RNA–Protein interactions for RNA: ENST00000355530.6

SPNS3-201, Transcript of sphingolipid transporter 3 (putative), humanhuman

APPRIS P1 TSL 2 BASIC

Gene SPNS3, Length 2,133 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS3-201ENST00000355530 MFSD7Q6UXD7 560 aa19.27■□□□□ 0.68
SPNS3-201ENST00000355530 RGS9BPQ6ZS82 235 aa19.27■□□□□ 0.68
SPNS3-201ENST00000355530 ECHDC2Q86YB7 292 aa19.27■□□□□ 0.68
SPNS3-201ENST00000355530 ANKFY1Q9P2R3 1169 aa19.27■□□□□ 0.68
SPNS3-201ENST00000355530 SCAF8Q9UPN6 1271 aaKnown RBP19.27■□□□□ 0.68
SPNS3-201ENST00000355530 SHOC2Q9UQ13 582 aa19.27■□□□□ 0.68
SPNS3-201ENST00000355530 DRG1Q9Y295 367 aaKnown RBP19.27■□□□□ 0.68
SPNS3-201ENST00000355530 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.27■□□□□ 0.68
SPNS3-201ENST00000355530 A0A0B4J269 797 aa19.27■□□□□ 0.67
SPNS3-201ENST00000355530 LRRIQ4A6NIV6 560 aa19.27■□□□□ 0.67
SPNS3-201ENST00000355530 K7ERI5 159 aa19.27■□□□□ 0.67
SPNS3-201ENST00000355530 KRT16P08779 473 aa19.27■□□□□ 0.67
SPNS3-201ENST00000355530 GPS1Q13098 491 aa19.27■□□□□ 0.67
SPNS3-201ENST00000355530 NCOA4Q13772 614 aa19.27■□□□□ 0.67
SPNS3-201ENST00000355530 SPARCL1Q14515 664 aa19.27■□□□□ 0.67
SPNS3-201ENST00000355530 SPOCD1Q6ZMY3 1216 aa19.27■□□□□ 0.67
SPNS3-201ENST00000355530 GLIS1Q8NBF1 620 aa19.27■□□□□ 0.67
SPNS3-201ENST00000355530 REPS2Q8NFH8 660 aa19.27■□□□□ 0.67
SPNS3-201ENST00000355530 ASAP3Q8TDY4 903 aa19.27■□□□□ 0.67
SPNS3-201ENST00000355530 ZNF606Q8WXB4 792 aa19.27■□□□□ 0.67
SPNS3-201ENST00000355530 TMEM143Q96AN5 459 aa19.27■□□□□ 0.67
SPNS3-201ENST00000355530 TRABDQ9H4I3 376 aa19.27■□□□□ 0.67
SPNS3-201ENST00000355530 CNTNAP2Q9UHC6 1331 aa19.26■□□□□ 0.67
SPNS3-201ENST00000355530 SPATA31C2B4DYI2 1134 aa19.26■□□□□ 0.67
SPNS3-201ENST00000355530 IBSPP21815 317 aaPredicted RBP19.26■□□□□ 0.67
SPNS3-201ENST00000355530 GLRA2P23416 452 aa19.26■□□□□ 0.67
SPNS3-201ENST00000355530 VCPP55072 806 aaKnown RBP19.26■□□□□ 0.67
SPNS3-201ENST00000355530 TAP1Q03518 808 aa19.26■□□□□ 0.67
SPNS3-201ENST00000355530 CXCL9Q07325 125 aa19.26■□□□□ 0.67
SPNS3-201ENST00000355530 ZNF252P-AS1Q0IIN9 211 aa19.26■□□□□ 0.67
SPNS3-201ENST00000355530 RASA2Q15283 850 aa19.26■□□□□ 0.67
SPNS3-201ENST00000355530 CCDC142Q17RM4 750 aa19.26■□□□□ 0.67
SPNS3-201ENST00000355530 ATP13A4Q4VNC1 1196 aa19.26■□□□□ 0.67
SPNS3-201ENST00000355530 ZBTB41Q5SVQ8 909 aa19.26■□□□□ 0.67
SPNS3-201ENST00000355530 DNAJC24Q6P3W2 148 aa19.26■□□□□ 0.67
SPNS3-201ENST00000355530 TLDC1Q6P9B6 456 aa19.26■□□□□ 0.67
SPNS3-201ENST00000355530 UBR7Q8N806 425 aa19.26■□□□□ 0.67
SPNS3-201ENST00000355530 ZBTB45Q96K62 511 aaPredicted RBP19.26■□□□□ 0.67
SPNS3-201ENST00000355530 DHX33Q9H6R0 707 aaKnown RBP19.26■□□□□ 0.67
SPNS3-201ENST00000355530 TXLNGQ9NUQ3 528 aa19.26■□□□□ 0.67
SPNS3-201ENST00000355530 ADGRA2Q96PE1 1338 aa19.25■□□□□ 0.67
SPNS3-201ENST00000355530 ATP2A1O14983 1001 aa19.25■□□□□ 0.67
SPNS3-201ENST00000355530 UNC5CO95185 931 aa19.25■□□□□ 0.67
SPNS3-201ENST00000355530 OATP04181 439 aa19.25■□□□□ 0.67
SPNS3-201ENST00000355530 ITGAVP06756 1048 aa19.25■□□□□ 0.67
SPNS3-201ENST00000355530 TCF4P15884 667 aa19.25■□□□□ 0.67
SPNS3-201ENST00000355530 OASLQ15646 514 aaKnown RBP19.25■□□□□ 0.67
SPNS3-201ENST00000355530 TFDP3Q5H9I0 405 aa19.25■□□□□ 0.67
SPNS3-201ENST00000355530 FAM47EQ6ZV65 393 aa19.25■□□□□ 0.67
SPNS3-201ENST00000355530 CENPUQ71F23 418 aa19.25■□□□□ 0.67
SPNS3-201ENST00000355530 KIF2BQ8N4N8 673 aa19.25■□□□□ 0.67
SPNS3-201ENST00000355530 OR5B17Q8NGF7 314 aa19.25■□□□□ 0.67
SPNS3-201ENST00000355530 DENND1AQ8TEH3 1009 aa19.25■□□□□ 0.67
SPNS3-201ENST00000355530 AGAP11Q8TF27 550 aa19.25■□□□□ 0.67
SPNS3-201ENST00000355530 NKD2Q969F2 451 aaPredicted RBP19.25■□□□□ 0.67
SPNS3-201ENST00000355530 STAMBPL1Q96FJ0 436 aa19.25■□□□□ 0.67
SPNS3-201ENST00000355530 L3MBTL3Q96JM7 780 aaPredicted RBP19.25■□□□□ 0.67
SPNS3-201ENST00000355530 MCEEQ96PE7 176 aa19.25■□□□□ 0.67
SPNS3-201ENST00000355530 SMC6Q96SB8 1091 aa19.25■□□□□ 0.67
SPNS3-201ENST00000355530 PAIP2Q9BPZ3 127 aaKnown RBP19.25■□□□□ 0.67
SPNS3-201ENST00000355530 TARS2Q9BW92 718 aaKnown RBP19.25■□□□□ 0.67
SPNS3-201ENST00000355530 PCDH9Q9HC56 1237 aa19.25■□□□□ 0.67
SPNS3-201ENST00000355530 DDX56Q9NY93 547 aaKnown RBP19.25■□□□□ 0.67
SPNS3-201ENST00000355530 IVNS1ABPQ9Y6Y0 642 aa19.25■□□□□ 0.67
SPNS3-201ENST00000355530 hCG_1818297A0A087WSY0 165 aa19.25■□□□□ 0.67
SPNS3-201ENST00000355530 TCRBV5S1A1TA0A578 114 aa19.25■□□□□ 0.67
SPNS3-201ENST00000355530 ZSCAN5DPP0CG00 497 aa19.25■□□□□ 0.67
SPNS3-201ENST00000355530 CCND1P24385 295 aa19.25■□□□□ 0.67
SPNS3-201ENST00000355530 MSH2P43246 934 aa19.25■□□□□ 0.67
SPNS3-201ENST00000355530 AP3M2P53677 418 aa19.25■□□□□ 0.67
SPNS3-201ENST00000355530 LACTBP83111 547 aaPredicted RBP19.25■□□□□ 0.67
SPNS3-201ENST00000355530 PIGHQ14442 188 aaPredicted RBP19.25■□□□□ 0.67
SPNS3-201ENST00000355530 RNASEH2BQ5TBB1 312 aaKnown RBP19.25■□□□□ 0.67
SPNS3-201ENST00000355530 SLC7A3Q8WY07 619 aa19.25■□□□□ 0.67
SPNS3-201ENST00000355530 FBXO40Q9UH90 709 aa19.25■□□□□ 0.67
SPNS3-201ENST00000355530 SLC24A2Q9UI40 661 aa19.25■□□□□ 0.67
SPNS3-201ENST00000355530 LOC285556D6RIA3 1793 aa19.25■□□□□ 0.67
SPNS3-201ENST00000355530 POC1B-GALNT4F8VUJ3 575 aa19.24■□□□□ 0.67
SPNS3-201ENST00000355530 SPAG7O75391 227 aa19.24■□□□□ 0.67
SPNS3-201ENST00000355530 KRT15P19012 456 aa19.24■□□□□ 0.67
SPNS3-201ENST00000355530 ARL2P36404 184 aa19.24■□□□□ 0.67
SPNS3-201ENST00000355530 BACE1P56817 501 aa19.24■□□□□ 0.67
SPNS3-201ENST00000355530 FASTKD3Q14CZ7 662 aaKnown RBP19.24■□□□□ 0.67
SPNS3-201ENST00000355530 SETDB1Q15047 1291 aa19.24■□□□□ 0.67
SPNS3-201ENST00000355530 PDK4Q16654 411 aa19.24■□□□□ 0.67
SPNS3-201ENST00000355530 DCUN1D2Q6PH85 259 aa19.24■□□□□ 0.67
SPNS3-201ENST00000355530 NIPA2Q8N8Q9 360 aa19.24■□□□□ 0.67
SPNS3-201ENST00000355530 ANKLE1Q8NAG6 615 aa19.24■□□□□ 0.67
SPNS3-201ENST00000355530 VPS37BQ9H9H4 285 aa19.24■□□□□ 0.67
SPNS3-201ENST00000355530 NOP53Q9NZM5 478 aaKnown RBP19.24■□□□□ 0.67
SPNS3-201ENST00000355530 ZNF214Q9UL59 606 aaPredicted RBP19.24■□□□□ 0.67
SPNS3-201ENST00000355530 MAFBQ9Y5Q3 323 aaPredicted RBP19.24■□□□□ 0.67
SPNS3-201ENST00000355530 LOC102724159A0A0B4J2E5 919 aa19.24■□□□□ 0.67
SPNS3-201ENST00000355530 ALOX15BO15296 676 aa19.24■□□□□ 0.67
SPNS3-201ENST00000355530 ASS1P00966 412 aaKnown RBP19.24■□□□□ 0.67
SPNS3-201ENST00000355530 YARSP54577 528 aaKnown RBP19.24■□□□□ 0.67
SPNS3-201ENST00000355530 PWP2Q15269 919 aaKnown RBP19.24■□□□□ 0.67
SPNS3-201ENST00000355530 ZBED8Q8IZ13 594 aa19.24■□□□□ 0.67
SPNS3-201ENST00000355530 TMEM35BQ8NCS4 154 aa19.24■□□□□ 0.67
SPNS3-201ENST00000355530 RAB3IPQ96QF0 476 aaPredicted RBP19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms