RNA–Protein interactions for RNA: ENST00000357085.4

TRIM38-201, Transcript of tripartite motif containing 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM38, Length 9,413 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38-201ENST00000357085 CBX6O95503 412 aa6.88□□□□□ -1.31
TRIM38-201ENST00000357085 SLFN12LQ6IEE8 588 aa6.88□□□□□ -1.31
TRIM38-201ENST00000357085 TTC30BQ8N4P2 665 aa6.88□□□□□ -1.31
TRIM38-201ENST00000357085 ZNF180Q9UJW8 692 aa6.88□□□□□ -1.31
TRIM38-201ENST00000357085 PTBP2Q9UKA9 531 aaKnown RBP6.88□□□□□ -1.31
TRIM38-201ENST00000357085 STXBP5LQ9Y2K9 1186 aa6.88□□□□□ -1.31
TRIM38-201ENST00000357085 PXDNQ92626 1479 aa6.88□□□□□ -1.31
TRIM38-201ENST00000357085 GAS7O60861 476 aa6.88□□□□□ -1.31
TRIM38-201ENST00000357085 KRT1P04264 644 aa6.88□□□□□ -1.31
TRIM38-201ENST00000357085 PABPC4LP0CB38 370 aaKnown RBP6.88□□□□□ -1.31
TRIM38-201ENST00000357085 MYBP10242 640 aa6.88□□□□□ -1.31
TRIM38-201ENST00000357085 JAK1P23458 1154 aa6.88□□□□□ -1.31
TRIM38-201ENST00000357085 JAK3P52333 1124 aa6.88□□□□□ -1.31
TRIM38-201ENST00000357085 ART3Q13508 389 aa6.88□□□□□ -1.31
TRIM38-201ENST00000357085 HAUS6Q7Z4H7 955 aa6.88□□□□□ -1.31
TRIM38-201ENST00000357085 MMTAG2Q9BU76 263 aaKnown RBP6.88□□□□□ -1.31
TRIM38-201ENST00000357085 HMG20AQ9NP66 347 aa6.88□□□□□ -1.31
TRIM38-201ENST00000357085 SIK3Q9Y2K2 1263 aa6.88□□□□□ -1.31
TRIM38-201ENST00000357085 DDX3XO00571 662 aaKnown RBP eCLIP6.88□□□□□ -1.31
TRIM38-201ENST00000357085 KLF11O14901 512 aa6.88□□□□□ -1.31
TRIM38-201ENST00000357085 ITGA2BP08514 1039 aa6.88□□□□□ -1.31
TRIM38-201ENST00000357085 TPBGLP0DKB5 382 aa6.88□□□□□ -1.31
TRIM38-201ENST00000357085 PSMC3P17980 439 aa6.88□□□□□ -1.31
TRIM38-201ENST00000357085 TECP42680 631 aa6.88□□□□□ -1.31
TRIM38-201ENST00000357085 KDSRQ06136 332 aa6.88□□□□□ -1.31
TRIM38-201ENST00000357085 MESDQ14696 234 aa6.88□□□□□ -1.31
TRIM38-201ENST00000357085 UGP2Q16851 508 aa6.88□□□□□ -1.31
TRIM38-201ENST00000357085 PRR16Q569H4 304 aa6.88□□□□□ -1.31
TRIM38-201ENST00000357085 BORAQ6PGQ7 559 aa6.88□□□□□ -1.31
TRIM38-201ENST00000357085 TRIM50Q86XT4 487 aa6.88□□□□□ -1.31
TRIM38-201ENST00000357085 PPWD1Q96BP3 646 aaKnown RBP6.88□□□□□ -1.31
TRIM38-201ENST00000357085 ZNF594Q96JF6 807 aaPredicted RBP6.88□□□□□ -1.31
TRIM38-201ENST00000357085 DCLK3Q9C098 648 aa6.88□□□□□ -1.31
TRIM38-201ENST00000357085 MPP6Q9NZW5 540 aa6.88□□□□□ -1.31
TRIM38-201ENST00000357085 WDR91A4D1P6 747 aa6.88□□□□□ -1.31
TRIM38-201ENST00000357085 B2RBV5 119 aa6.88□□□□□ -1.31
TRIM38-201ENST00000357085 PFDN6O15212 129 aa6.88□□□□□ -1.31
TRIM38-201ENST00000357085 IL6STP40189 918 aaPredicted RBP6.88□□□□□ -1.31
TRIM38-201ENST00000357085 BTKQ06187 659 aa6.88□□□□□ -1.31
TRIM38-201ENST00000357085 WASHC5Q12768 1159 aa6.88□□□□□ -1.31
TRIM38-201ENST00000357085 DNAJC3Q13217 504 aa6.88□□□□□ -1.31
TRIM38-201ENST00000357085 KIF22Q14807 665 aa6.88□□□□□ -1.31
TRIM38-201ENST00000357085 TRIP13Q15645 432 aaPredicted RBP6.88□□□□□ -1.31
TRIM38-201ENST00000357085 NFIL3Q16649 462 aa6.88□□□□□ -1.31
TRIM38-201ENST00000357085 FAM91A1Q658Y4 838 aa6.88□□□□□ -1.31
TRIM38-201ENST00000357085 PPP4R4Q6NUP7 873 aa6.88□□□□□ -1.31
TRIM38-201ENST00000357085 GIPC2Q8TF65 315 aa6.88□□□□□ -1.31
TRIM38-201ENST00000357085 GPKOWQ92917 476 aaPredicted RBP eCLIP6.88□□□□□ -1.311e-11■■■□□ 18.3
TRIM38-201ENST00000357085 LGR6Q9HBX8 967 aa6.88□□□□□ -1.31
TRIM38-201ENST00000357085 SYBUQ9NX95 663 aa6.88□□□□□ -1.31
TRIM38-201ENST00000357085 CNOT8Q9UFF9 292 aaKnown RBP6.88□□□□□ -1.31
TRIM38-201ENST00000357085 GUCY1A2P33402 732 aa6.88□□□□□ -1.31
TRIM38-201ENST00000357085 LRRC36Q1X8D7 754 aa6.88□□□□□ -1.31
TRIM38-201ENST00000357085 C4orf50Q6ZRC1 276 aa6.88□□□□□ -1.31
TRIM38-201ENST00000357085 NLRP10Q86W26 655 aa6.88□□□□□ -1.31
TRIM38-201ENST00000357085 TTC8Q8TAM2 541 aa6.88□□□□□ -1.31
TRIM38-201ENST00000357085 SKA1Q96BD8 255 aa6.88□□□□□ -1.31
TRIM38-201ENST00000357085 AMNQ9BXJ7 453 aa6.88□□□□□ -1.31
TRIM38-201ENST00000357085 EML4Q9HC35 981 aaKnown RBP6.88□□□□□ -1.31
TRIM38-201ENST00000357085 THAP1Q9NVV9 213 aa6.88□□□□□ -1.31
TRIM38-201ENST00000357085 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.88□□□□□ -1.31
TRIM38-201ENST00000357085 AP3M1Q9Y2T2 418 aa6.88□□□□□ -1.31
TRIM38-201ENST00000357085 RBM47A0AV96 593 aaKnown RBP6.87□□□□□ -1.31
TRIM38-201ENST00000357085 SULT2A1Q06520 285 aa6.87□□□□□ -1.31
TRIM38-201ENST00000357085 XXYLT1Q8NBI6 393 aa6.87□□□□□ -1.31
TRIM38-201ENST00000357085 ZNF317Q96PQ6 595 aaPredicted RBP6.87□□□□□ -1.31
TRIM38-201ENST00000357085 DHX36Q9H2U1 1008 aaKnown RBP6.87□□□□□ -1.31
TRIM38-201ENST00000357085 DSEQ9UL01 958 aa6.87□□□□□ -1.31
TRIM38-201ENST00000357085 MYRFQ9Y2G1 1151 aa6.87□□□□□ -1.31
TRIM38-201ENST00000357085 PAX3P23760 479 aa6.87□□□□□ -1.31
TRIM38-201ENST00000357085 PSMA4P25789 261 aaKnown RBP6.87□□□□□ -1.31
TRIM38-201ENST00000357085 HPCAP84074 193 aa6.87□□□□□ -1.31
TRIM38-201ENST00000357085 PTP4A2Q12974 167 aa6.87□□□□□ -1.31
TRIM38-201ENST00000357085 DNAJC24Q6P3W2 148 aa6.87□□□□□ -1.31
TRIM38-201ENST00000357085 HDDC2Q7Z4H3 204 aa6.87□□□□□ -1.31
TRIM38-201ENST00000357085 CDKL3Q8IVW4 592 aaPredicted RBP6.87□□□□□ -1.31
TRIM38-201ENST00000357085 FITM2Q8N6M3 262 aa6.87□□□□□ -1.31
TRIM38-201ENST00000357085 BIRC8Q96P09 236 aa6.87□□□□□ -1.31
TRIM38-201ENST00000357085 METTL5Q9NRN9 209 aaKnown RBP6.87□□□□□ -1.31
TRIM38-201ENST00000357085 ANGPTL3Q9Y5C1 460 aa6.87□□□□□ -1.31
TRIM38-201ENST00000357085 ALS2Q96Q42 1657 aa6.87□□□□□ -1.31
TRIM38-201ENST00000357085 TRIM43BA6NCK2 446 aa6.87□□□□□ -1.31
TRIM38-201ENST00000357085 E9PMD0 336 aa6.87□□□□□ -1.31
TRIM38-201ENST00000357085 KRT36O76013 467 aa6.87□□□□□ -1.31
TRIM38-201ENST00000357085 APOEP02649 317 aa6.87□□□□□ -1.31
TRIM38-201ENST00000357085 TAC1P20366 129 aa6.87□□□□□ -1.31
TRIM38-201ENST00000357085 DUPD1Q68J44 220 aa6.87□□□□□ -1.31
TRIM38-201ENST00000357085 CAPN12Q6ZSI9 719 aa6.87□□□□□ -1.31
TRIM38-201ENST00000357085 TMEM110Q86TL2 294 aa6.87□□□□□ -1.31
TRIM38-201ENST00000357085 NUDCD3Q8IVD9 361 aa6.87□□□□□ -1.31
TRIM38-201ENST00000357085 HACE1Q8IYU2 909 aa6.87□□□□□ -1.31
TRIM38-201ENST00000357085 LRRC57Q8N9N7 239 aa6.87□□□□□ -1.31
TRIM38-201ENST00000357085 DQX1Q8TE96 717 aaKnown RBP6.87□□□□□ -1.31
TRIM38-201ENST00000357085 ARHGEF1Q92888 912 aaKnown RBP6.87□□□□□ -1.31
TRIM38-201ENST00000357085 ZNF518BQ9C0D4 1074 aa6.87□□□□□ -1.31
TRIM38-201ENST00000357085 SYNPO2Q9UMS6 1093 aa6.87□□□□□ -1.31
TRIM38-201ENST00000357085 ATP11BQ9Y2G3 1177 aa6.87□□□□□ -1.31
TRIM38-201ENST00000357085 MTA2O94776 668 aa6.87□□□□□ -1.31
TRIM38-201ENST00000357085 C4BPBP20851 252 aa6.87□□□□□ -1.31
TRIM38-201ENST00000357085 EPHB1P54762 984 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms