RNA–Protein interactions for RNA: ENST00000359785.9

PTPN22-201, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PTPN22, Length 3,654 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-201ENST00000359785 ARHGAP28Q9P2N2 729 aa4.77□□□□□ -1.65
PTPN22-201ENST00000359785 GRID1Q9ULK0 1009 aa4.77□□□□□ -1.65
PTPN22-201ENST00000359785 CHD5Q8TDI0 1954 aa4.77□□□□□ -1.65
PTPN22-201ENST00000359785 SDR42E2A6NKP2 422 aa4.77□□□□□ -1.65
PTPN22-201ENST00000359785 TBX10O75333 385 aa4.77□□□□□ -1.65
PTPN22-201ENST00000359785 ENDOD1O94919 500 aa4.77□□□□□ -1.65
PTPN22-201ENST00000359785 NTSR2O95665 410 aa4.77□□□□□ -1.65
PTPN22-201ENST00000359785 MYL3P08590 195 aa4.77□□□□□ -1.65
PTPN22-201ENST00000359785 ANPEPP15144 967 aa4.77□□□□□ -1.65
PTPN22-201ENST00000359785 ZNF24P17028 368 aa4.77□□□□□ -1.65
PTPN22-201ENST00000359785 HOXB6P17509 224 aaKnown RBP4.77□□□□□ -1.65
PTPN22-201ENST00000359785 CHN2P52757 468 aa4.77□□□□□ -1.65
PTPN22-201ENST00000359785 PRKAA2P54646 552 aa4.77□□□□□ -1.65
PTPN22-201ENST00000359785 NFIXQ14938 502 aa4.77□□□□□ -1.65
PTPN22-201ENST00000359785 KNOP1Q1ED39 458 aaKnown RBP4.77□□□□□ -1.65
PTPN22-201ENST00000359785 INSCQ1MX18 579 aa4.77□□□□□ -1.65
PTPN22-201ENST00000359785 ZC2HC1CQ53FD0 456 aaPredicted RBP4.77□□□□□ -1.65
PTPN22-201ENST00000359785 NIPAL1Q6NVV3 410 aa4.77□□□□□ -1.65
PTPN22-201ENST00000359785 FAM171BQ6P995 826 aa4.77□□□□□ -1.65
PTPN22-201ENST00000359785 TRIM72Q6ZMU5 477 aa4.77□□□□□ -1.65
PTPN22-201ENST00000359785 ZNF410Q86VK4 478 aa4.77□□□□□ -1.65
PTPN22-201ENST00000359785 LACC1Q8IV20 430 aa4.77□□□□□ -1.65
PTPN22-201ENST00000359785 SMYD4Q8IYR2 804 aaPredicted RBP4.77□□□□□ -1.65
PTPN22-201ENST00000359785 FBXO25Q8TCJ0 367 aa4.77□□□□□ -1.65
PTPN22-201ENST00000359785 TMC2Q8TDI7 906 aa4.77□□□□□ -1.65
PTPN22-201ENST00000359785 LRRC8CQ8TDW0 803 aa4.77□□□□□ -1.65
PTPN22-201ENST00000359785 FBLIM1Q8WUP2 373 aa4.77□□□□□ -1.65
PTPN22-201ENST00000359785 SCG3Q8WXD2 468 aaKnown RBP4.77□□□□□ -1.65
PTPN22-201ENST00000359785 SHC3Q92529 594 aa4.77□□□□□ -1.65
PTPN22-201ENST00000359785 HAS1Q92839 578 aa4.77□□□□□ -1.65
PTPN22-201ENST00000359785 POP5Q969H6 163 aaKnown RBP4.77□□□□□ -1.65
PTPN22-201ENST00000359785 NSUN4Q96CB9 384 aaKnown RBP4.77□□□□□ -1.65
PTPN22-201ENST00000359785 MTBPQ96DY7 904 aa4.77□□□□□ -1.65
PTPN22-201ENST00000359785 DDX27Q96GQ7 796 aaKnown RBP4.77□□□□□ -1.65
PTPN22-201ENST00000359785 SNX27Q96L92 541 aa4.77□□□□□ -1.65
PTPN22-201ENST00000359785 TGS1Q96RS0 853 aaKnown RBP4.77□□□□□ -1.65
PTPN22-201ENST00000359785 VRTNQ9H8Y1 702 aa4.77□□□□□ -1.65
PTPN22-201ENST00000359785 COG5Q9UP83 839 aa4.77□□□□□ -1.65
PTPN22-201ENST00000359785 THSD7BQ9C0I4 1608 aa4.77□□□□□ -1.65
PTPN22-201ENST00000359785 MACROD2A1Z1Q3 448 aa4.76□□□□□ -1.65
PTPN22-201ENST00000359785 DNALI1O14645 258 aaPredicted RBP4.76□□□□□ -1.65
PTPN22-201ENST00000359785 ATP9AO75110 1047 aa4.76□□□□□ -1.65
PTPN22-201ENST00000359785 ATP2C2O75185 946 aa4.76□□□□□ -1.65
PTPN22-201ENST00000359785 CAMTA2O94983 1202 aa4.76□□□□□ -1.65
PTPN22-201ENST00000359785 MBD4O95243 580 aa4.76□□□□□ -1.65
PTPN22-201ENST00000359785 TFAP2AP05549 437 aa4.76□□□□□ -1.65
PTPN22-201ENST00000359785 UNGP13051 313 aaPredicted RBP4.76□□□□□ -1.65
PTPN22-201ENST00000359785 CYP11B2P19099 503 aa4.76□□□□□ -1.65
PTPN22-201ENST00000359785 POLR2EP19388 210 aaKnown RBP4.76□□□□□ -1.65
PTPN22-201ENST00000359785 ACVR2AP27037 513 aa4.76□□□□□ -1.65
PTPN22-201ENST00000359785 RPA1P27694 616 aa4.76□□□□□ -1.65
PTPN22-201ENST00000359785 GPC3P51654 580 aa4.76□□□□□ -1.65
PTPN22-201ENST00000359785 PEX3P56589 373 aa4.76□□□□□ -1.65
PTPN22-201ENST00000359785 CABP4P57796 275 aa4.76□□□□□ -1.65
PTPN22-201ENST00000359785 IFI35P80217 286 aaPredicted RBP4.76□□□□□ -1.65
PTPN22-201ENST00000359785 MXRA7P84157 204 aa4.76□□□□□ -1.65
PTPN22-201ENST00000359785 CYP27A1Q02318 531 aa4.76□□□□□ -1.65
PTPN22-201ENST00000359785 TUBA3CQ13748 450 aa4.76□□□□□ -1.65
PTPN22-201ENST00000359785 TRADDQ15628 312 aa4.76□□□□□ -1.65
PTPN22-201ENST00000359785 HSF5Q4G112 596 aaPredicted RBP4.76□□□□□ -1.65
PTPN22-201ENST00000359785 IFIT1BQ5T764 474 aaKnown RBP4.76□□□□□ -1.65
PTPN22-201ENST00000359785 MEX3CQ5U5Q3 659 aaKnown RBP4.76□□□□□ -1.65
PTPN22-201ENST00000359785 RRAGAQ7L523 313 aa4.76□□□□□ -1.65
PTPN22-201ENST00000359785 PHLDB2Q86SQ0 1253 aa4.76□□□□□ -1.65
PTPN22-201ENST00000359785 DHDDSQ86SQ9 333 aa4.76□□□□□ -1.65
PTPN22-201ENST00000359785 CCDC125Q86Z20 511 aa4.76□□□□□ -1.65
PTPN22-201ENST00000359785 EXD1Q8NHP7 514 aa4.76□□□□□ -1.65
PTPN22-201ENST00000359785 ANGPTL6Q8NI99 470 aa4.76□□□□□ -1.65
PTPN22-201ENST00000359785 FNIP1Q8TF40 1166 aa4.76□□□□□ -1.65
PTPN22-201ENST00000359785 ALG3Q92685 438 aa4.76□□□□□ -1.65
PTPN22-201ENST00000359785 ZBTB9Q96C00 473 aa4.76□□□□□ -1.65
PTPN22-201ENST00000359785 CALML4Q96GE6 196 aa4.76□□□□□ -1.65
PTPN22-201ENST00000359785 FEM1CQ96JP0 617 aa4.76□□□□□ -1.65
PTPN22-201ENST00000359785 CFAP57Q96MR6 1250 aa4.76□□□□□ -1.65
PTPN22-201ENST00000359785 EYA3Q99504 573 aa4.76□□□□□ -1.65
PTPN22-201ENST00000359785 ZC3H12CQ9C0D7 883 aaKnown RBP4.76□□□□□ -1.65
PTPN22-201ENST00000359785 CLK4Q9HAZ1 481 aaKnown RBP4.76□□□□□ -1.65
PTPN22-201ENST00000359785 GKN1Q9NS71 199 aa4.76□□□□□ -1.65
PTPN22-201ENST00000359785 RIMS3Q9UJD0 308 aa4.76□□□□□ -1.65
PTPN22-201ENST00000359785 VAV3Q9UKW4 847 aa4.76□□□□□ -1.65
PTPN22-201ENST00000359785 PHTF1Q9UMS5 762 aa4.76□□□□□ -1.65
PTPN22-201ENST00000359785 RABGAP1Q9Y3P9 1069 aa4.76□□□□□ -1.65
PTPN22-201ENST00000359785 ST14Q9Y5Y6 855 aa4.76□□□□□ -1.65
PTPN22-201ENST00000359785 MYO16Q9Y6X6 1858 aa4.76□□□□□ -1.65
PTPN22-201ENST00000359785 SBF1O95248 1867 aa4.76□□□□□ -1.65
PTPN22-201ENST00000359785 GRXCR2A6NFK2 248 aa4.76□□□□□ -1.65
PTPN22-201ENST00000359785 H2AFYO75367 372 aaKnown RBP4.76□□□□□ -1.65
PTPN22-201ENST00000359785 ALDH1A2O94788 518 aa4.76□□□□□ -1.65
PTPN22-201ENST00000359785 STARD3NLO95772 234 aa4.76□□□□□ -1.65
PTPN22-201ENST00000359785 ERBB2P04626 1255 aa4.76□□□□□ -1.65
PTPN22-201ENST00000359785 EIF4BP23588 611 aaKnown RBP4.76□□□□□ -1.65
PTPN22-201ENST00000359785 MTIF2P46199 727 aaKnown RBP4.76□□□□□ -1.65
PTPN22-201ENST00000359785 TRPC1P48995 793 aa4.76□□□□□ -1.65
PTPN22-201ENST00000359785 RAD23BP54727 409 aa4.76□□□□□ -1.65
PTPN22-201ENST00000359785 TIMM10P62072 90 aa4.76□□□□□ -1.65
PTPN22-201ENST00000359785 KLHL30Q0D2K2 578 aa4.76□□□□□ -1.65
PTPN22-201ENST00000359785 DCTN2Q13561 401 aaKnown RBP4.76□□□□□ -1.65
PTPN22-201ENST00000359785 MAP7Q14244 749 aa4.76□□□□□ -1.65
PTPN22-201ENST00000359785 HSP90AA5PQ58FG0 334 aa4.76□□□□□ -1.65
PTPN22-201ENST00000359785 ARSHQ5FYA8 562 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms