RNA–Protein interactions for RNA: ENST00000358389.7

CNOT3-202, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 4,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-202ENST00000358389 FOXR2Q6PJQ5 311 aa12.02□□□□□ -0.48
CNOT3-202ENST00000358389 CNBD2Q96M20 576 aa12.02□□□□□ -0.48
CNOT3-202ENST00000358389 KLHL4Q9C0H6 718 aa12.02□□□□□ -0.48
CNOT3-202ENST00000358389 NUMBLQ9Y6R0 609 aa12.02□□□□□ -0.48
CNOT3-202ENST00000358389 BAZ2AQ9UIF9 1905 aaKnown RBP12.02□□□□□ -0.48
CNOT3-202ENST00000358389 MAGEB2O15479 319 aa12.02□□□□□ -0.49
CNOT3-202ENST00000358389 GAS7O60861 476 aa12.02□□□□□ -0.49
CNOT3-202ENST00000358389 CALCAP01258 141 aa12.02□□□□□ -0.49
CNOT3-202ENST00000358389 VCLP18206 1134 aa12.02□□□□□ -0.49
CNOT3-202ENST00000358389 SSTR1P30872 391 aa12.02□□□□□ -0.49
CNOT3-202ENST00000358389 NCOA4Q13772 614 aa12.02□□□□□ -0.49
CNOT3-202ENST00000358389 EFTUD2Q15029 972 aaKnown RBP eCLIP12.02□□□□□ -0.491e-6■■■■■ 28.5
CNOT3-202ENST00000358389 CYTH1Q15438 398 aa12.02□□□□□ -0.49
CNOT3-202ENST00000358389 CCDC92Q53HC0 331 aaPredicted RBP12.02□□□□□ -0.49
CNOT3-202ENST00000358389 MFSD4BQ5TF39 518 aa12.02□□□□□ -0.49
CNOT3-202ENST00000358389 SLC30A10Q6XR72 485 aa12.02□□□□□ -0.49
CNOT3-202ENST00000358389 POU5F2Q8N7G0 328 aa12.02□□□□□ -0.49
CNOT3-202ENST00000358389 FBXO27Q8NI29 283 aa12.02□□□□□ -0.49
CNOT3-202ENST00000358389 HSPBAP1Q96EW2 488 aa12.02□□□□□ -0.49
CNOT3-202ENST00000358389 TMEM117Q9H0C3 514 aa12.02□□□□□ -0.49
CNOT3-202ENST00000358389 CHD4Q14839 1912 aa12.02□□□□□ -0.49
CNOT3-202ENST00000358389 NDC80O14777 642 aa12.02□□□□□ -0.49
CNOT3-202ENST00000358389 FGFR1P11362 822 aa12.02□□□□□ -0.49
CNOT3-202ENST00000358389 SSTR3P32745 418 aaPredicted RBP12.02□□□□□ -0.49
CNOT3-202ENST00000358389 PHBP35232 272 aa12.02□□□□□ -0.49
CNOT3-202ENST00000358389 SERPINB8P50452 374 aa12.02□□□□□ -0.49
CNOT3-202ENST00000358389 MAP7D1Q3KQU3 841 aa12.02□□□□□ -0.49
CNOT3-202ENST00000358389 SYCP2LQ5T4T6 812 aa12.02□□□□□ -0.49
CNOT3-202ENST00000358389 TTBK2Q6IQ55 1244 aa12.02□□□□□ -0.49
CNOT3-202ENST00000358389 CLEC4GQ6UXB4 293 aa12.02□□□□□ -0.49
CNOT3-202ENST00000358389 ACAD11Q709F0 780 aa12.02□□□□□ -0.49
CNOT3-202ENST00000358389 SLC47A2Q86VL8 602 aa12.02□□□□□ -0.49
CNOT3-202ENST00000358389 ARHGEF19Q8IW93 802 aa12.02□□□□□ -0.49
CNOT3-202ENST00000358389 MORC4Q8TE76 937 aa12.02□□□□□ -0.49
CNOT3-202ENST00000358389 LZICQ8WZA0 190 aa12.02□□□□□ -0.49
CNOT3-202ENST00000358389 MRPL1Q9BYD6 325 aaKnown RBP12.02□□□□□ -0.49
CNOT3-202ENST00000358389 TLE6Q9H808 572 aa12.02□□□□□ -0.49
CNOT3-202ENST00000358389 SH3GLB1Q9Y371 365 aa12.02□□□□□ -0.49
CNOT3-202ENST00000358389 BOLA2-SMG1P6H3BVE0 249 aa12.01□□□□□ -0.49
CNOT3-202ENST00000358389 STAMBPO95630 424 aa12.01□□□□□ -0.49
CNOT3-202ENST00000358389 FAM163BP0C2L3 166 aa12.01□□□□□ -0.49
CNOT3-202ENST00000358389 PEX2P28328 305 aa12.01□□□□□ -0.49
CNOT3-202ENST00000358389 CHN2P52757 468 aa12.01□□□□□ -0.49
CNOT3-202ENST00000358389 ZNF200P98182 395 aaPredicted RBP12.01□□□□□ -0.49
CNOT3-202ENST00000358389 SLC25A3Q00325 362 aa12.01□□□□□ -0.49
CNOT3-202ENST00000358389 MTA1Q13330 715 aa12.01□□□□□ -0.49
CNOT3-202ENST00000358389 CYP1B1Q16678 543 aa12.01□□□□□ -0.49
CNOT3-202ENST00000358389 CC2D2BQ6DHV5 1058 aa12.01□□□□□ -0.49
CNOT3-202ENST00000358389 SYDE1Q6ZW31 735 aaPredicted RBP12.01□□□□□ -0.49
CNOT3-202ENST00000358389 PANX3Q96QZ0 392 aa12.01□□□□□ -0.49
CNOT3-202ENST00000358389 PCDHB18PQ96TA0 734 aa12.01□□□□□ -0.49
CNOT3-202ENST00000358389 ANLNQ9NQW6 1124 aa12.01□□□□□ -0.49
CNOT3-202ENST00000358389 ZNF510Q9Y2H8 683 aa12.01□□□□□ -0.49
CNOT3-202ENST00000358389 ARHGAP10A1A4S6 786 aa12.01□□□□□ -0.49
CNOT3-202ENST00000358389 PRPF4O43172 522 aaKnown RBP eCLIP12.01□□□□□ -0.49
CNOT3-202ENST00000358389 ZNF862O60290 1169 aa12.01□□□□□ -0.49
CNOT3-202ENST00000358389 PABPC4LP0CB38 370 aaKnown RBP12.01□□□□□ -0.49
CNOT3-202ENST00000358389 RARBP10826 455 aa12.01□□□□□ -0.49
CNOT3-202ENST00000358389 MUTP22033 750 aa12.01□□□□□ -0.49
CNOT3-202ENST00000358389 SFT2D3Q587I9 215 aa12.01□□□□□ -0.49
CNOT3-202ENST00000358389 TBC1D9BQ66K14 1250 aa12.01□□□□□ -0.49
CNOT3-202ENST00000358389 TSHZ1Q6ZSZ6 1077 aa12.01□□□□□ -0.49
CNOT3-202ENST00000358389 HAPLN3Q96S86 360 aa12.01□□□□□ -0.49
CNOT3-202ENST00000358389 PFDN4Q9NQP4 134 aa12.01□□□□□ -0.49
CNOT3-202ENST00000358389 NDUFA13Q9P0J0 144 aa12.01□□□□□ -0.49
CNOT3-202ENST00000358389 SLC7A8Q9UHI5 535 aa12.01□□□□□ -0.49
CNOT3-202ENST00000358389 ZNF180Q9UJW8 692 aa12.01□□□□□ -0.49
CNOT3-202ENST00000358389 GTPBP10A4D1E9 387 aaKnown RBP12.01□□□□□ -0.49
CNOT3-202ENST00000358389 GOLGA8IPA6NC78 632 aa12.01□□□□□ -0.49
CNOT3-202ENST00000358389 GOLGA8JA6NMD2 632 aa12.01□□□□□ -0.49
CNOT3-202ENST00000358389 PDLIM1O00151 329 aa12.01□□□□□ -0.49
CNOT3-202ENST00000358389 KRT10P13645 584 aa12.01□□□□□ -0.49
CNOT3-202ENST00000358389 UQCRBP14927 111 aa12.01□□□□□ -0.49
CNOT3-202ENST00000358389 CCR3P51677 355 aa12.01□□□□□ -0.49
CNOT3-202ENST00000358389 SLC12A3P55017 1021 aa12.01□□□□□ -0.49
CNOT3-202ENST00000358389 DYNLT1P63172 113 aa12.01□□□□□ -0.49
CNOT3-202ENST00000358389 BFSP1Q12934 665 aa12.01□□□□□ -0.49
CNOT3-202ENST00000358389 TFDP1Q14186 410 aa12.01□□□□□ -0.49
CNOT3-202ENST00000358389 CNGA3Q16281 694 aa12.01□□□□□ -0.49
CNOT3-202ENST00000358389 DNAL1Q4LDG9 190 aa12.01□□□□□ -0.49
CNOT3-202ENST00000358389 RHBDF2Q6PJF5 856 aa12.01□□□□□ -0.49
CNOT3-202ENST00000358389 C3orf62Q6ZUJ4 267 aa12.01□□□□□ -0.49
CNOT3-202ENST00000358389 DENND1AQ8TEH3 1009 aa12.01□□□□□ -0.49
CNOT3-202ENST00000358389 PTCD3Q96EY7 689 aaKnown RBP12.01□□□□□ -0.49
CNOT3-202ENST00000358389 PRPF18Q99633 342 aaKnown RBP12.01□□□□□ -0.49
CNOT3-202ENST00000358389 SLC13A1Q9BZW2 595 aa12.01□□□□□ -0.49
CNOT3-202ENST00000358389 C15orf38-AP3S2A0A0A6YYH1 394 aa12.01□□□□□ -0.49
CNOT3-202ENST00000358389 LOC100653049A0A140TA62 436 aa12.01□□□□□ -0.49
CNOT3-202ENST00000358389 FSCN2O14926 492 aa12.01□□□□□ -0.49
CNOT3-202ENST00000358389 KRT34O76011 436 aa12.01□□□□□ -0.49
CNOT3-202ENST00000358389 INHBAP08476 426 aa12.01□□□□□ -0.49
CNOT3-202ENST00000358389 VIL1P09327 827 aaKnown RBP12.01□□□□□ -0.49
CNOT3-202ENST00000358389 HSPA1LP34931 641 aa12.01□□□□□ -0.49
CNOT3-202ENST00000358389 HOXD13P35453 343 aa12.01□□□□□ -0.49
CNOT3-202ENST00000358389 KRT27Q7Z3Y8 459 aa12.01□□□□□ -0.49
CNOT3-202ENST00000358389 ARPINQ7Z6K5 226 aa12.01□□□□□ -0.49
CNOT3-202ENST00000358389 DHDDSQ86SQ9 333 aa12.01□□□□□ -0.49
CNOT3-202ENST00000358389 TRIML2Q8N7C3 387 aa12.01□□□□□ -0.49
CNOT3-202ENST00000358389 Q9H521 79 aa12.01□□□□□ -0.49
CNOT3-202ENST00000358389 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms