RNA–Protein interactions for RNA: ENST00000360515.7

CDC42SE2-201, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 3,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-201ENST00000360515 V9GY48 417 aaPredicted RBP6.57□□□□□ -1.36
CDC42SE2-201ENST00000360515 FAM189A1O60320 539 aa6.57□□□□□ -1.36
CDC42SE2-201ENST00000360515 HMGA1P17096 107 aaKnown RBP6.57□□□□□ -1.36
CDC42SE2-201ENST00000360515 EIF2S3P41091 472 aaKnown RBP6.57□□□□□ -1.36
CDC42SE2-201ENST00000360515 VIPR2P41587 438 aa6.57□□□□□ -1.36
CDC42SE2-201ENST00000360515 KIR2DL1P43626 348 aaPredicted RBP6.57□□□□□ -1.36
CDC42SE2-201ENST00000360515 NBR1Q14596 966 aa6.57□□□□□ -1.36
CDC42SE2-201ENST00000360515 NT5DC1Q5TFE4 455 aa6.57□□□□□ -1.36
CDC42SE2-201ENST00000360515 CREB3L3Q68CJ9 461 aa6.57□□□□□ -1.36
CDC42SE2-201ENST00000360515 ARID3BQ8IVW6 561 aaPredicted RBP6.57□□□□□ -1.36
CDC42SE2-201ENST00000360515 DEFB124Q8NES8 71 aa6.57□□□□□ -1.36
CDC42SE2-201ENST00000360515 MTMR9Q96QG7 549 aa6.57□□□□□ -1.36
CDC42SE2-201ENST00000360515 FNBP1Q96RU3 617 aa6.57□□□□□ -1.36
CDC42SE2-201ENST00000360515 RWDD1Q9H446 243 aaPredicted RBP6.57□□□□□ -1.36
CDC42SE2-201ENST00000360515 FAM124BQ9H5Z6 455 aaPredicted RBP6.57□□□□□ -1.36
CDC42SE2-201ENST00000360515 UBR5O95071 2799 aaPredicted RBP6.56□□□□□ -1.36
CDC42SE2-201ENST00000360515 CHD8Q9HCK8 2581 aa6.56□□□□□ -1.36
CDC42SE2-201ENST00000360515 PTPRZ1P23471 2315 aaPredicted RBP6.56□□□□□ -1.36
CDC42SE2-201ENST00000360515 ANO9A1A5B4 782 aa6.56□□□□□ -1.36
CDC42SE2-201ENST00000360515 J3QKU1 62 aa6.56□□□□□ -1.36
CDC42SE2-201ENST00000360515 DDX39AO00148 427 aaKnown RBP6.56□□□□□ -1.36
CDC42SE2-201ENST00000360515 SYPP08247 313 aa6.56□□□□□ -1.36
CDC42SE2-201ENST00000360515 CLCNKBP51801 687 aa6.56□□□□□ -1.36
CDC42SE2-201ENST00000360515 TWF1Q12792 350 aa6.56□□□□□ -1.36
CDC42SE2-201ENST00000360515 ILKQ13418 452 aa6.56□□□□□ -1.36
CDC42SE2-201ENST00000360515 LPCAT2Q7L5N7 544 aa6.56□□□□□ -1.36
CDC42SE2-201ENST00000360515 TMPRSS12Q86WS5 348 aa6.56□□□□□ -1.36
CDC42SE2-201ENST00000360515 ING5Q8WYH8 240 aa6.56□□□□□ -1.36
CDC42SE2-201ENST00000360515 PGBD1Q96JS3 809 aa6.56□□□□□ -1.36
CDC42SE2-201ENST00000360515 GABRG3Q99928 467 aa6.56□□□□□ -1.36
CDC42SE2-201ENST00000360515 RBM12Q9NTZ6 932 aaKnown RBP6.56□□□□□ -1.36
CDC42SE2-201ENST00000360515 STK24Q9Y6E0 443 aa6.56□□□□□ -1.36
CDC42SE2-201ENST00000360515 MYLKQ15746 1914 aa6.56□□□□□ -1.36
CDC42SE2-201ENST00000360515 CACNA1GO43497 2377 aa6.56□□□□□ -1.36
CDC42SE2-201ENST00000360515 GFRA2O00451 464 aa6.56□□□□□ -1.36
CDC42SE2-201ENST00000360515 PCDHGA12O60330 932 aa6.56□□□□□ -1.36
CDC42SE2-201ENST00000360515 OPHN1O60890 802 aa6.56□□□□□ -1.36
CDC42SE2-201ENST00000360515 EDN1P05305 212 aa6.56□□□□□ -1.36
CDC42SE2-201ENST00000360515 FTH1P19P0C7X4 201 aa6.56□□□□□ -1.36
CDC42SE2-201ENST00000360515 CCDC192P0DO97 292 aa6.56□□□□□ -1.36
CDC42SE2-201ENST00000360515 OPRD1P41143 372 aa6.56□□□□□ -1.36
CDC42SE2-201ENST00000360515 PPP3CCP48454 512 aa6.56□□□□□ -1.36
CDC42SE2-201ENST00000360515 EPHB3P54753 998 aa6.56□□□□□ -1.36
CDC42SE2-201ENST00000360515 IRX4P78413 519 aa6.56□□□□□ -1.36
CDC42SE2-201ENST00000360515 RHDQ02161 417 aa6.56□□□□□ -1.36
CDC42SE2-201ENST00000360515 SOX4Q06945 474 aaPredicted RBP6.56□□□□□ -1.36
CDC42SE2-201ENST00000360515 SNX30Q5VWJ9 437 aa6.56□□□□□ -1.36
CDC42SE2-201ENST00000360515 JAKMIP3Q5VZ66 844 aa6.56□□□□□ -1.36
CDC42SE2-201ENST00000360515 IL27RAQ6UWB1 636 aa6.56□□□□□ -1.36
CDC42SE2-201ENST00000360515 NAXDQ8IW45 347 aa6.56□□□□□ -1.36
CDC42SE2-201ENST00000360515 TTC9Q92623 222 aa6.56□□□□□ -1.36
CDC42SE2-201ENST00000360515 CEP170P1Q96L14 293 aa6.56□□□□□ -1.36
CDC42SE2-201ENST00000360515 PPP1R16BQ96T49 567 aa6.56□□□□□ -1.36
CDC42SE2-201ENST00000360515 CORO1BQ9BR76 489 aa6.56□□□□□ -1.36
CDC42SE2-201ENST00000360515 LXNQ9BS40 222 aa6.56□□□□□ -1.36
CDC42SE2-201ENST00000360515 ARHGAP28Q9P2N2 729 aa6.56□□□□□ -1.36
CDC42SE2-201ENST00000360515 ARHGAP26Q9UNA1 814 aa6.56□□□□□ -1.36
CDC42SE2-201ENST00000360515 GPR179Q6PRD1 2367 aa6.56□□□□□ -1.36
CDC42SE2-201ENST00000360515 PODXLO00592 558 aa6.56□□□□□ -1.36
CDC42SE2-201ENST00000360515 NPC1O15118 1278 aa6.56□□□□□ -1.36
CDC42SE2-201ENST00000360515 CSDE1O75534 798 aaKnown RBP6.56□□□□□ -1.36
CDC42SE2-201ENST00000360515 GJA4P35212 333 aa6.56□□□□□ -1.36
CDC42SE2-201ENST00000360515 GALK1P51570 392 aa6.56□□□□□ -1.36
CDC42SE2-201ENST00000360515 KPNA1P52294 538 aaPredicted RBP6.56□□□□□ -1.36
CDC42SE2-201ENST00000360515 PPP2R5AQ15172 486 aa6.56□□□□□ -1.36
CDC42SE2-201ENST00000360515 PTPRNQ16849 979 aa6.56□□□□□ -1.36
CDC42SE2-201ENST00000360515 KRTAP21-3Q3LHN1 58 aa6.56□□□□□ -1.36
CDC42SE2-201ENST00000360515 TCEAL6Q6IPX3 200 aa6.56□□□□□ -1.36
CDC42SE2-201ENST00000360515 RNF19BQ6ZMZ0 732 aa6.56□□□□□ -1.36
CDC42SE2-201ENST00000360515 KANSL1Q7Z3B3 1105 aa6.56□□□□□ -1.36
CDC42SE2-201ENST00000360515 CD302Q8IX05 232 aa6.56□□□□□ -1.36
CDC42SE2-201ENST00000360515 YAF2Q8IY57 180 aa6.56□□□□□ -1.36
CDC42SE2-201ENST00000360515 RBBP8NLQ8NC74 664 aaPredicted RBP6.56□□□□□ -1.36
CDC42SE2-201ENST00000360515 WHAMMQ8TF30 809 aa6.56□□□□□ -1.36
CDC42SE2-201ENST00000360515 ATP2A3Q93084 1043 aa6.56□□□□□ -1.36
CDC42SE2-201ENST00000360515 TCEAL3Q969E4 200 aa6.56□□□□□ -1.36
CDC42SE2-201ENST00000360515 CPB2Q96IY4 423 aa6.56□□□□□ -1.36
CDC42SE2-201ENST00000360515 TTLL2Q9BWV7 592 aa6.56□□□□□ -1.36
CDC42SE2-201ENST00000360515 SUSD2Q9UGT4 822 aa6.56□□□□□ -1.36
CDC42SE2-201ENST00000360515 KCNG1Q9UIX4 513 aa6.56□□□□□ -1.36
CDC42SE2-201ENST00000360515 MTMR11A4FU01 709 aa6.55□□□□□ -1.36
CDC42SE2-201ENST00000360515 MARCH6O60337 910 aa6.55□□□□□ -1.36
CDC42SE2-201ENST00000360515 HAPLN1P10915 354 aaPredicted RBP6.55□□□□□ -1.36
CDC42SE2-201ENST00000360515 TUFMP49411 452 aaKnown RBP6.55□□□□□ -1.36
CDC42SE2-201ENST00000360515 NLRP12P59046 1061 aa6.55□□□□□ -1.36
CDC42SE2-201ENST00000360515 CRY1Q16526 586 aa6.55□□□□□ -1.36
CDC42SE2-201ENST00000360515 TBCKQ8TEA7 893 aa6.55□□□□□ -1.36
CDC42SE2-201ENST00000360515 USP13Q92995 863 aaPredicted RBP6.55□□□□□ -1.36
CDC42SE2-201ENST00000360515 RILPL2Q969X0 211 aa6.55□□□□□ -1.36
CDC42SE2-201ENST00000360515 SPATA17Q96L03 361 aa6.55□□□□□ -1.36
CDC42SE2-201ENST00000360515 ACO2Q99798 780 aaKnown RBP6.55□□□□□ -1.36
CDC42SE2-201ENST00000360515 POLMQ9NP87 494 aaPredicted RBP6.55□□□□□ -1.36
CDC42SE2-201ENST00000360515 DSEQ9UL01 958 aa6.55□□□□□ -1.36
CDC42SE2-201ENST00000360515 HOXC11O43248 304 aaPredicted RBP6.55□□□□□ -1.36
CDC42SE2-201ENST00000360515 B4GALT5O43286 388 aa6.55□□□□□ -1.36
CDC42SE2-201ENST00000360515 PLXNA2O75051 1894 aa6.55□□□□□ -1.36
CDC42SE2-201ENST00000360515 ALDH1A2O94788 518 aa6.55□□□□□ -1.36
CDC42SE2-201ENST00000360515 PRAMEF12O95522 483 aa6.55□□□□□ -1.36
CDC42SE2-201ENST00000360515 BCKDHBP21953 392 aa6.55□□□□□ -1.36
CDC42SE2-201ENST00000360515 CA8P35219 290 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms