RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 LCHNA4D1U4 455 aa12.25□□□□□ -0.45
USF1-201ENST00000368019 RASGRF2O14827 1237 aa12.25□□□□□ -0.45
USF1-201ENST00000368019 RIPK2O43353 540 aa12.25□□□□□ -0.45
USF1-201ENST00000368019 TLL1O43897 1013 aa12.25□□□□□ -0.45
USF1-201ENST00000368019 SNX3O60493 162 aa12.25□□□□□ -0.45
USF1-201ENST00000368019 SUN1O94901 812 aa12.25□□□□□ -0.45
USF1-201ENST00000368019 CFBP00751 764 aa12.25□□□□□ -0.45
USF1-201ENST00000368019 CASP4P49662 377 aa12.25□□□□□ -0.45
USF1-201ENST00000368019 KCNQ1P51787 676 aa12.25□□□□□ -0.45
USF1-201ENST00000368019 DEFB103AP81534 67 aa12.25□□□□□ -0.45
USF1-201ENST00000368019 MYL7Q01449 175 aa12.25□□□□□ -0.45
USF1-201ENST00000368019 CCDC15Q0P6D6 951 aa12.25□□□□□ -0.45
USF1-201ENST00000368019 PTK7Q13308 1070 aa12.25□□□□□ -0.45
USF1-201ENST00000368019 HIC1Q14526 733 aa12.25□□□□□ -0.45
USF1-201ENST00000368019 CNGA2Q16280 664 aa12.25□□□□□ -0.45
USF1-201ENST00000368019 AAK1Q2M2I8 961 aa12.25□□□□□ -0.45
USF1-201ENST00000368019 RINT1Q6NUQ1 792 aa12.25□□□□□ -0.45
USF1-201ENST00000368019 CNKSR3Q6P9H4 555 aa12.25□□□□□ -0.45
USF1-201ENST00000368019 VSIG10LQ86VR7 867 aa12.25□□□□□ -0.45
USF1-201ENST00000368019 LRRC34Q8IZ02 419 aa12.25□□□□□ -0.45
USF1-201ENST00000368019 SAMD3Q8N6K7 520 aa12.25□□□□□ -0.45
USF1-201ENST00000368019 PRELID2Q8N945 189 aa12.25□□□□□ -0.45
USF1-201ENST00000368019 WNT8BQ93098 351 aa12.25□□□□□ -0.45
USF1-201ENST00000368019 AGPAT1Q99943 283 aa12.25□□□□□ -0.45
USF1-201ENST00000368019 SELENOSQ9BQE4 189 aa12.25□□□□□ -0.45
USF1-201ENST00000368019 PLVAPQ9BX97 442 aa12.25□□□□□ -0.45
USF1-201ENST00000368019 FOXP3Q9BZS1 431 aa12.25□□□□□ -0.45
USF1-201ENST00000368019 INTS2Q9H0H0 1204 aaKnown RBP12.25□□□□□ -0.45
USF1-201ENST00000368019 LRRC19Q9H756 370 aa12.25□□□□□ -0.45
USF1-201ENST00000368019 POLD4Q9HCU8 107 aa12.25□□□□□ -0.45
USF1-201ENST00000368019 ERVK-5Q9HDB9 667 aa12.25□□□□□ -0.45
USF1-201ENST00000368019 OSGEPQ9NPF4 335 aa12.25□□□□□ -0.45
USF1-201ENST00000368019 COG5Q9UP83 839 aa12.25□□□□□ -0.45
USF1-201ENST00000368019 FRMD4BQ9Y2L6 1034 aa12.25□□□□□ -0.45
USF1-201ENST00000368019 PCDHA1Q9Y5I3 950 aa12.25□□□□□ -0.45
USF1-201ENST00000368019 ACTL7BQ9Y614 415 aa12.25□□□□□ -0.45
USF1-201ENST00000368019 ALG6Q9Y672 507 aa12.25□□□□□ -0.45
USF1-201ENST00000368019 MYH11P35749 1972 aa12.25□□□□□ -0.45
USF1-201ENST00000368019 KAT6AQ92794 2004 aa12.25□□□□□ -0.45
USF1-201ENST00000368019 ABHD14A-ACY1A0A1B0GW23 586 aa12.24□□□□□ -0.45
USF1-201ENST00000368019 LIN7AO14910 233 aaPredicted RBP12.24□□□□□ -0.45
USF1-201ENST00000368019 RTN2O75298 545 aa12.24□□□□□ -0.45
USF1-201ENST00000368019 GJB6O95452 261 aa12.24□□□□□ -0.45
USF1-201ENST00000368019 CCND1P24385 295 aa12.24□□□□□ -0.45
USF1-201ENST00000368019 GPC5P78333 572 aa12.24□□□□□ -0.45
USF1-201ENST00000368019 SP2Q02086 613 aa12.24□□□□□ -0.45
USF1-201ENST00000368019 CACNB1Q02641 598 aaPredicted RBP12.24□□□□□ -0.45
USF1-201ENST00000368019 ENPEPQ07075 957 aa12.24□□□□□ -0.45
USF1-201ENST00000368019 CETN1Q12798 172 aa12.24□□□□□ -0.45
USF1-201ENST00000368019 PPP2R5CQ13362 524 aa12.24□□□□□ -0.45
USF1-201ENST00000368019 MKRN4PQ13434 485 aaPredicted RBP12.24□□□□□ -0.45
USF1-201ENST00000368019 AUHQ13825 339 aaKnown RBP12.24□□□□□ -0.45
USF1-201ENST00000368019 CTTNQ14247 550 aaKnown RBP12.24□□□□□ -0.45
USF1-201ENST00000368019 SLC29A2Q14542 456 aa12.24□□□□□ -0.45
USF1-201ENST00000368019 MBTPS1Q14703 1052 aa12.24□□□□□ -0.45
USF1-201ENST00000368019 MFSD10Q14728 455 aa12.24□□□□□ -0.45
USF1-201ENST00000368019 CELF3Q5SZQ8 465 aaKnown RBP12.24□□□□□ -0.45
USF1-201ENST00000368019 HIBCHQ6NVY1 386 aaPredicted RBP12.24□□□□□ -0.45
USF1-201ENST00000368019 C1orf186Q6ZWK4 172 aa12.24□□□□□ -0.45
USF1-201ENST00000368019 TMCO2Q7Z6W1 182 aaPredicted RBP12.24□□□□□ -0.45
USF1-201ENST00000368019 GLYCTKQ8IVS8 523 aa12.24□□□□□ -0.45
USF1-201ENST00000368019 DHX37Q8IY37 1157 aaKnown RBP12.24□□□□□ -0.45
USF1-201ENST00000368019 RIBC1Q8N443 379 aaPredicted RBP12.24□□□□□ -0.45
USF1-201ENST00000368019 C7orf31Q8N865 590 aa12.24□□□□□ -0.45
USF1-201ENST00000368019 IL31RAQ8NI17 732 aa12.24□□□□□ -0.45
USF1-201ENST00000368019 FBXO25Q8TCJ0 367 aa12.24□□□□□ -0.45
USF1-201ENST00000368019 N4BP2L2Q92802 583 aaPredicted RBP12.24□□□□□ -0.45
USF1-201ENST00000368019 CD101Q93033 1021 aa12.24□□□□□ -0.45
USF1-201ENST00000368019 EIF2AK1Q9BQI3 630 aaKnown RBP12.24□□□□□ -0.45
USF1-201ENST00000368019 KATNAL1Q9BW62 490 aa12.24□□□□□ -0.45
USF1-201ENST00000368019 STRA6Q9BX79 667 aa12.24□□□□□ -0.45
USF1-201ENST00000368019 AZI2Q9H6S1 392 aa12.24□□□□□ -0.45
USF1-201ENST00000368019 PARVGQ9HBI0 331 aa12.24□□□□□ -0.45
USF1-201ENST00000368019 LMCD1Q9NZU5 365 aa12.24□□□□□ -0.45
USF1-201ENST00000368019 SUFUQ9UMX1 484 aa12.24□□□□□ -0.45
USF1-201ENST00000368019 IGSF9BQ9UPX0 1349 aa12.24□□□□□ -0.45
USF1-201ENST00000368019 USP15Q9Y4E8 981 aaPredicted RBP12.24□□□□□ -0.45
USF1-201ENST00000368019 PCDHB13Q9Y5F0 798 aa12.24□□□□□ -0.45
USF1-201ENST00000368019 GJB5O95377 273 aa12.23□□□□□ -0.45
USF1-201ENST00000368019 SHBGP04278 402 aa12.23□□□□□ -0.45
USF1-201ENST00000368019 ZNF286BP0CG31 522 aa12.23□□□□□ -0.45
USF1-201ENST00000368019 TGFB3P10600 412 aa12.23□□□□□ -0.45
USF1-201ENST00000368019 NQO1P15559 274 aaKnown RBP12.23□□□□□ -0.45
USF1-201ENST00000368019 HOXC8P31273 242 aa12.23□□□□□ -0.45
USF1-201ENST00000368019 COILP38432 576 aaPredicted RBP12.23□□□□□ -0.45
USF1-201ENST00000368019 RPL21P46778 160 aaKnown RBP12.23□□□□□ -0.45
USF1-201ENST00000368019 PEX5P50542 639 aa12.23□□□□□ -0.45
USF1-201ENST00000368019 CCNG1P51959 295 aa12.23□□□□□ -0.45
USF1-201ENST00000368019 PLTPP55058 493 aa12.23□□□□□ -0.45
USF1-201ENST00000368019 ERVK-21P61565 698 aa12.23□□□□□ -0.45
USF1-201ENST00000368019 ZNF200P98182 395 aaPredicted RBP12.23□□□□□ -0.45
USF1-201ENST00000368019 BFSP1Q12934 665 aa12.23□□□□□ -0.45
USF1-201ENST00000368019 BNIP1Q12981 228 aa12.23□□□□□ -0.45
USF1-201ENST00000368019 PGM5Q15124 567 aa12.23□□□□□ -0.45
USF1-201ENST00000368019 PPP1R7Q15435 360 aa12.23□□□□□ -0.45
USF1-201ENST00000368019 SKIV2LQ15477 1246 aaKnown RBP12.23□□□□□ -0.45
USF1-201ENST00000368019 HSDL1Q3SXM5 330 aa12.23□□□□□ -0.45
USF1-201ENST00000368019 CMPK2Q5EBM0 449 aa12.23□□□□□ -0.45
USF1-201ENST00000368019 SPDYAQ5MJ70 313 aa12.23□□□□□ -0.45
USF1-201ENST00000368019 ZNF618Q5T7W0 954 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms