RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 NPTX2P47972 431 aa10.69□□□□□ -0.7
PTPRA-203ENST00000356147 NEK3P51956 506 aa10.69□□□□□ -0.7
PTPRA-203ENST00000356147 GDF10P55107 478 aa10.69□□□□□ -0.7
PTPRA-203ENST00000356147 MAMLD1Q13495 774 aa10.69□□□□□ -0.7
PTPRA-203ENST00000356147 THOC5Q13769 683 aaKnown RBP10.69□□□□□ -0.7
PTPRA-203ENST00000356147 CTC1Q2NKJ3 1217 aa10.69□□□□□ -0.7
PTPRA-203ENST00000356147 C11orf91Q3C1V1 193 aa10.69□□□□□ -0.7
PTPRA-203ENST00000356147 KCNT1Q5JUK3 1230 aa10.69□□□□□ -0.7
PTPRA-203ENST00000356147 KBTBD2Q8IY47 623 aa10.69□□□□□ -0.7
PTPRA-203ENST00000356147 SLC25A41Q8N5S1 370 aa10.69□□□□□ -0.7
PTPRA-203ENST00000356147 RBBP8NLQ8NC74 664 aaPredicted RBP10.69□□□□□ -0.7
PTPRA-203ENST00000356147 SHKBP1Q8TBC3 707 aa10.69□□□□□ -0.7
PTPRA-203ENST00000356147 CERKQ8TCT0 537 aa10.69□□□□□ -0.7
PTPRA-203ENST00000356147 ZNF333Q96JL9 665 aa10.69□□□□□ -0.7
PTPRA-203ENST00000356147 MXRA8Q9BRK3 442 aa10.69□□□□□ -0.7
PTPRA-203ENST00000356147 C1orf112Q9NSG2 853 aa10.69□□□□□ -0.7
PTPRA-203ENST00000356147 MARCOQ9UEW3 520 aaPredicted RBP10.69□□□□□ -0.7
PTPRA-203ENST00000356147 CLUHO75153 1309 aa10.69□□□□□ -0.7
PTPRA-203ENST00000356147 ATP5HO75947 161 aa10.69□□□□□ -0.7
PTPRA-203ENST00000356147 HAUS5O94927 633 aa10.69□□□□□ -0.7
PTPRA-203ENST00000356147 KITP10721 976 aa10.69□□□□□ -0.7
PTPRA-203ENST00000356147 MAN1A1P33908 653 aa10.69□□□□□ -0.7
PTPRA-203ENST00000356147 QARSP47897 775 aaKnown RBP10.69□□□□□ -0.7
PTPRA-203ENST00000356147 GPC3P51654 580 aa10.69□□□□□ -0.7
PTPRA-203ENST00000356147 GTF2BQ00403 316 aa10.69□□□□□ -0.7
PTPRA-203ENST00000356147 WDR72Q3MJ13 1102 aa10.69□□□□□ -0.7
PTPRA-203ENST00000356147 BBS9Q3SYG4 887 aa10.69□□□□□ -0.7
PTPRA-203ENST00000356147 FNBP1LQ5T0N5 605 aa10.69□□□□□ -0.7
PTPRA-203ENST00000356147 FYB2Q5VWT5 728 aa10.69□□□□□ -0.7
PTPRA-203ENST00000356147 FOXB2Q5VYV0 432 aa10.69□□□□□ -0.7
PTPRA-203ENST00000356147 ISLR2Q6UXK2 745 aa10.69□□□□□ -0.7
PTPRA-203ENST00000356147 C3orf62Q6ZUJ4 267 aa10.69□□□□□ -0.7
PTPRA-203ENST00000356147 SYDE1Q6ZW31 735 aaPredicted RBP10.69□□□□□ -0.7
PTPRA-203ENST00000356147 ALYREFQ86V81 257 aaKnown RBP10.69□□□□□ -0.7
PTPRA-203ENST00000356147 RHPN2Q8IUC4 686 aa10.69□□□□□ -0.7
PTPRA-203ENST00000356147 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.69□□□□□ -0.7
PTPRA-203ENST00000356147 GINM1Q9NU53 330 aa10.69□□□□□ -0.7
PTPRA-203ENST00000356147 PCDHB4Q9Y5E5 795 aa10.69□□□□□ -0.7
PTPRA-203ENST00000356147 COL24A1Q17RW2 1714 aa10.68□□□□□ -0.7
PTPRA-203ENST00000356147 NRAPQ86VF7 1730 aa10.68□□□□□ -0.7
PTPRA-203ENST00000356147 MAGEB2O15479 319 aa10.68□□□□□ -0.7
PTPRA-203ENST00000356147 GSC2O15499 205 aa10.68□□□□□ -0.7
PTPRA-203ENST00000356147 BGNP21810 368 aa10.68□□□□□ -0.7
PTPRA-203ENST00000356147 GLRA2P23416 452 aa10.68□□□□□ -0.7
PTPRA-203ENST00000356147 CENPCQ03188 943 aa10.68□□□□□ -0.7
PTPRA-203ENST00000356147 LRRC36Q1X8D7 754 aa10.68□□□□□ -0.7
PTPRA-203ENST00000356147 PDCD7Q8N8D1 485 aaKnown RBP10.68□□□□□ -0.7
PTPRA-203ENST00000356147 MAIP1Q8WWC4 291 aa10.68□□□□□ -0.7
PTPRA-203ENST00000356147 PRMT6Q96LA8 375 aaPredicted RBP10.68□□□□□ -0.7
PTPRA-203ENST00000356147 ZDHHC15Q96MV8 337 aa10.68□□□□□ -0.7
PTPRA-203ENST00000356147 FAM111AQ96PZ2 611 aa10.68□□□□□ -0.7
PTPRA-203ENST00000356147 DCLRE1BQ9H816 532 aa10.68□□□□□ -0.7
PTPRA-203ENST00000356147 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.68□□□□□ -0.7
PTPRA-203ENST00000356147 KMT5AQ9NQR1 393 aa10.68□□□□□ -0.7
PTPRA-203ENST00000356147 TCEAL9Q9UHQ7 104 aa10.68□□□□□ -0.7
PTPRA-203ENST00000356147 ACTL7BQ9Y614 415 aa10.68□□□□□ -0.7
PTPRA-203ENST00000356147 PTPRJQ12913 1337 aa10.68□□□□□ -0.7
PTPRA-203ENST00000356147 CCDC195A0A1B0GUA6 201 aa10.68□□□□□ -0.7
PTPRA-203ENST00000356147 FAM237BA0A1B0GVD1 139 aa10.68□□□□□ -0.7
PTPRA-203ENST00000356147 E5RJQ4 531 aa10.68□□□□□ -0.7
PTPRA-203ENST00000356147 DHX15O43143 795 aaKnown RBP10.68□□□□□ -0.7
PTPRA-203ENST00000356147 PRPF4O43172 522 aaKnown RBP eCLIP10.68□□□□□ -0.7
PTPRA-203ENST00000356147 USP1O94782 785 aa10.68□□□□□ -0.7
PTPRA-203ENST00000356147 SNUPNO95149 360 aaKnown RBP10.68□□□□□ -0.7
PTPRA-203ENST00000356147 KCNA3P22001 575 aa10.68□□□□□ -0.7
PTPRA-203ENST00000356147 MUTP22033 750 aa10.68□□□□□ -0.7
PTPRA-203ENST00000356147 MRPS35P82673 323 aaKnown RBP10.68□□□□□ -0.7
PTPRA-203ENST00000356147 B3GNT9Q6UX72 402 aa10.68□□□□□ -0.7
PTPRA-203ENST00000356147 SP8Q8IXZ3 490 aa10.68□□□□□ -0.7
PTPRA-203ENST00000356147 TEX9Q8N6V9 391 aa10.68□□□□□ -0.7
PTPRA-203ENST00000356147 ENDOVQ8N8Q3 282 aaKnown RBP10.68□□□□□ -0.7
PTPRA-203ENST00000356147 TMEM161BQ8NDZ6 487 aa10.68□□□□□ -0.7
PTPRA-203ENST00000356147 LRRN4Q8WUT4 740 aa10.68□□□□□ -0.7
PTPRA-203ENST00000356147 FAM161BQ96MY7 647 aa10.68□□□□□ -0.7
PTPRA-203ENST00000356147 MCEEQ96PE7 176 aa10.68□□□□□ -0.7
PTPRA-203ENST00000356147 PAFAH2Q99487 392 aa10.68□□□□□ -0.7
PTPRA-203ENST00000356147 MECRQ9BV79 373 aa10.68□□□□□ -0.7
PTPRA-203ENST00000356147 TMEM120AQ9BXJ8 343 aa10.68□□□□□ -0.7
PTPRA-203ENST00000356147 TAS2R1Q9NYW7 299 aa10.68□□□□□ -0.7
PTPRA-203ENST00000356147 KCND2Q9NZV8 630 aa10.68□□□□□ -0.7
PTPRA-203ENST00000356147 ASTN2O75129 1339 aaPredicted RBP10.67□□□□□ -0.7
PTPRA-203ENST00000356147 C2CD2LO14523 706 aa10.67□□□□□ -0.7
PTPRA-203ENST00000356147 LIN7AO14910 233 aaPredicted RBP10.67□□□□□ -0.7
PTPRA-203ENST00000356147 FAM155BO75949 473 aa10.67□□□□□ -0.7
PTPRA-203ENST00000356147 TROVE2P10155 538 aaKnown RBP eCLIP10.67□□□□□ -0.7
PTPRA-203ENST00000356147 VHLP40337 213 aa10.67□□□□□ -0.7
PTPRA-203ENST00000356147 ARFIP2P53365 341 aa10.67□□□□□ -0.7
PTPRA-203ENST00000356147 CYP24A1Q07973 514 aa10.67□□□□□ -0.7
PTPRA-203ENST00000356147 BRDTQ58F21 947 aaPredicted RBP10.67□□□□□ -0.7
PTPRA-203ENST00000356147 WASHC2DQ5SRD0 308 aa10.67□□□□□ -0.7
PTPRA-203ENST00000356147 ZBTB41Q5SVQ8 909 aa10.67□□□□□ -0.7
PTPRA-203ENST00000356147 LRRC74BQ6ZQY2 392 aa10.67□□□□□ -0.7
PTPRA-203ENST00000356147 MON1BQ7L1V2 547 aa10.67□□□□□ -0.7
PTPRA-203ENST00000356147 PYROXD1Q8WU10 500 aa10.67□□□□□ -0.7
PTPRA-203ENST00000356147 WDR83Q9BRX9 315 aaKnown RBP10.67□□□□□ -0.7
PTPRA-203ENST00000356147 MANSC1Q9H8J5 431 aa10.67□□□□□ -0.7
PTPRA-203ENST00000356147 ZWILCHQ9H900 591 aa10.67□□□□□ -0.7
PTPRA-203ENST00000356147 ANKFY1Q9P2R3 1169 aa10.67□□□□□ -0.7
PTPRA-203ENST00000356147 PSMC3IPQ9P2W1 217 aaPredicted RBP10.67□□□□□ -0.7
PTPRA-203ENST00000356147 STOML1Q9UBI4 398 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms