RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 PAFAH2Q99487 392 aa14.6□□□□□ -0.07
COL6A1-201ENST00000361866 DCLK3Q9C098 648 aa14.6□□□□□ -0.07
COL6A1-201ENST00000361866 PFDN4Q9NQP4 134 aa14.6□□□□□ -0.07
COL6A1-201ENST00000361866 RHBDL3P58872 404 aa14.59□□□□□ -0.07
COL6A1-201ENST00000361866 TFDP1Q14186 410 aa14.59□□□□□ -0.07
COL6A1-201ENST00000361866 DUOXA2Q1HG44 320 aa14.59□□□□□ -0.07
COL6A1-201ENST00000361866 SNX30Q5VWJ9 437 aa14.59□□□□□ -0.07
COL6A1-201ENST00000361866 EMC1Q8N766 993 aa14.59□□□□□ -0.07
COL6A1-201ENST00000361866 RNF169Q8NCN4 708 aa14.59□□□□□ -0.07
COL6A1-201ENST00000361866 ZSWIM2Q8NEG5 633 aa14.59□□□□□ -0.07
COL6A1-201ENST00000361866 ATXN2LQ8WWM7 1075 aaKnown RBP14.59□□□□□ -0.07
COL6A1-201ENST00000361866 TAAR1Q96RJ0 339 aa14.59□□□□□ -0.07
COL6A1-201ENST00000361866 RIT2Q99578 217 aa14.59□□□□□ -0.07
COL6A1-201ENST00000361866 DNPEPQ9ULA0 475 aa14.59□□□□□ -0.07
COL6A1-201ENST00000361866 PDGFRAP16234 1089 aa14.59□□□□□ -0.07
COL6A1-201ENST00000361866 ADRA2BP18089 450 aa14.59□□□□□ -0.07
COL6A1-201ENST00000361866 BGNP21810 368 aa14.59□□□□□ -0.07
COL6A1-201ENST00000361866 CHRNA5P30532 468 aa14.59□□□□□ -0.07
COL6A1-201ENST00000361866 HHIPL2Q6UWX4 724 aa14.59□□□□□ -0.07
COL6A1-201ENST00000361866 ACTL9Q8TC94 416 aa14.59□□□□□ -0.07
COL6A1-201ENST00000361866 PAPOLBQ9NRJ5 636 aaKnown RBP14.59□□□□□ -0.07
COL6A1-201ENST00000361866 DDX56Q9NY93 547 aaKnown RBP14.59□□□□□ -0.07
COL6A1-201ENST00000361866 EPS15L1Q9UBC2 864 aa14.59□□□□□ -0.07
COL6A1-201ENST00000361866 SDC4P31431 198 aa14.59□□□□□ -0.07
COL6A1-201ENST00000361866 CIITAP33076 1130 aa14.59□□□□□ -0.07
COL6A1-201ENST00000361866 MMP13P45452 471 aa14.59□□□□□ -0.07
COL6A1-201ENST00000361866 RPS6P62753 249 aaKnown RBP14.59□□□□□ -0.07
COL6A1-201ENST00000361866 OTUD4Q01804 1114 aaKnown RBP14.59□□□□□ -0.07
COL6A1-201ENST00000361866 DDR1Q08345 913 aa14.59□□□□□ -0.07
COL6A1-201ENST00000361866 GADL1Q6ZQY3 521 aa14.59□□□□□ -0.07
COL6A1-201ENST00000361866 RNF149Q8NC42 400 aa14.59□□□□□ -0.07
COL6A1-201ENST00000361866 TCP10LQ8TDR4 215 aa14.59□□□□□ -0.07
COL6A1-201ENST00000361866 NSUN6Q8TEA1 469 aaKnown RBP14.59□□□□□ -0.07
COL6A1-201ENST00000361866 MEIS2O14770 477 aa14.58□□□□□ -0.07
COL6A1-201ENST00000361866 ATP6V1B1P15313 513 aa14.58□□□□□ -0.07
COL6A1-201ENST00000361866 TCN1P20061 433 aaPredicted RBP14.58□□□□□ -0.07
COL6A1-201ENST00000361866 NCALDP61601 193 aa14.58□□□□□ -0.07
COL6A1-201ENST00000361866 LRRC57Q8N9N7 239 aa14.58□□□□□ -0.07
COL6A1-201ENST00000361866 ICA1LQ8NDH6 482 aa14.58□□□□□ -0.07
COL6A1-201ENST00000361866 CKAP2Q8WWK9 683 aa14.58□□□□□ -0.07
COL6A1-201ENST00000361866 KIAA1683Q9H0B3 1180 aa14.58□□□□□ -0.07
COL6A1-201ENST00000361866 AS3MTQ9HBK9 375 aa14.58□□□□□ -0.07
COL6A1-201ENST00000361866 KCNMB3Q9NPA1 279 aa14.58□□□□□ -0.07
COL6A1-201ENST00000361866 GGA2Q9UJY4 613 aa14.58□□□□□ -0.07
COL6A1-201ENST00000361866 CREB3O43889 395 aa14.58□□□□□ -0.08
COL6A1-201ENST00000361866 PPP1R11O60927 126 aaPredicted RBP14.58□□□□□ -0.08
COL6A1-201ENST00000361866 DGAT1O75907 488 aa14.58□□□□□ -0.08
COL6A1-201ENST00000361866 PROSCO94903 275 aa14.58□□□□□ -0.08
COL6A1-201ENST00000361866 NUDT17P0C025 328 aa14.58□□□□□ -0.08
COL6A1-201ENST00000361866 SPATA31C1P0DKV0 1188 aa14.58□□□□□ -0.08
COL6A1-201ENST00000361866 SERPINB3P29508 390 aa14.58□□□□□ -0.08
COL6A1-201ENST00000361866 CASP2P42575 452 aa14.58□□□□□ -0.08
COL6A1-201ENST00000361866 MOXD1Q6UVY6 613 aa14.58□□□□□ -0.08
COL6A1-201ENST00000361866 RIBC1Q8N443 379 aaPredicted RBP14.58□□□□□ -0.08
COL6A1-201ENST00000361866 E2F7Q96AV8 911 aa14.58□□□□□ -0.08
COL6A1-201ENST00000361866 ADA2Q9NZK5 511 aa14.58□□□□□ -0.08
COL6A1-201ENST00000361866 MTO1Q9Y2Z2 717 aaKnown RBP14.58□□□□□ -0.08
COL6A1-201ENST00000361866 NFIBO00712 420 aa14.58□□□□□ -0.08
COL6A1-201ENST00000361866 PPP1R12AO14974 1030 aaPredicted RBP14.58□□□□□ -0.08
COL6A1-201ENST00000361866 RPA3P35244 121 aaPredicted RBP14.58□□□□□ -0.08
COL6A1-201ENST00000361866 XRCC4Q13426 336 aa14.58□□□□□ -0.08
COL6A1-201ENST00000361866 BMPR2Q13873 1038 aa14.58□□□□□ -0.08
COL6A1-201ENST00000361866 SLC35G1Q2M3R5 365 aa14.58□□□□□ -0.08
COL6A1-201ENST00000361866 ASTE1Q2TB18 679 aaPredicted RBP14.58□□□□□ -0.08
COL6A1-201ENST00000361866 MFSD7Q6UXD7 560 aa14.58□□□□□ -0.08
COL6A1-201ENST00000361866 SPOCK2Q92563 424 aa14.58□□□□□ -0.08
COL6A1-201ENST00000361866 HDAC11Q96DB2 347 aa14.58□□□□□ -0.08
COL6A1-201ENST00000361866 PRMT6Q96LA8 375 aaPredicted RBP14.58□□□□□ -0.08
COL6A1-201ENST00000361866 TMEM39BQ9GZU3 492 aa14.58□□□□□ -0.08
COL6A1-201ENST00000361866 ZNF302Q9NR11 478 aa14.58□□□□□ -0.08
COL6A1-201ENST00000361866 KLHL8Q9P2G9 620 aaPredicted RBP14.58□□□□□ -0.08
COL6A1-201ENST00000361866 SLC12A6Q9UHW9 1150 aa14.58□□□□□ -0.08
COL6A1-201ENST00000361866 SUGT1Q9Y2Z0 365 aa14.58□□□□□ -0.08
COL6A1-201ENST00000361866 MYH8P13535 1937 aa14.58□□□□□ -0.08
COL6A1-201ENST00000361866 EN1Q05925 392 aaPredicted RBP14.58□□□□□ -0.08
COL6A1-201ENST00000361866 CCNG2Q16589 344 aa14.58□□□□□ -0.08
COL6A1-201ENST00000361866 HEATR6Q6AI08 1181 aaKnown RBP14.58□□□□□ -0.08
COL6A1-201ENST00000361866 SLC51AQ86UW1 340 aa14.58□□□□□ -0.08
COL6A1-201ENST00000361866 PDZD8Q8NEN9 1154 aa14.58□□□□□ -0.08
COL6A1-201ENST00000361866 CENPTQ96BT3 561 aa14.58□□□□□ -0.08
COL6A1-201ENST00000361866 ALKBH8Q96BT7 664 aaKnown RBP14.58□□□□□ -0.08
COL6A1-201ENST00000361866 TBC1D10AQ9BXI6 508 aa14.58□□□□□ -0.08
COL6A1-201ENST00000361866 JPH1Q9HDC5 661 aaPredicted RBP14.58□□□□□ -0.08
COL6A1-201ENST00000361866 AIM2O14862 343 aa14.57□□□□□ -0.08
COL6A1-201ENST00000361866 BANF1O75531 89 aa14.57□□□□□ -0.08
COL6A1-201ENST00000361866 NR3C2P08235 984 aa14.57□□□□□ -0.08
COL6A1-201ENST00000361866 RFC5P40937 340 aa14.57□□□□□ -0.08
COL6A1-201ENST00000361866 RARRES1P49788 294 aa14.57□□□□□ -0.08
COL6A1-201ENST00000361866 Q4G0T1 1027 aa14.57□□□□□ -0.08
COL6A1-201ENST00000361866 ZCWPW2Q504Y3 356 aa14.57□□□□□ -0.08
COL6A1-201ENST00000361866 MCOLN2Q8IZK6 566 aa14.57□□□□□ -0.08
COL6A1-201ENST00000361866 GALNT4Q8N4A0 578 aa14.57□□□□□ -0.08
COL6A1-201ENST00000361866 TEX9Q8N6V9 391 aa14.57□□□□□ -0.08
COL6A1-201ENST00000361866 SERPINI1Q99574 410 aa14.57□□□□□ -0.08
COL6A1-201ENST00000361866 KCNQ5Q9NR82 932 aa14.57□□□□□ -0.08
COL6A1-201ENST00000361866 PCDHAC2Q9Y5I4 1007 aa14.57□□□□□ -0.08
COL6A1-201ENST00000361866 COL5A2P05997 1499 aaPredicted RBP14.57□□□□□ -0.08
COL6A1-201ENST00000361866 ATP9AO75110 1047 aa14.57□□□□□ -0.08
COL6A1-201ENST00000361866 DGKIO75912 1065 aa14.57□□□□□ -0.08
COL6A1-201ENST00000361866 PYGBP11216 843 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms