RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 CACNA2D3Q8IZS8 1091 aa23.57■■□□□ 1.36
NKX2-1-201ENST00000354822 LRRC71Q8N4P6 559 aa23.57■■□□□ 1.36
NKX2-1-201ENST00000354822 CABS1Q96KC9 395 aa23.57■■□□□ 1.36
NKX2-1-201ENST00000354822 SPATA33Q96N06 139 aa23.57■■□□□ 1.36
NKX2-1-201ENST00000354822 CCDC134Q9H6E4 229 aa23.57■■□□□ 1.36
NKX2-1-201ENST00000354822 STRIP2Q9ULQ0 834 aa23.57■■□□□ 1.36
NKX2-1-201ENST00000354822 KCNH4Q9UQ05 1017 aa23.57■■□□□ 1.36
NKX2-1-201ENST00000354822 LOC102724159A0A0B4J2E5 919 aa23.56■■□□□ 1.36
NKX2-1-201ENST00000354822 HOXC6P09630 235 aa23.56■■□□□ 1.36
NKX2-1-201ENST00000354822 CHKAP35790 457 aa23.56■■□□□ 1.36
NKX2-1-201ENST00000354822 SLCO1A2P46721 670 aa23.56■■□□□ 1.36
NKX2-1-201ENST00000354822 KCTD2Q14681 263 aa23.56■■□□□ 1.36
NKX2-1-201ENST00000354822 PWP2Q15269 919 aaKnown RBP23.56■■□□□ 1.36
NKX2-1-201ENST00000354822 TRIP13Q15645 432 aaPredicted RBP23.56■■□□□ 1.36
NKX2-1-201ENST00000354822 UBAP2Q5T6F2 1119 aaKnown RBP23.56■■□□□ 1.36
NKX2-1-201ENST00000354822 ATF7IP2Q5U623 682 aa23.56■■□□□ 1.36
NKX2-1-201ENST00000354822 ERICH1Q86X53 443 aa23.56■■□□□ 1.36
NKX2-1-201ENST00000354822 DDX56Q9NY93 547 aaKnown RBP23.56■■□□□ 1.36
NKX2-1-201ENST00000354822 AGTPBP1Q9UPW5 1226 aa23.56■■□□□ 1.36
NKX2-1-201ENST00000354822 HBP1O60381 514 aa23.55■■□□□ 1.36
NKX2-1-201ENST00000354822 ACSL3O95573 720 aa23.55■■□□□ 1.36
NKX2-1-201ENST00000354822 YBX3P16989 372 aaKnown RBP eCLIP23.55■■□□□ 1.36
NKX2-1-201ENST00000354822 DRD4P21917 467 aa23.55■■□□□ 1.36
NKX2-1-201ENST00000354822 BRD2P25440 801 aaKnown RBP23.55■■□□□ 1.36
NKX2-1-201ENST00000354822 PTPN7P35236 360 aa23.55■■□□□ 1.36
NKX2-1-201ENST00000354822 PPIL2Q13356 520 aa23.55■■□□□ 1.36
NKX2-1-201ENST00000354822 TTLL12Q14166 644 aaPredicted RBP23.55■■□□□ 1.36
NKX2-1-201ENST00000354822 GPAT2Q6NUI2 795 aa23.55■■□□□ 1.36
NKX2-1-201ENST00000354822 GSTA5Q7RTV2 222 aa23.55■■□□□ 1.36
NKX2-1-201ENST00000354822 NIPA2Q8N8Q9 360 aa23.55■■□□□ 1.36
NKX2-1-201ENST00000354822 ZC3H15Q8WU90 426 aaKnown RBP23.55■■□□□ 1.36
NKX2-1-201ENST00000354822 ATXN2LQ8WWM7 1075 aaKnown RBP23.55■■□□□ 1.36
NKX2-1-201ENST00000354822 SLITRK1Q96PX8 696 aa23.55■■□□□ 1.36
NKX2-1-201ENST00000354822 SYT17Q9BSW7 474 aa23.55■■□□□ 1.36
NKX2-1-201ENST00000354822 DDX23Q9BUQ8 820 aaKnown RBP23.55■■□□□ 1.36
NKX2-1-201ENST00000354822 DNAJC25-GNG10A0A024R161 153 aa23.55■■□□□ 1.36
NKX2-1-201ENST00000354822 FSBPO95073 299 aa23.55■■□□□ 1.36
NKX2-1-201ENST00000354822 IL18RAPO95256 599 aa23.55■■□□□ 1.36
NKX2-1-201ENST00000354822 POLR2BP30876 1174 aaKnown RBP23.55■■□□□ 1.36
NKX2-1-201ENST00000354822 GJC1P36383 396 aa23.55■■□□□ 1.36
NKX2-1-201ENST00000354822 ZFYVE27Q5T4F4 411 aa23.55■■□□□ 1.36
NKX2-1-201ENST00000354822 MOB2Q70IA6 237 aa23.55■■□□□ 1.36
NKX2-1-201ENST00000354822 DRG1Q9Y295 367 aaKnown RBP23.55■■□□□ 1.36
NKX2-1-201ENST00000354822 NDC80O14777 642 aa23.54■■□□□ 1.36
NKX2-1-201ENST00000354822 MED7O43513 233 aa23.54■■□□□ 1.36
NKX2-1-201ENST00000354822 KLRC2P26717 231 aa23.54■■□□□ 1.36
NKX2-1-201ENST00000354822 PPARDQ03181 441 aa23.54■■□□□ 1.36
NKX2-1-201ENST00000354822 QPCTQ16769 361 aa23.54■■□□□ 1.36
NKX2-1-201ENST00000354822 PPP1R15BQ5SWA1 713 aa23.54■■□□□ 1.36
NKX2-1-201ENST00000354822 RNF187Q5TA31 235 aaPredicted RBP23.54■■□□□ 1.36
NKX2-1-201ENST00000354822 SCARA3Q6AZY7 606 aa23.54■■□□□ 1.36
NKX2-1-201ENST00000354822 DPY19L2Q6NUT2 758 aa23.54■■□□□ 1.36
NKX2-1-201ENST00000354822 CCDC62Q6P9F0 684 aa23.54■■□□□ 1.36
NKX2-1-201ENST00000354822 CCDC121Q6ZUS5 278 aa23.54■■□□□ 1.36
NKX2-1-201ENST00000354822 IPO4Q8TEX9 1081 aaKnown RBP23.54■■□□□ 1.36
NKX2-1-201ENST00000354822 P3H4Q92791 437 aa23.54■■□□□ 1.36
NKX2-1-201ENST00000354822 L3MBTL3Q96JM7 780 aaPredicted RBP23.54■■□□□ 1.36
NKX2-1-201ENST00000354822 FGD4Q96M96 766 aa23.54■■□□□ 1.36
NKX2-1-201ENST00000354822 MCEEQ96PE7 176 aa23.54■■□□□ 1.36
NKX2-1-201ENST00000354822 ZNF317Q96PQ6 595 aaPredicted RBP23.54■■□□□ 1.36
NKX2-1-201ENST00000354822 MMP19Q99542 508 aa23.54■■□□□ 1.36
NKX2-1-201ENST00000354822 XYLT2Q9H1B5 865 aa23.54■■□□□ 1.36
NKX2-1-201ENST00000354822 LHX5Q9H2C1 402 aa23.54■■□□□ 1.36
NKX2-1-201ENST00000354822 GJB6O95452 261 aa23.54■■□□□ 1.36
NKX2-1-201ENST00000354822 PGK2P07205 417 aa23.54■■□□□ 1.36
NKX2-1-201ENST00000354822 IZUMO3Q5VZ72 239 aa23.54■■□□□ 1.36
NKX2-1-201ENST00000354822 EXOC3L1Q86VI1 746 aa23.54■■□□□ 1.36
NKX2-1-201ENST00000354822 TRIM50Q86XT4 487 aa23.54■■□□□ 1.36
NKX2-1-201ENST00000354822 CCDC77Q9BR77 488 aa23.54■■□□□ 1.36
NKX2-1-201ENST00000354822 TNFSF13BQ9Y275 285 aa23.54■■□□□ 1.36
NKX2-1-201ENST00000354822 LRRC37A2A6NM11 1700 aa23.54■■□□□ 1.36
NKX2-1-201ENST00000354822 INO80B-WBP1J3KQ70 363 aa23.53■■□□□ 1.36
NKX2-1-201ENST00000354822 LIASO43766 372 aa23.53■■□□□ 1.36
NKX2-1-201ENST00000354822 KRT1P04264 644 aa23.53■■□□□ 1.36
NKX2-1-201ENST00000354822 WEE2P0C1S8 567 aa23.53■■□□□ 1.36
NKX2-1-201ENST00000354822 ASPAP45381 313 aa23.53■■□□□ 1.36
NKX2-1-201ENST00000354822 KYNUQ16719 465 aa23.53■■□□□ 1.36
NKX2-1-201ENST00000354822 LONRF1Q17RB8 773 aa23.53■■□□□ 1.36
NKX2-1-201ENST00000354822 TMEM132AQ24JP5 1023 aa23.53■■□□□ 1.36
NKX2-1-201ENST00000354822 ZNF394Q53GI3 561 aa23.53■■□□□ 1.36
NKX2-1-201ENST00000354822 THNSL1Q8IYQ7 743 aa23.53■■□□□ 1.36
NKX2-1-201ENST00000354822 WDTC1Q8N5D0 677 aa23.53■■□□□ 1.36
NKX2-1-201ENST00000354822 NFKBIZQ9BYH8 718 aa23.53■■□□□ 1.36
NKX2-1-201ENST00000354822 INO80BQ9C086 356 aaPredicted RBP23.53■■□□□ 1.36
NKX2-1-201ENST00000354822 MROH8Q9H579 483 aa23.53■■□□□ 1.36
NKX2-1-201ENST00000354822 RPF1Q9H9Y2 349 aaKnown RBP23.53■■□□□ 1.36
NKX2-1-201ENST00000354822 RBPJLQ9UBG7 517 aa23.53■■□□□ 1.36
NKX2-1-201ENST00000354822 OSBPP22059 807 aa23.52■■□□□ 1.36
NKX2-1-201ENST00000354822 EPHX2P34913 555 aa23.52■■□□□ 1.36
NKX2-1-201ENST00000354822 LACTBP83111 547 aaPredicted RBP23.52■■□□□ 1.36
NKX2-1-201ENST00000354822 HIBCHQ6NVY1 386 aaPredicted RBP23.52■■□□□ 1.36
NKX2-1-201ENST00000354822 IVNS1ABPQ9Y6Y0 642 aa23.52■■□□□ 1.36
NKX2-1-201ENST00000354822 VPS41P49754 854 aa23.52■■□□□ 1.36
NKX2-1-201ENST00000354822 POU5F1BQ06416 359 aa23.52■■□□□ 1.36
NKX2-1-201ENST00000354822 ZNF252P-AS1Q0IIN9 211 aa23.52■■□□□ 1.36
NKX2-1-201ENST00000354822 EAPPQ56P03 285 aaPredicted RBP23.52■■□□□ 1.36
NKX2-1-201ENST00000354822 TFDP3Q5H9I0 405 aa23.52■■□□□ 1.36
NKX2-1-201ENST00000354822 EFCAB12Q6NXP0 572 aa23.52■■□□□ 1.36
NKX2-1-201ENST00000354822 SPOCD1Q6ZMY3 1216 aa23.52■■□□□ 1.36
NKX2-1-201ENST00000354822 POLNQ7Z5Q5 900 aa23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms