 CYP26A1O43174 497 aa13.8□□□□□ -0.2
NCSTN-202ENST00000368063 TFPTP0C1Z6 253 aa13.8□□□□□ -0.2
NCSTN-202ENST00000368063 FGFR2P21802 821 aa13.8□□□□□ -0.2
NCSTN-202ENST00000368063 RRM1P23921 792 aa13.8□□□□□ -0.2
NCSTN-202ENST00000368063 FXR2P51116 673 aaKnown RBP eCLIP13.8□□□□□ -0.2
NCSTN-202ENST00000368063 INAQ16352 499 aa13.8□□□□□ -0.2
NCSTN-202ENST00000368063 CYP4F22Q6NT55 531 aa13.8□□□□□ -0.2
NCSTN-202ENST00000368063 ALLCQ8N6M5 410 aa13.8□□□□□ -0.2
NCSTN-202ENST00000368063 ICA1LQ8NDH6 482 aa13.8□□□□□ -0.2
NCSTN-202ENST00000368063 DDI1Q8WTU0 396 aa13.8□□□□□ -0.2
NCSTN-202ENST00000368063 GCNAQ96QF7 691 aa13.8□□□□□ -0.2
NCSTN-202ENST00000368063 MTMR9Q96QG7 549 aa13.8□□□□□ -0.2
NCSTN-202ENST00000368063 MKNK1Q9BUB5 465 aa13.8□□□□□ -0.2
NCSTN-202ENST00000368063 BARHL2Q9NY43 387 aa13.8□□□□□ -0.2
NCSTN-202ENST00000368063 SLAIN2Q9P270 581 aa13.8□□□□□ -0.2
NCSTN-202ENST00000368063 RSL24D1Q9UHA3 163 aaKnown RBP13.8□□□□□ -0.2
NCSTN-202ENST00000368063 GPC6Q9Y625 555 aaPredicted RBP13.8□□□□□ -0.2
NCSTN-202ENST00000368063 LAMB1P07942 1786 aa13.8□□□□□ -0.2
NCSTN-202ENST00000368063 A0A088AWK7 358 aa13.8□□□□□ -0.2
NCSTN-202ENST00000368063 ADCY6O43306 1168 aa13.8□□□□□ -0.2
NCSTN-202ENST00000368063 DNAJA2O60884 412 aa13.8□□□□□ -0.2
NCSTN-202ENST00000368063 TNFAIP8O95379 198 aa13.8□□□□□ -0.2
NCSTN-202ENST00000368063 S100A1P23297 94 aa13.8□□□□□ -0.2
NCSTN-202ENST00000368063 TRIP10Q15642 601 aa13.8□□□□□ -0.2
NCSTN-202ENST00000368063 CPNE8Q86YQ8 564 aa13.8□□□□□ -0.2
NCSTN-202ENST00000368063 CLIP3Q96DZ5 547 aa13.8□□□□□ -0.2
NCSTN-202ENST00000368063 GREM2Q9H772 168 aa13.8□□□□□ -0.2
NCSTN-202ENST00000368063 MANSC1Q9H8J5 431 aa13.8□□□□□ -0.2
NCSTN-202ENST00000368063 CHST7Q9NS84 486 aa13.8□□□□□ -0.2
NCSTN-202ENST00000368063 CLEC11AQ9Y240 323 aa13.8□□□□□ -0.2
NCSTN-202ENST00000368063 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.8□□□□□ -0.2
NCSTN-202ENST00000368063 GIT1Q9Y2X7 761 aa13.8□□□□□ -0.2
NCSTN-202ENST00000368063 TIMM22Q9Y584 194 aa13.8□□□□□ -0.2
NCSTN-202ENST00000368063 KLRF2D3W0D1 207 aa13.8□□□□□ -0.2
NCSTN-202ENST00000368063 POC1B-GALNT4F8VUJ3 575 aa13.8□□□□□ -0.2
NCSTN-202ENST00000368063 FUCA1P04066 466 aa13.8□□□□□ -0.2
NCSTN-202ENST00000368063 MAGEA4P43358 317 aa13.8□□□□□ -0.2
NCSTN-202ENST00000368063 NR1H2P55055 460 aa13.8□□□□□ -0.2
NCSTN-202ENST00000368063 CCNIQ14094 377 aa13.8□□□□□ -0.2
NCSTN-202ENST00000368063 SGO2Q562F6 1265 aa13.8□□□□□ -0.2
NCSTN-202ENST00000368063 EFHC1Q5JVL4 640 aa13.8□□□□□ -0.2
NCSTN-202ENST00000368063 PCNX4Q63HM2 1172 aa13.8□□□□□ -0.2
NCSTN-202ENST00000368063 KRT25Q7Z3Z0 450 aa13.8□□□□□ -0.2
NCSTN-202ENST00000368063 NEK8Q86SG6 692 aa13.8□□□□□ -0.2
NCSTN-202ENST00000368063 NOP9Q86U38 636 aaKnown RBP13.8□□□□□ -0.2
NCSTN-202ENST00000368063 FAM89AQ96GI7 184 aa13.8□□□□□ -0.2
NCSTN-202ENST00000368063 RBM15Q96T37 977 aaKnown RBP eCLIP13.8□□□□□ -0.21e-7■■■□□ 19.1
NCSTN-202ENST00000368063 GPR88Q9GZN0 384 aa13.8□□□□□ -0.2
NCSTN-202ENST00000368063 GBA3Q9H227 469 aa13.8□□□□□ -0.2
NCSTN-202ENST00000368063 CCPG1Q9ULG6 757 aa13.8□□□□□ -0.2
NCSTN-202ENST00000368063 MYOCOSA0A1B0GUC4 107 aa13.79□□□□□ -0.2
NCSTN-202ENST00000368063 FSCN2O14926 492 aa13.79□□□□□ -0.2
NCSTN-202ENST00000368063 ITM2AO43736 263 aa13.79□□□□□ -0.2
NCSTN-202ENST00000368063 MYL2P10916 166 aa13.79□□□□□ -0.2
NCSTN-202ENST00000368063 PCP11498 1178 aaKnown RBP13.79□□□□□ -0.2
NCSTN-202ENST00000368063 XRCC5P13010 732 aaKnown RBP13.79□□□□□ -0.2
NCSTN-202ENST00000368063 HOXA10P31260 410 aaPredicted RBP13.79□□□□□ -0.2
NCSTN-202ENST00000368063 STIP1P31948 543 aaKnown RBP13.79□□□□□ -0.2
NCSTN-202ENST00000368063 ECM1Q16610 540 aa13.79□□□□□ -0.2
NCSTN-202ENST00000368063 DCAF17Q5H9S7 520 aaPredicted RBP13.79□□□□□ -0.2
NCSTN-202ENST00000368063 OGFRL1Q5TC84 451 aaPredicted RBP13.79□□□□□ -0.2
NCSTN-202ENST00000368063 CLEC4GQ6UXB4 293 aa13.79□□□□□ -0.2
NCSTN-202ENST00000368063 HEATR3Q7Z4Q2 680 aa13.79□□□□□ -0.2
NCSTN-202ENST00000368063 IQCF2Q8IXL9 164 aa13.79□□□□□ -0.2
NCSTN-202ENST00000368063 CABLES1Q8TDN4 633 aa13.79□□□□□ -0.2
NCSTN-202ENST00000368063 STARD8Q92502 1023 aa13.79□□□□□ -0.2
NCSTN-202ENST00000368063 SLC38A7Q9NVC3 462 aa13.79□□□□□ -0.2
NCSTN-202ENST00000368063 RRN3Q9NYV6 651 aa13.79□□□□□ -0.2
NCSTN-202ENST00000368063 TAGLN3Q9UI15 199 aa13.79□□□□□ -0.2
NCSTN-202ENST00000368063 CAPN8A6NHC0 703 aa13.79□□□□□ -0.2
NCSTN-202ENST00000368063 POTEMA6NI47 508 aa13.79□□□□□ -0.2
NCSTN-202ENST00000368063 ERVV-2B6SEH9 535 aa13.79□□□□□ -0.2
NCSTN-202ENST00000368063 SPECC1L-ADORA2AF8WAN1 911 aa13.79□□□□□ -0.2
NCSTN-202ENST00000368063 CLDN3O15551 220 aa13.79□□□□□ -0.2
NCSTN-202ENST00000368063 CDK9P50750 372 aaKnown RBP13.79□□□□□ -0.2
NCSTN-202ENST00000368063 ACAP1Q15027 740 aa13.79□□□□□ -0.2
NCSTN-202ENST00000368063 DCDC5Q6ZRR9 648 aa13.79□□□□□ -0.2
NCSTN-202ENST00000368063 PPM1KQ8N3J5 372 aa13.79□□□□□ -0.2
NCSTN-202ENST00000368063 SDR16C5Q8N3Y7 309 aa13.79□□□□□ -0.2
NCSTN-202ENST00000368063 SNX29Q8TEQ0 813 aa13.79□□□□□ -0.2
NCSTN-202ENST00000368063 CFAP57Q96MR6 1250 aa13.79□□□□□ -0.2
NCSTN-202ENST00000368063 VPS11Q9H270 941 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms