RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 PAIP2BQ9ULR5 123 aaKnown RBP8.04□□□□□ -1.12
BRCA1-201ENST00000352993 ZNF232Q9UNY5 417 aa8.04□□□□□ -1.12
BRCA1-201ENST00000352993 PCDHA1Q9Y5I3 950 aa8.04□□□□□ -1.12
BRCA1-201ENST00000352993 COL5A3P25940 1745 aaPredicted RBP8.03□□□□□ -1.12
BRCA1-201ENST00000352993 KAT6AQ92794 2004 aa8.03□□□□□ -1.12
BRCA1-201ENST00000352993 hCG_1984214I3L0E3 225 aa8.03□□□□□ -1.12
BRCA1-201ENST00000352993 SGK1O00141 431 aa8.03□□□□□ -1.12
BRCA1-201ENST00000352993 PIK3CDO00329 1044 aa8.03□□□□□ -1.12
BRCA1-201ENST00000352993 LDHCP07864 332 aa8.03□□□□□ -1.12
BRCA1-201ENST00000352993 SNAP25P60880 206 aa8.03□□□□□ -1.12
BRCA1-201ENST00000352993 USH1GQ495M9 461 aa8.03□□□□□ -1.12
BRCA1-201ENST00000352993 RABGAP1LQ5R372 815 aa8.03□□□□□ -1.12
BRCA1-201ENST00000352993 KLC3Q6P597 504 aa8.03□□□□□ -1.12
BRCA1-201ENST00000352993 DPP8Q6V1X1 898 aaPredicted RBP8.03□□□□□ -1.12
BRCA1-201ENST00000352993 FBXO33Q7Z6M2 555 aa8.03□□□□□ -1.12
BRCA1-201ENST00000352993 ULK2Q8IYT8 1036 aa8.03□□□□□ -1.12
BRCA1-201ENST00000352993 ZNF713Q8N859 430 aaPredicted RBP8.03□□□□□ -1.12
BRCA1-201ENST00000352993 GSTCDQ8NEC7 633 aa8.03□□□□□ -1.12
BRCA1-201ENST00000352993 SHCBP1LQ9BZQ2 653 aa8.03□□□□□ -1.12
BRCA1-201ENST00000352993 GINM1Q9NU53 330 aa8.03□□□□□ -1.12
BRCA1-201ENST00000352993 PCDHGA4Q9Y5G9 962 aa8.03□□□□□ -1.12
BRCA1-201ENST00000352993 GOLGA8IPA6NC78 632 aa8.03□□□□□ -1.12
BRCA1-201ENST00000352993 GOLGA8JA6NMD2 632 aa8.03□□□□□ -1.12
BRCA1-201ENST00000352993 PDLIM1O00151 329 aa8.03□□□□□ -1.12
BRCA1-201ENST00000352993 ZBTB39O15060 712 aa8.03□□□□□ -1.12
BRCA1-201ENST00000352993 DKC1O60832 514 aaKnown RBP eCLIP8.03□□□□□ -1.12
BRCA1-201ENST00000352993 RARBP10826 455 aa8.03□□□□□ -1.12
BRCA1-201ENST00000352993 KRT10P13645 584 aa8.03□□□□□ -1.12
BRCA1-201ENST00000352993 SSTR3P32745 418 aaPredicted RBP8.03□□□□□ -1.12
BRCA1-201ENST00000352993 BTDP43251 543 aa8.03□□□□□ -1.12
BRCA1-201ENST00000352993 LMNB2Q03252 620 aa8.03□□□□□ -1.12
BRCA1-201ENST00000352993 SFSWAPQ12872 951 aaKnown RBP8.03□□□□□ -1.12
BRCA1-201ENST00000352993 CBX3Q13185 183 aa8.03□□□□□ -1.12
BRCA1-201ENST00000352993 TTLL12Q14166 644 aaPredicted RBP8.03□□□□□ -1.12
BRCA1-201ENST00000352993 RASA3Q14644 834 aa8.03□□□□□ -1.12
BRCA1-201ENST00000352993 ZNF568Q3ZCX4 644 aa8.03□□□□□ -1.12
BRCA1-201ENST00000352993 ASPRV1Q53RT3 343 aa8.03□□□□□ -1.12
BRCA1-201ENST00000352993 HYIQ5T013 277 aa8.03□□□□□ -1.12
BRCA1-201ENST00000352993 LLGL2Q6P1M3 1020 aa8.03□□□□□ -1.12
BRCA1-201ENST00000352993 ARID3BQ8IVW6 561 aaPredicted RBP8.03□□□□□ -1.12
BRCA1-201ENST00000352993 PPP1R14CQ8TAE6 165 aa8.03□□□□□ -1.12
BRCA1-201ENST00000352993 RAB3IL1Q8TBN0 382 aa8.03□□□□□ -1.12
BRCA1-201ENST00000352993 ZNF398Q8TD17 642 aa8.03□□□□□ -1.12
BRCA1-201ENST00000352993 AZIN2Q96A70 460 aa8.03□□□□□ -1.12
BRCA1-201ENST00000352993 GCNAQ96QF7 691 aa8.03□□□□□ -1.12
BRCA1-201ENST00000352993 PANX3Q96QZ0 392 aa8.03□□□□□ -1.12
BRCA1-201ENST00000352993 NAP1L4Q99733 375 aaKnown RBP8.03□□□□□ -1.12
BRCA1-201ENST00000352993 SIKE1Q9BRV8 207 aa8.03□□□□□ -1.12
BRCA1-201ENST00000352993 AGPAT3Q9NRZ7 376 aa8.03□□□□□ -1.12
BRCA1-201ENST00000352993 TMOD2Q9NZR1 351 aa8.03□□□□□ -1.12
BRCA1-201ENST00000352993 KANSL3Q9P2N6 904 aa8.03□□□□□ -1.12
BRCA1-201ENST00000352993 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.03□□□□□ -1.12
BRCA1-201ENST00000352993 MAGEB3O15480 346 aa8.02□□□□□ -1.12
BRCA1-201ENST00000352993 DNAJC6O75061 913 aa8.02□□□□□ -1.12
BRCA1-201ENST00000352993 GAP43P17677 238 aa8.02□□□□□ -1.12
BRCA1-201ENST00000352993 RPA1P27694 616 aa8.02□□□□□ -1.12
BRCA1-201ENST00000352993 PHBP35232 272 aa8.02□□□□□ -1.12
BRCA1-201ENST00000352993 RGS2P41220 211 aa8.02□□□□□ -1.12
BRCA1-201ENST00000352993 GEMIN4P57678 1058 aaKnown RBP8.02□□□□□ -1.12
BRCA1-201ENST00000352993 RPS8P62241 208 aaKnown RBP8.02□□□□□ -1.12
BRCA1-201ENST00000352993 GSTO1P78417 241 aa8.02□□□□□ -1.12
BRCA1-201ENST00000352993 TMPRSS15P98073 1019 aa8.02□□□□□ -1.12
BRCA1-201ENST00000352993 TFDP1Q14186 410 aa8.02□□□□□ -1.12
BRCA1-201ENST00000352993 HIC1Q14526 733 aa8.02□□□□□ -1.12
BRCA1-201ENST00000352993 PDK3Q15120 406 aa8.02□□□□□ -1.12
BRCA1-201ENST00000352993 BBS9Q3SYG4 887 aa8.02□□□□□ -1.12
BRCA1-201ENST00000352993 SLC44A4Q53GD3 710 aa8.02□□□□□ -1.12
BRCA1-201ENST00000352993 ZCCHC9Q8N567 271 aaKnown RBP8.02□□□□□ -1.12
BRCA1-201ENST00000352993 ICA1LQ8NDH6 482 aa8.02□□□□□ -1.12
BRCA1-201ENST00000352993 OLIG1Q8TAK6 271 aa8.02□□□□□ -1.12
BRCA1-201ENST00000352993 GDPD5Q8WTR4 605 aa8.02□□□□□ -1.12
BRCA1-201ENST00000352993 CD101Q93033 1021 aa8.02□□□□□ -1.12
BRCA1-201ENST00000352993 SYT11Q9BT88 431 aa8.02□□□□□ -1.12
BRCA1-201ENST00000352993 FHDC1Q9C0D6 1143 aaPredicted RBP8.02□□□□□ -1.12
BRCA1-201ENST00000352993 GRIP2Q9C0E4 1043 aa8.02□□□□□ -1.12
BRCA1-201ENST00000352993 UVRAGQ9P2Y5 699 aa8.02□□□□□ -1.12
BRCA1-201ENST00000352993 GTF3C4Q9UKN8 822 aa8.02□□□□□ -1.12
BRCA1-201ENST00000352993 TDRKHQ9Y2W6 561 aaKnown RBP8.02□□□□□ -1.12
BRCA1-201ENST00000352993 ITGB4P16144 1822 aa8.02□□□□□ -1.13
BRCA1-201ENST00000352993 CLPTM1O96005 669 aa8.02□□□□□ -1.13
BRCA1-201ENST00000352993 HADHBP55084 474 aaKnown RBP8.02□□□□□ -1.13
BRCA1-201ENST00000352993 AQP4P55087 323 aa8.02□□□□□ -1.13
BRCA1-201ENST00000352993 NCOA4Q13772 614 aa8.02□□□□□ -1.13
BRCA1-201ENST00000352993 SFT2D3Q587I9 215 aa8.02□□□□□ -1.13
BRCA1-201ENST00000352993 HSP90AA5PQ58FG0 334 aa8.02□□□□□ -1.13
BRCA1-201ENST00000352993 RINT1Q6NUQ1 792 aa8.02□□□□□ -1.13
BRCA1-201ENST00000352993 IYDQ6PHW0 289 aa8.02□□□□□ -1.13
BRCA1-201ENST00000352993 B3GNT6Q6ZMB0 384 aa8.02□□□□□ -1.13
BRCA1-201ENST00000352993 TRIM67Q6ZTA4 783 aa8.02□□□□□ -1.13
BRCA1-201ENST00000352993 C3orf62Q6ZUJ4 267 aa8.02□□□□□ -1.13
BRCA1-201ENST00000352993 ACAD11Q709F0 780 aa8.02□□□□□ -1.13
BRCA1-201ENST00000352993 NET1Q7Z628 596 aaPredicted RBP8.02□□□□□ -1.13
BRCA1-201ENST00000352993 EPS8L1Q8TE68 723 aa8.02□□□□□ -1.13
BRCA1-201ENST00000352993 CPA5Q8WXQ8 436 aa8.02□□□□□ -1.13
BRCA1-201ENST00000352993 USP6NLQ92738 828 aa8.02□□□□□ -1.13
BRCA1-201ENST00000352993 DGCR14Q96DF8 476 aaKnown RBP8.02□□□□□ -1.13
BRCA1-201ENST00000352993 ACAP3Q96P50 834 aa8.02□□□□□ -1.13
BRCA1-201ENST00000352993 HAPLN3Q96S86 360 aa8.02□□□□□ -1.13
BRCA1-201ENST00000352993 KLHL4Q9C0H6 718 aa8.02□□□□□ -1.13
BRCA1-201ENST00000352993 RMI1Q9H9A7 625 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms