RNA–Protein interactions for RNA: ENST00000353319.8

PTPN2-203, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 1,542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-203ENST00000353319 TMEM176AQ96HP8 235 aa11.19□□□□□ -0.62
PTPN2-203ENST00000353319 BTBD6Q96KE9 485 aa11.19□□□□□ -0.62
PTPN2-203ENST00000353319 CFHR5Q9BXR6 569 aa11.19□□□□□ -0.62
PTPN2-203ENST00000353319 AP1M1Q9BXS5 423 aa11.19□□□□□ -0.62
PTPN2-203ENST00000353319 EIF2AQ9BY44 585 aaKnown RBP11.19□□□□□ -0.62
PTPN2-203ENST00000353319 CELF4Q9BZC1 486 aaKnown RBP11.19□□□□□ -0.62
PTPN2-203ENST00000353319 EPB41L5Q9HCM4 733 aa11.19□□□□□ -0.62
PTPN2-203ENST00000353319 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.19□□□□□ -0.62
PTPN2-203ENST00000353319 SNTG2Q9NY99 539 aa11.19□□□□□ -0.62
PTPN2-203ENST00000353319 GTF2IRD1Q9UHL9 959 aa11.19□□□□□ -0.62
PTPN2-203ENST00000353319 BARX2Q9UMQ3 279 aaPredicted RBP11.19□□□□□ -0.62
PTPN2-203ENST00000353319 GINS2Q9Y248 185 aa11.19□□□□□ -0.62
PTPN2-203ENST00000353319 GOLGA6L10A0A0M3HER8 536 aa11.18□□□□□ -0.62
PTPN2-203ENST00000353319 FAM170AA1A519 330 aa11.18□□□□□ -0.62
PTPN2-203ENST00000353319 MYADML2A6NDP7 307 aa11.18□□□□□ -0.62
PTPN2-203ENST00000353319 FSCN2O14926 492 aa11.18□□□□□ -0.62
PTPN2-203ENST00000353319 HMGCRP04035 888 aa11.18□□□□□ -0.62
PTPN2-203ENST00000353319 PYGMP11217 842 aa11.18□□□□□ -0.62
PTPN2-203ENST00000353319 ITGA4P13612 1032 aa11.18□□□□□ -0.62
PTPN2-203ENST00000353319 KCNE1P15382 129 aa11.18□□□□□ -0.62
PTPN2-203ENST00000353319 CDH8P55286 799 aa11.18□□□□□ -0.62
PTPN2-203ENST00000353319 PTPN11Q06124 597 aaPredicted RBP11.18□□□□□ -0.62
PTPN2-203ENST00000353319 MYO1EQ12965 1108 aa11.18□□□□□ -0.62
PTPN2-203ENST00000353319 CYP1B1Q16678 543 aa11.18□□□□□ -0.62
PTPN2-203ENST00000353319 ZNF394Q53GI3 561 aa11.18□□□□□ -0.62
PTPN2-203ENST00000353319 PPP1R15BQ5SWA1 713 aa11.18□□□□□ -0.62
PTPN2-203ENST00000353319 SEL1L2Q5TEA6 688 aa11.18□□□□□ -0.62
PTPN2-203ENST00000353319 CYP4F22Q6NT55 531 aa11.18□□□□□ -0.62
PTPN2-203ENST00000353319 SCARA5Q6ZMJ2 495 aa11.18□□□□□ -0.62
PTPN2-203ENST00000353319 ERICH1Q86X53 443 aa11.18□□□□□ -0.62
PTPN2-203ENST00000353319 KLHL7Q8IXQ5 586 aa11.18□□□□□ -0.62
PTPN2-203ENST00000353319 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.18□□□□□ -0.62
PTPN2-203ENST00000353319 ZMAT2Q96NC0 199 aaKnown RBP11.18□□□□□ -0.62
PTPN2-203ENST00000353319 ARHGAP39Q9C0H5 1083 aa11.18□□□□□ -0.62
PTPN2-203ENST00000353319 ELOVL4Q9GZR5 314 aa11.18□□□□□ -0.62
PTPN2-203ENST00000353319 SMYD3Q9H7B4 428 aa11.18□□□□□ -0.62
PTPN2-203ENST00000353319 GPBP1L1Q9HC44 474 aaPredicted RBP11.18□□□□□ -0.62
PTPN2-203ENST00000353319 IP6K2Q9UHH9 426 aa11.18□□□□□ -0.62
PTPN2-203ENST00000353319 STRIP2Q9ULQ0 834 aa11.18□□□□□ -0.62
PTPN2-203ENST00000353319 UBQLN1Q9UMX0 589 aaKnown RBP11.18□□□□□ -0.62
PTPN2-203ENST00000353319 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.18□□□□□ -0.62
PTPN2-203ENST00000353319 TRIP12Q14669 1992 aaPredicted RBP11.17□□□□□ -0.62
PTPN2-203ENST00000353319 SCN10AQ9Y5Y9 1956 aa11.17□□□□□ -0.62
PTPN2-203ENST00000353319 FAM187AA6NFU0 413 aa11.17□□□□□ -0.62
PTPN2-203ENST00000353319 TLR3O15455 904 aaKnown RBP11.17□□□□□ -0.62
PTPN2-203ENST00000353319 PSTPIP1O43586 416 aa11.17□□□□□ -0.62
PTPN2-203ENST00000353319 XPOTO43592 962 aaKnown RBP11.17□□□□□ -0.62
PTPN2-203ENST00000353319 ADAMTS4O75173 837 aa11.17□□□□□ -0.62
PTPN2-203ENST00000353319 CD4P01730 458 aa11.17□□□□□ -0.62
PTPN2-203ENST00000353319 RARBP10826 455 aa11.17□□□□□ -0.62
PTPN2-203ENST00000353319 CYP3A5P20815 502 aa11.17□□□□□ -0.62
PTPN2-203ENST00000353319 CST5P28325 142 aaPredicted RBP11.17□□□□□ -0.62
PTPN2-203ENST00000353319 CHRNA3P32297 505 aa11.17□□□□□ -0.62
PTPN2-203ENST00000353319 RAP1GAPP47736 663 aa11.17□□□□□ -0.62
PTPN2-203ENST00000353319 MARCKSL1P49006 195 aa11.17□□□□□ -0.62
PTPN2-203ENST00000353319 CBX1P83916 185 aa11.17□□□□□ -0.62
PTPN2-203ENST00000353319 GUCY2DQ02846 1103 aa11.17□□□□□ -0.62
PTPN2-203ENST00000353319 CACNB2Q08289 660 aaPredicted RBP11.17□□□□□ -0.62
PTPN2-203ENST00000353319 PAK2Q13177 524 aa11.17□□□□□ -0.62
PTPN2-203ENST00000353319 GPS2Q13227 327 aa11.17□□□□□ -0.62
PTPN2-203ENST00000353319 ZNF211Q13398 564 aaPredicted RBP11.17□□□□□ -0.62
PTPN2-203ENST00000353319 CUL1Q13616 776 aa11.17□□□□□ -0.62
PTPN2-203ENST00000353319 SMC1AQ14683 1233 aaKnown RBP11.17□□□□□ -0.62
PTPN2-203ENST00000353319 STILQ15468 1287 aa11.17□□□□□ -0.62
PTPN2-203ENST00000353319 NBPF20Q3BBV1 942 aa11.17□□□□□ -0.62
PTPN2-203ENST00000353319 DENND1BQ6P3S1 775 aa11.17□□□□□ -0.62
PTPN2-203ENST00000353319 SLC13A5Q86YT5 568 aaPredicted RBP11.17□□□□□ -0.62
PTPN2-203ENST00000353319 C1orf131Q8NDD1 294 aaKnown RBP11.17□□□□□ -0.62
PTPN2-203ENST00000353319 KLHDC9Q8NEP7 349 aa11.17□□□□□ -0.62
PTPN2-203ENST00000353319 DDX27Q96GQ7 796 aaKnown RBP11.17□□□□□ -0.62
PTPN2-203ENST00000353319 RUNDC3BQ96NL0 473 aa11.17□□□□□ -0.62
PTPN2-203ENST00000353319 TRIM7Q9C029 511 aa11.17□□□□□ -0.62
PTPN2-203ENST00000353319 TRIM6Q9C030 488 aaPredicted RBP11.17□□□□□ -0.62
PTPN2-203ENST00000353319 DDX47Q9H0S4 455 aaKnown RBP11.17□□□□□ -0.62
PTPN2-203ENST00000353319 ACBD3Q9H3P7 528 aa11.17□□□□□ -0.62
PTPN2-203ENST00000353319 WDR35Q9P2L0 1181 aa11.17□□□□□ -0.62
PTPN2-203ENST00000353319 NR2E1Q9Y466 385 aa11.17□□□□□ -0.62
PTPN2-203ENST00000353319 CASP8AP2Q9UKL3 1982 aa11.17□□□□□ -0.62
PTPN2-203ENST00000353319 PIRO00625 290 aa11.16□□□□□ -0.62
PTPN2-203ENST00000353319 RECQL4O94761 1208 aa11.16□□□□□ -0.62
PTPN2-203ENST00000353319 FAM163BP0C2L3 166 aa11.16□□□□□ -0.62
PTPN2-203ENST00000353319 CD19P15391 556 aa11.16□□□□□ -0.62
PTPN2-203ENST00000353319 GABRB2P47870 512 aa11.16□□□□□ -0.62
PTPN2-203ENST00000353319 AARSP49588 968 aaKnown RBP eCLIP11.16□□□□□ -0.62
PTPN2-203ENST00000353319 CARSP49589 748 aaKnown RBP11.16□□□□□ -0.62
PTPN2-203ENST00000353319 GUCY2FP51841 1108 aa11.16□□□□□ -0.62
PTPN2-203ENST00000353319 DRG2P55039 364 aaKnown RBP11.16□□□□□ -0.62
PTPN2-203ENST00000353319 MRPS25P82663 173 aaKnown RBP11.16□□□□□ -0.62
PTPN2-203ENST00000353319 MRPS6P82932 125 aaKnown RBP11.16□□□□□ -0.62
PTPN2-203ENST00000353319 SP3Q02447 781 aa11.16□□□□□ -0.62
PTPN2-203ENST00000353319 PRKCZQ05513 592 aa11.16□□□□□ -0.62
PTPN2-203ENST00000353319 DHX34Q14147 1143 aaKnown RBP11.16□□□□□ -0.62
PTPN2-203ENST00000353319 ZNF268Q14587 947 aaPredicted RBP11.16□□□□□ -0.62
PTPN2-203ENST00000353319 C2CD6Q53TS8 623 aa11.16□□□□□ -0.62
PTPN2-203ENST00000353319 LRRC38Q5VT99 294 aa11.16□□□□□ -0.62
PTPN2-203ENST00000353319 CCSAPQ6IQ19 270 aaPredicted RBP11.16□□□□□ -0.62
PTPN2-203ENST00000353319 RSPH3Q86UC2 560 aa11.16□□□□□ -0.62
PTPN2-203ENST00000353319 SERINC5Q86VE9 423 aa11.16□□□□□ -0.62
PTPN2-203ENST00000353319 UNC93AQ86WB7 457 aa11.16□□□□□ -0.62
PTPN2-203ENST00000353319 CPNE8Q86YQ8 564 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms