RNA–Protein interactions for RNA: ENST00000354268.8

SMARCAD1-201, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCAD1, Length 4,912 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-201ENST00000354268 JUPP14923 745 aa2.39□□□□□ -2.03
SMARCAD1-201ENST00000354268 HTR7P34969 479 aa2.39□□□□□ -2.03
SMARCAD1-201ENST00000354268 NOVA1P51513 510 aaKnown RBP2.39□□□□□ -2.03
SMARCAD1-201ENST00000354268 PSMC6P62333 389 aa2.39□□□□□ -2.03
SMARCAD1-201ENST00000354268 SIGLEC14Q08ET2 396 aa2.39□□□□□ -2.03
SMARCAD1-201ENST00000354268 SLBPQ14493 270 aaKnown RBP eCLIP2.39□□□□□ -2.03
SMARCAD1-201ENST00000354268 SMC1AQ14683 1233 aaKnown RBP2.39□□□□□ -2.03
SMARCAD1-201ENST00000354268 TOMM20Q15388 145 aa2.39□□□□□ -2.03
SMARCAD1-201ENST00000354268 DLGAP5Q15398 846 aa2.39□□□□□ -2.03
SMARCAD1-201ENST00000354268 SHHQ15465 462 aa2.39□□□□□ -2.03
SMARCAD1-201ENST00000354268 TTC39AQ5SRH9 613 aa2.39□□□□□ -2.03
SMARCAD1-201ENST00000354268 LIN9Q5TKA1 542 aa2.39□□□□□ -2.03
SMARCAD1-201ENST00000354268 GAREM2Q75VX8 874 aa2.39□□□□□ -2.03
SMARCAD1-201ENST00000354268 DHX32Q7L7V1 743 aaKnown RBP2.39□□□□□ -2.03
SMARCAD1-201ENST00000354268 NBPF5PQ86XG9 351 aaPredicted RBP2.39□□□□□ -2.03
SMARCAD1-201ENST00000354268 VGLL2Q8N8G2 317 aa2.39□□□□□ -2.03
SMARCAD1-201ENST00000354268 DNERQ8NFT8 737 aa2.39□□□□□ -2.03
SMARCAD1-201ENST00000354268 OTUD7AQ8TE49 926 aaPredicted RBP2.39□□□□□ -2.03
SMARCAD1-201ENST00000354268 MARVELD3Q96A59 401 aa2.39□□□□□ -2.03
SMARCAD1-201ENST00000354268 ALG14Q96F25 216 aa2.39□□□□□ -2.03
SMARCAD1-201ENST00000354268 NAF1Q96HR8 494 aaKnown RBP2.39□□□□□ -2.03
SMARCAD1-201ENST00000354268 ANKRD2Q9GZV1 360 aa2.39□□□□□ -2.03
SMARCAD1-201ENST00000354268 FZD8Q9H461 694 aa2.39□□□□□ -2.03
SMARCAD1-201ENST00000354268 FAM124BQ9H5Z6 455 aaPredicted RBP2.39□□□□□ -2.03
SMARCAD1-201ENST00000354268 SPG21Q9NZD8 308 aa2.39□□□□□ -2.03
SMARCAD1-201ENST00000354268 COL20A1Q9P218 1284 aa2.39□□□□□ -2.03
SMARCAD1-201ENST00000354268 NFKBIL1Q9UBC1 381 aaPredicted RBP2.39□□□□□ -2.03
SMARCAD1-201ENST00000354268 ADD3Q9UEY8 706 aaKnown RBP2.39□□□□□ -2.03
SMARCAD1-201ENST00000354268 ANAPC2Q9UJX6 822 aa2.39□□□□□ -2.03
SMARCAD1-201ENST00000354268 ITGB1BP2Q9UKP3 347 aa2.39□□□□□ -2.03
SMARCAD1-201ENST00000354268 CORINQ9Y5Q5 1042 aa2.39□□□□□ -2.03
SMARCAD1-201ENST00000354268 NOS1P29475 1434 aa2.39□□□□□ -2.03
SMARCAD1-201ENST00000354268 MYOM2P54296 1465 aa2.39□□□□□ -2.03
SMARCAD1-201ENST00000354268 SPRY2O43597 315 aa2.39□□□□□ -2.03
SMARCAD1-201ENST00000354268 LRIG2O94898 1065 aa2.39□□□□□ -2.03
SMARCAD1-201ENST00000354268 GOSR1O95249 250 aa2.39□□□□□ -2.03
SMARCAD1-201ENST00000354268 RETP07949 1114 aa2.39□□□□□ -2.03
SMARCAD1-201ENST00000354268 IL2RBP14784 551 aa2.39□□□□□ -2.03
SMARCAD1-201ENST00000354268 AGAP20933 346 aa2.39□□□□□ -2.03
SMARCAD1-201ENST00000354268 FUT4P22083 530 aa2.39□□□□□ -2.03
SMARCAD1-201ENST00000354268 SLC5A2P31639 672 aa2.39□□□□□ -2.03
SMARCAD1-201ENST00000354268 FOXN2P32314 431 aa2.39□□□□□ -2.03
SMARCAD1-201ENST00000354268 GPC1P35052 558 aa2.39□□□□□ -2.03
SMARCAD1-201ENST00000354268 RECQLP46063 649 aaPredicted RBP2.39□□□□□ -2.03
SMARCAD1-201ENST00000354268 ARL4DP49703 201 aa2.39□□□□□ -2.03
SMARCAD1-201ENST00000354268 CABP4P57796 275 aa2.39□□□□□ -2.03
SMARCAD1-201ENST00000354268 TCF15Q12870 199 aa2.39□□□□□ -2.03
SMARCAD1-201ENST00000354268 ARHGEF7Q14155 803 aa2.39□□□□□ -2.03
SMARCAD1-201ENST00000354268 ANKRD20A8PQ5CZ79 823 aa2.39□□□□□ -2.03
SMARCAD1-201ENST00000354268 VARS2Q5ST30 1063 aaKnown RBP2.39□□□□□ -2.03
SMARCAD1-201ENST00000354268 KIAA1841Q6NSI8 718 aa2.39□□□□□ -2.03
SMARCAD1-201ENST00000354268 LCTLQ6UWM7 567 aa2.39□□□□□ -2.03
SMARCAD1-201ENST00000354268 CD300LGQ6UXG3 332 aa2.39□□□□□ -2.03
SMARCAD1-201ENST00000354268 C20orf204Q6ZNR8 217 aa2.39□□□□□ -2.03
SMARCAD1-201ENST00000354268 CACNA2D4Q7Z3S7 1137 aa2.39□□□□□ -2.03
SMARCAD1-201ENST00000354268 BCL6BQ8N143 479 aaPredicted RBP2.39□□□□□ -2.03
SMARCAD1-201ENST00000354268 ZNF619Q8N2I2 560 aa2.39□□□□□ -2.03
SMARCAD1-201ENST00000354268 TSPYL6Q8N831 410 aa2.39□□□□□ -2.03
SMARCAD1-201ENST00000354268 M1APQ8TC57 530 aa2.39□□□□□ -2.03
SMARCAD1-201ENST00000354268 TGFBRAP1Q8WUH2 860 aa2.39□□□□□ -2.03
SMARCAD1-201ENST00000354268 NDRG1Q92597 394 aaKnown RBP2.39□□□□□ -2.03
SMARCAD1-201ENST00000354268 GSDMAQ96QA5 445 aa2.39□□□□□ -2.03
SMARCAD1-201ENST00000354268 OPA3Q9H6K4 179 aa2.39□□□□□ -2.03
SMARCAD1-201ENST00000354268 POLMQ9NP87 494 aaPredicted RBP2.39□□□□□ -2.03
SMARCAD1-201ENST00000354268 PNPLA3Q9NST1 481 aa2.39□□□□□ -2.03
SMARCAD1-201ENST00000354268 VSX1Q9NZR4 365 aaPredicted RBP2.39□□□□□ -2.03
SMARCAD1-201ENST00000354268 ADAM22Q9P0K1 906 aa2.39□□□□□ -2.03
SMARCAD1-201ENST00000354268 IPO11Q9UI26 975 aaKnown RBP2.39□□□□□ -2.03
SMARCAD1-201ENST00000354268 ABCB11O95342 1321 aa2.39□□□□□ -2.03
SMARCAD1-201ENST00000354268 DAPK1P53355 1430 aa2.39□□□□□ -2.03
SMARCAD1-201ENST00000354268 SNAPC4Q5SXM2 1469 aa2.39□□□□□ -2.03
SMARCAD1-201ENST00000354268 PABPN1LA6NDY0 278 aaKnown RBP2.38□□□□□ -2.03
SMARCAD1-201ENST00000354268 LARGE1O95461 756 aa2.38□□□□□ -2.03
SMARCAD1-201ENST00000354268 CELA3BP08861 270 aa2.38□□□□□ -2.03
SMARCAD1-201ENST00000354268 SRFP11831 508 aa2.38□□□□□ -2.03
SMARCAD1-201ENST00000354268 IFNAR1P17181 557 aa2.38□□□□□ -2.03
SMARCAD1-201ENST00000354268 SRP14P37108 136 aaKnown RBP2.38□□□□□ -2.03
SMARCAD1-201ENST00000354268 STARP49675 285 aa2.38□□□□□ -2.03
SMARCAD1-201ENST00000354268 FZD5Q13467 585 aa2.38□□□□□ -2.03
SMARCAD1-201ENST00000354268 SMAD4Q13485 552 aaKnown RBP2.38□□□□□ -2.03
SMARCAD1-201ENST00000354268 C6orf183Q5T699 404 aa2.38□□□□□ -2.03
SMARCAD1-201ENST00000354268 CCDC70Q6NSX1 233 aa2.38□□□□□ -2.03
SMARCAD1-201ENST00000354268 IPMKQ8NFU5 416 aa2.38□□□□□ -2.03
SMARCAD1-201ENST00000354268 IGFBPL1Q8WX77 278 aa2.38□□□□□ -2.03
SMARCAD1-201ENST00000354268 RNF166Q96A37 237 aaPredicted RBP2.38□□□□□ -2.03
SMARCAD1-201ENST00000354268 RMDN3Q96TC7 470 aa2.38□□□□□ -2.03
SMARCAD1-201ENST00000354268 DESI2Q9BSY9 194 aa2.38□□□□□ -2.03
SMARCAD1-201ENST00000354268 PRR14Q9BWN1 585 aa2.38□□□□□ -2.03
SMARCAD1-201ENST00000354268 SEMA4CQ9C0C4 833 aa2.38□□□□□ -2.03
SMARCAD1-201ENST00000354268 SLKQ9H2G2 1235 aaPredicted RBP2.38□□□□□ -2.03
SMARCAD1-201ENST00000354268 NSUN3Q9H649 340 aaKnown RBP2.38□□□□□ -2.03
SMARCAD1-201ENST00000354268 ZFP14Q9HCL3 533 aa2.38□□□□□ -2.03
SMARCAD1-201ENST00000354268 THSD1Q9NS62 852 aa2.38□□□□□ -2.03
SMARCAD1-201ENST00000354268 C1orf112Q9NSG2 853 aa2.38□□□□□ -2.03
SMARCAD1-201ENST00000354268 COQ3Q9NZJ6 369 aa2.38□□□□□ -2.03
SMARCAD1-201ENST00000354268 REV1Q9UBZ9 1251 aa2.38□□□□□ -2.03
SMARCAD1-201ENST00000354268 MYO6Q9UM54 1294 aa2.38□□□□□ -2.03
SMARCAD1-201ENST00000354268 NEXMIFQ5QGS0 1516 aa2.38□□□□□ -2.03
SMARCAD1-201ENST00000354268 NHSL1Q5SYE7 1610 aa2.38□□□□□ -2.03
SMARCAD1-201ENST00000354268 SLC12A8A0AV02 714 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms