RNA–Protein interactions for RNA: ENST00000367002.4

RD3-201, Transcript of retinal degeneration 3, GUCY2D regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RD3, Length 4,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RD3-201ENST00000367002 C19orf81C9J6K1 198 aa12.02□□□□□ -0.49
RD3-201ENST00000367002 WNT7AO00755 349 aa12.02□□□□□ -0.49
RD3-201ENST00000367002 BNIP3LO60238 219 aa12.02□□□□□ -0.49
RD3-201ENST00000367002 SERPINB9P50453 376 aa12.02□□□□□ -0.49
RD3-201ENST00000367002 TMED1Q13445 227 aa12.02□□□□□ -0.49
RD3-201ENST00000367002 EFTUD2Q15029 972 aaKnown RBP eCLIP12.02□□□□□ -0.49
RD3-201ENST00000367002 ATF7IP2Q5U623 682 aa12.02□□□□□ -0.49
RD3-201ENST00000367002 KCNV1Q6PIU1 500 aa12.02□□□□□ -0.49
RD3-201ENST00000367002 MTHFD1LQ6UB35 978 aa12.02□□□□□ -0.49
RD3-201ENST00000367002 NT5DC3Q86UY8 548 aa12.02□□□□□ -0.49
RD3-201ENST00000367002 ZNF560Q96MR9 790 aa12.02□□□□□ -0.49
RD3-201ENST00000367002 FAM111AQ96PZ2 611 aa12.02□□□□□ -0.49
RD3-201ENST00000367002 MAGEB5Q9BZ81 275 aa12.02□□□□□ -0.49
RD3-201ENST00000367002 SPDYE2BA6NHP3 402 aa12.01□□□□□ -0.49
RD3-201ENST00000367002 ENO4A6NNW6 628 aa12.01□□□□□ -0.49
RD3-201ENST00000367002 NEMP1O14524 444 aa12.01□□□□□ -0.49
RD3-201ENST00000367002 UBOX5O94941 541 aa12.01□□□□□ -0.49
RD3-201ENST00000367002 MYL3P08590 195 aa12.01□□□□□ -0.49
RD3-201ENST00000367002 SPDYE6P0CI01 402 aa12.01□□□□□ -0.49
RD3-201ENST00000367002 STIP1P31948 543 aaKnown RBP12.01□□□□□ -0.49
RD3-201ENST00000367002 KDELC2Q7Z4H8 507 aa12.01□□□□□ -0.49
RD3-201ENST00000367002 RDM1Q8NG50 284 aa12.01□□□□□ -0.49
RD3-201ENST00000367002 RBM46Q8TBY0 533 aaKnown RBP12.01□□□□□ -0.49
RD3-201ENST00000367002 PDCD6IPQ8WUM4 868 aaKnown RBP12.01□□□□□ -0.49
RD3-201ENST00000367002 E2F7Q96AV8 911 aa12.01□□□□□ -0.49
RD3-201ENST00000367002 NRBF2Q96F24 287 aa12.01□□□□□ -0.49
RD3-201ENST00000367002 SLC4A9Q96Q91 983 aa12.01□□□□□ -0.49
RD3-201ENST00000367002 SMARCAD1Q9H4L7 1026 aa12.01□□□□□ -0.49
RD3-201ENST00000367002 PCDHGC5Q9Y5F6 944 aa12.01□□□□□ -0.49
RD3-201ENST00000367002 SPATA31D1Q6ZQQ2 1576 aa12.01□□□□□ -0.49
RD3-201ENST00000367002 RNF225M0QZC1 329 aaPredicted RBP12.01□□□□□ -0.49
RD3-201ENST00000367002 RFC5P40937 340 aa12.01□□□□□ -0.49
RD3-201ENST00000367002 KCNA1Q09470 495 aa12.01□□□□□ -0.49
RD3-201ENST00000367002 MED21Q13503 144 aa12.01□□□□□ -0.49
RD3-201ENST00000367002 MYBPC2Q14324 1141 aa12.01□□□□□ -0.49
RD3-201ENST00000367002 CDC26Q8NHZ8 85 aa12.01□□□□□ -0.49
RD3-201ENST00000367002 SPATA20Q8TB22 786 aa12.01□□□□□ -0.49
RD3-201ENST00000367002 MTMR9Q96QG7 549 aa12.01□□□□□ -0.49
RD3-201ENST00000367002 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.01□□□□□ -0.49
RD3-201ENST00000367002 DDX20Q9UHI6 824 aaKnown RBP12.01□□□□□ -0.49
RD3-201ENST00000367002 TMX2Q9Y320 296 aa12.01□□□□□ -0.49
RD3-201ENST00000367002 NFIBO00712 420 aa12.01□□□□□ -0.49
RD3-201ENST00000367002 SLITRK3O94933 977 aa12.01□□□□□ -0.49
RD3-201ENST00000367002 MYBL2P10244 700 aa12.01□□□□□ -0.49
RD3-201ENST00000367002 XPAP23025 273 aaPredicted RBP12.01□□□□□ -0.49
RD3-201ENST00000367002 CAP2P40123 477 aa12.01□□□□□ -0.49
RD3-201ENST00000367002 RARS2Q5T160 578 aaKnown RBP12.01□□□□□ -0.49
RD3-201ENST00000367002 IER5Q5VY09 327 aa12.01□□□□□ -0.49
RD3-201ENST00000367002 NLRP9Q7RTR0 991 aa12.01□□□□□ -0.49
RD3-201ENST00000367002 THEM5Q8N1Q8 247 aa12.01□□□□□ -0.49
RD3-201ENST00000367002 DEFB129Q9H1M3 183 aa12.01□□□□□ -0.49
RD3-201ENST00000367002 MRPL40Q9NQ50 206 aaKnown RBP12.01□□□□□ -0.49
RD3-201ENST00000367002 METTL5Q9NRN9 209 aaKnown RBP12.01□□□□□ -0.49
RD3-201ENST00000367002 HAO1Q9UJM8 370 aa12.01□□□□□ -0.49
RD3-201ENST00000367002 PSTPIP1O43586 416 aa12□□□□□ -0.49
RD3-201ENST00000367002 PROSCO94903 275 aa12□□□□□ -0.49
RD3-201ENST00000367002 RARBP10826 455 aa12□□□□□ -0.49
RD3-201ENST00000367002 PYGMP11217 842 aa12□□□□□ -0.49
RD3-201ENST00000367002 GNAT1P11488 350 aa12□□□□□ -0.49
RD3-201ENST00000367002 NQO1P15559 274 aaKnown RBP12□□□□□ -0.49
RD3-201ENST00000367002 HSD17B4P51659 736 aa12□□□□□ -0.49
RD3-201ENST00000367002 TPI1P60174 286 aa12□□□□□ -0.49
RD3-201ENST00000367002 ITIH4Q14624 930 aa12□□□□□ -0.49
RD3-201ENST00000367002 BOLA3Q53S33 107 aa12□□□□□ -0.49
RD3-201ENST00000367002 GPRASP2Q96D09 838 aa12□□□□□ -0.49
RD3-201ENST00000367002 NSL1Q96IY1 281 aa12□□□□□ -0.49
RD3-201ENST00000367002 EPAS1Q99814 870 aa12□□□□□ -0.49
RD3-201ENST00000367002 HEY2Q9UBP5 337 aa12□□□□□ -0.49
RD3-201ENST00000367002 ZBTB39O15060 712 aa12□□□□□ -0.49
RD3-201ENST00000367002 IL1R1P14778 569 aa12□□□□□ -0.49
RD3-201ENST00000367002 RARRES1P49788 294 aa12□□□□□ -0.49
RD3-201ENST00000367002 TSPY1Q01534 308 aa12□□□□□ -0.49
RD3-201ENST00000367002 IL17AQ16552 155 aa12□□□□□ -0.49
RD3-201ENST00000367002 KYAT1Q16773 422 aa12□□□□□ -0.49
RD3-201ENST00000367002 LRRC55Q6ZSA7 311 aa12□□□□□ -0.49
RD3-201ENST00000367002 ING2Q9H160 280 aa12□□□□□ -0.49
RD3-201ENST00000367002 GRID1Q9ULK0 1009 aa12□□□□□ -0.49
RD3-201ENST00000367002 E2F8A0AVK6 867 aa12□□□□□ -0.49
RD3-201ENST00000367002 ASB14A6NK59 587 aa12□□□□□ -0.49
RD3-201ENST00000367002 ZBBXA8MT70 800 aa12□□□□□ -0.49
RD3-201ENST00000367002 ENO3P13929 434 aaPredicted RBP12□□□□□ -0.49
RD3-201ENST00000367002 GPD1P21695 349 aa12□□□□□ -0.49
RD3-201ENST00000367002 GARTP22102 1010 aa12□□□□□ -0.49
RD3-201ENST00000367002 IFI35P80217 286 aaPredicted RBP12□□□□□ -0.49
RD3-201ENST00000367002 NSUN2Q08J23 767 aaKnown RBP eCLIP12□□□□□ -0.49
RD3-201ENST00000367002 TRIP10Q15642 601 aa12□□□□□ -0.49
RD3-201ENST00000367002 MIIPQ5JXC2 388 aa12□□□□□ -0.49
RD3-201ENST00000367002 TMC2Q8TDI7 906 aa12□□□□□ -0.49
RD3-201ENST00000367002 TATDN2Q93075 761 aa12□□□□□ -0.49
RD3-201ENST00000367002 TMEM121Q9BTD3 319 aa12□□□□□ -0.49
RD3-201ENST00000367002 SPON2Q9BUD6 331 aa12□□□□□ -0.49
RD3-201ENST00000367002 DDX4Q9NQI0 724 aaKnown RBP12□□□□□ -0.49
RD3-201ENST00000367002 WARS2Q9UGM6 360 aaKnown RBP12□□□□□ -0.49
RD3-201ENST00000367002 PIN4Q9Y237 131 aaKnown RBP12□□□□□ -0.49
RD3-201ENST00000367002 C3orf70A6NLC5 250 aaPredicted RBP12□□□□□ -0.49
RD3-201ENST00000367002 EML1O00423 815 aa12□□□□□ -0.49
RD3-201ENST00000367002 CCNG2Q16589 344 aa12□□□□□ -0.49
RD3-201ENST00000367002 TFDP3Q5H9I0 405 aa12□□□□□ -0.49
RD3-201ENST00000367002 C11orf63Q6NUN7 778 aa12□□□□□ -0.49
RD3-201ENST00000367002 OTOP1Q7RTM1 612 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms