RNA–Protein interactions for RNA: ENST00000366595.7

NID1-202, Transcript of nidogen 1, humanhuman

TSL 1 (best) BASIC

Gene NID1, Length 5,412 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NID1-202ENST00000366595 PTRHD1Q6GMV3 140 aaKnown RBP17.46■□□□□ 0.39
NID1-202ENST00000366595 TAF2Q6P1X5 1199 aa17.46■□□□□ 0.39
NID1-202ENST00000366595 C16orf62Q7Z3J2 963 aa17.46■□□□□ 0.39
NID1-202ENST00000366595 KRT77Q7Z794 578 aa17.46■□□□□ 0.39
NID1-202ENST00000366595 ASZ1Q8WWH4 475 aa17.46■□□□□ 0.39
NID1-202ENST00000366595 PTPRKQ15262 1439 aa17.46■□□□□ 0.38
NID1-202ENST00000366595 SLCO1B7G3V0H7 640 aa17.46■□□□□ 0.38
NID1-202ENST00000366595 PRR29P0C7W0 189 aa17.46■□□□□ 0.38
NID1-202ENST00000366595 PIK3R1P27986 724 aa17.46■□□□□ 0.38
NID1-202ENST00000366595 ATP2C1P98194 919 aaPredicted RBP17.46■□□□□ 0.38
NID1-202ENST00000366595 TRIM25Q14258 630 aaKnown RBP17.46■□□□□ 0.38
NID1-202ENST00000366595 NAA30Q147X3 362 aaPredicted RBP17.46■□□□□ 0.38
NID1-202ENST00000366595 PLEKHA7Q6IQ23 1121 aa17.46■□□□□ 0.38
NID1-202ENST00000366595 C11orf88Q6PI97 169 aa17.46■□□□□ 0.38
NID1-202ENST00000366595 CLEC17AQ6ZS10 378 aa17.46■□□□□ 0.38
NID1-202ENST00000366595 ARHGAP27Q6ZUM4 889 aa17.46■□□□□ 0.38
NID1-202ENST00000366595 CACNA2D2Q9NY47 1150 aa17.46■□□□□ 0.38
NID1-202ENST00000366595 UBA2Q9UBT2 640 aaPredicted RBP17.46■□□□□ 0.38
NID1-202ENST00000366595 LOC102724428A0A0B4J2F2 783 aa17.45■□□□□ 0.38
NID1-202ENST00000366595 GLRA3O75311 464 aa17.45■□□□□ 0.38
NID1-202ENST00000366595 MED26O95402 600 aa17.45■□□□□ 0.38
NID1-202ENST00000366595 ASMTLO95671 621 aa17.45■□□□□ 0.38
NID1-202ENST00000366595 PDGFRAP16234 1089 aa17.45■□□□□ 0.38
NID1-202ENST00000366595 GALCP54803 685 aa17.45■□□□□ 0.38
NID1-202ENST00000366595 SIK1P57059 783 aa17.45■□□□□ 0.38
NID1-202ENST00000366595 POU4F1Q01851 419 aa17.45■□□□□ 0.38
NID1-202ENST00000366595 HAUS6Q7Z4H7 955 aa17.45■□□□□ 0.38
NID1-202ENST00000366595 TRMT2AQ8IZ69 625 aaKnown RBP17.45■□□□□ 0.38
NID1-202ENST00000366595 ZIM3Q96PE6 472 aa17.45■□□□□ 0.38
NID1-202ENST00000366595 CYP39A1Q9NYL5 469 aa17.45■□□□□ 0.38
NID1-202ENST00000366595 CYP26A1O43174 497 aa17.45■□□□□ 0.38
NID1-202ENST00000366595 TRAPPC3O43617 180 aa17.45■□□□□ 0.38
NID1-202ENST00000366595 SARSP49591 514 aaKnown RBP17.45■□□□□ 0.38
NID1-202ENST00000366595 INAQ16352 499 aa17.45■□□□□ 0.38
NID1-202ENST00000366595 BNC2Q6ZN30 1099 aaPredicted RBP17.45■□□□□ 0.38
NID1-202ENST00000366595 KRT74Q7RTS7 529 aa17.45■□□□□ 0.38
NID1-202ENST00000366595 KLHL4Q9C0H6 718 aa17.45■□□□□ 0.38
NID1-202ENST00000366595 RNPEPQ9H4A4 650 aa17.45■□□□□ 0.38
NID1-202ENST00000366595 GOLPH3Q9H4A6 298 aa17.45■□□□□ 0.38
NID1-202ENST00000366595 SERHL2Q9H4I8 314 aa17.45■□□□□ 0.38
NID1-202ENST00000366595 SERHLQ9NQF3 203 aa17.45■□□□□ 0.38
NID1-202ENST00000366595 BARHL2Q9NY43 387 aa17.45■□□□□ 0.38
NID1-202ENST00000366595 TMEM253P0C7T8 217 aa17.45■□□□□ 0.38
NID1-202ENST00000366595 CRKLP46109 303 aaKnown RBP17.45■□□□□ 0.38
NID1-202ENST00000366595 SVOPQ8N4V2 548 aa17.45■□□□□ 0.38
NID1-202ENST00000366595 SPATA2Q9UM82 520 aa17.45■□□□□ 0.38
NID1-202ENST00000366595 VWA5AO00534 786 aa17.45■□□□□ 0.38
NID1-202ENST00000366595 FNTAP49354 379 aa17.45■□□□□ 0.38
NID1-202ENST00000366595 ITGA1P56199 1179 aa17.45■□□□□ 0.38
NID1-202ENST00000366595 ST8SIA6P61647 398 aa17.45■□□□□ 0.38
NID1-202ENST00000366595 TAB1Q15750 504 aa17.45■□□□□ 0.38
NID1-202ENST00000366595 TTLL9Q3SXZ7 439 aa17.45■□□□□ 0.38
NID1-202ENST00000366595 OR8H2Q8N162 312 aa17.45■□□□□ 0.38
NID1-202ENST00000366595 QKIQ96PU8 341 aaKnown RBP eCLIP17.45■□□□□ 0.385e-8■□□□□ 9
NID1-202ENST00000366595 ZNF341Q9BYN7 854 aa17.45■□□□□ 0.38
NID1-202ENST00000366595 PIH1D3Q9NQM4 214 aaKnown RBP17.45■□□□□ 0.38
NID1-202ENST00000366595 STON1Q9Y6Q2 735 aa17.45■□□□□ 0.38
NID1-202ENST00000366595 A0A1W2PQJ5 194 aa17.44■□□□□ 0.38
NID1-202ENST00000366595 PRR23AA6NEV1 266 aa17.44■□□□□ 0.38
NID1-202ENST00000366595 ALDH1A1P00352 501 aa17.44■□□□□ 0.38
NID1-202ENST00000366595 ACADSBP45954 432 aa17.44■□□□□ 0.38
NID1-202ENST00000366595 ARL4DP49703 201 aa17.44■□□□□ 0.38
NID1-202ENST00000366595 PTPN12Q05209 780 aaKnown RBP17.44■□□□□ 0.38
NID1-202ENST00000366595 FAM180AQ6UWF9 173 aa17.44■□□□□ 0.38
NID1-202ENST00000366595 KIF12Q96FN5 646 aa17.44■□□□□ 0.38
NID1-202ENST00000366595 POTEFA5A3E0 1075 aa17.44■□□□□ 0.38
NID1-202ENST00000366595 CDH24Q86UP0 819 aa17.44■□□□□ 0.38
NID1-202ENST00000366595 ZNF677Q86XU0 584 aa17.44■□□□□ 0.38
NID1-202ENST00000366595 SCUBE1Q8IWY4 988 aa17.44■□□□□ 0.38
NID1-202ENST00000366595 TMEM47Q9BQJ4 181 aa17.44■□□□□ 0.38
NID1-202ENST00000366595 THUMPD3Q9BV44 507 aaKnown RBP17.44■□□□□ 0.38
NID1-202ENST00000366595 CATSPERBQ9H7T0 1116 aa17.44■□□□□ 0.38
NID1-202ENST00000366595 RGS18Q9NS28 235 aa17.44■□□□□ 0.38
NID1-202ENST00000366595 UBN2Q6ZU65 1347 aa17.44■□□□□ 0.38
NID1-202ENST00000366595 ZC3H4Q9UPT8 1303 aaKnown RBP17.44■□□□□ 0.38
NID1-202ENST00000366595 AATKQ6ZMQ8 1374 aa17.44■□□□□ 0.38
NID1-202ENST00000366595 LOC100653049A0A140TA62 436 aa17.44■□□□□ 0.38
NID1-202ENST00000366595 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.44■□□□□ 0.38
NID1-202ENST00000366595 BIRC5O15392 142 aa17.44■□□□□ 0.38
NID1-202ENST00000366595 KRT34O76011 436 aa17.44■□□□□ 0.38
NID1-202ENST00000366595 SERPINB8P50452 374 aa17.44■□□□□ 0.38
NID1-202ENST00000366595 SNX17Q15036 470 aa17.44■□□□□ 0.38
NID1-202ENST00000366595 NEK10Q6ZWH5 1172 aa17.44■□□□□ 0.38
NID1-202ENST00000366595 HPS3Q969F9 1004 aa17.44■□□□□ 0.38
NID1-202ENST00000366595 VPS33AQ96AX1 596 aa17.44■□□□□ 0.38
NID1-202ENST00000366595 RNFT2Q96EX2 444 aa17.44■□□□□ 0.38
NID1-202ENST00000366595 LXNQ9BS40 222 aa17.44■□□□□ 0.38
NID1-202ENST00000366595 ZFYVE1Q9HBF4 777 aa17.44■□□□□ 0.38
NID1-202ENST00000366595 EEF2KO00418 725 aaKnown RBP17.44■□□□□ 0.38
NID1-202ENST00000366595 CYP2E1P05181 493 aaPredicted RBP17.44■□□□□ 0.38
NID1-202ENST00000366595 FYNP06241 537 aa17.44■□□□□ 0.38
NID1-202ENST00000366595 CALB2P22676 271 aa17.44■□□□□ 0.38
NID1-202ENST00000366595 COX10Q12887 443 aa17.44■□□□□ 0.38
NID1-202ENST00000366595 MMRN1Q13201 1228 aa17.44■□□□□ 0.38
NID1-202ENST00000366595 ARHGEF7Q14155 803 aa17.44■□□□□ 0.38
NID1-202ENST00000366595 UBXN6Q9BZV1 441 aa17.44■□□□□ 0.38
NID1-202ENST00000366595 ENOPH1Q9UHY7 261 aa17.44■□□□□ 0.38
NID1-202ENST00000366595 RAPGEF6Q8TEU7 1601 aa17.44■□□□□ 0.38
NID1-202ENST00000366595 LCP1P13796 627 aa17.43■□□□□ 0.38
NID1-202ENST00000366595 MAGEA10P43363 369 aaPredicted RBP17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms