RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 GIPC1O14908 333 aa12.8□□□□□ -0.36
SMAD9-201ENST00000350148 SLURP2P0DP57 97 aa12.8□□□□□ -0.36
SMAD9-201ENST00000350148 KCNA2P16389 499 aa12.8□□□□□ -0.36
SMAD9-201ENST00000350148 LHX1P48742 406 aa12.8□□□□□ -0.36
SMAD9-201ENST00000350148 CDH6P55285 790 aa12.8□□□□□ -0.36
SMAD9-201ENST00000350148 ARPP19P56211 112 aa12.8□□□□□ -0.36
SMAD9-201ENST00000350148 PLCB4Q15147 1175 aa12.8□□□□□ -0.36
SMAD9-201ENST00000350148 PPP6R3Q5H9R7 873 aaPredicted RBP12.8□□□□□ -0.36
SMAD9-201ENST00000350148 USH1CQ9Y6N9 552 aa12.8□□□□□ -0.36
SMAD9-201ENST00000350148 EXOC1LA0A1B0GW35 172 aa12.8□□□□□ -0.36
SMAD9-201ENST00000350148 LRRIQ3A6PVS8 624 aaPredicted RBP12.8□□□□□ -0.36
SMAD9-201ENST00000350148 VEPH1Q14D04 833 aa12.8□□□□□ -0.36
SMAD9-201ENST00000350148 RASIP1Q5U651 963 aa12.8□□□□□ -0.36
SMAD9-201ENST00000350148 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.8□□□□□ -0.36
SMAD9-201ENST00000350148 ZDHHC17Q8IUH5 632 aa12.8□□□□□ -0.36
SMAD9-201ENST00000350148 SCN4BQ8IWT1 228 aa12.8□□□□□ -0.36
SMAD9-201ENST00000350148 PI4K2AQ9BTU6 479 aa12.8□□□□□ -0.36
SMAD9-201ENST00000350148 TRAIPQ9BWF2 469 aa12.8□□□□□ -0.36
SMAD9-201ENST00000350148 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.8□□□□□ -0.36
SMAD9-201ENST00000350148 KLHL14Q9P2G3 628 aa12.8□□□□□ -0.36
SMAD9-201ENST00000350148 TRPV2Q9Y5S1 764 aa12.8□□□□□ -0.36
SMAD9-201ENST00000350148 MAST2Q6P0Q8 1798 aa12.79□□□□□ -0.36
SMAD9-201ENST00000350148 FBXO21O94952 628 aa12.79□□□□□ -0.36
SMAD9-201ENST00000350148 SNCBQ16143 134 aa12.79□□□□□ -0.36
SMAD9-201ENST00000350148 GOLGA7BQ2TAP0 167 aa12.79□□□□□ -0.36
SMAD9-201ENST00000350148 TRMT10CQ7L0Y3 403 aaKnown RBP12.79□□□□□ -0.36
SMAD9-201ENST00000350148 SRLQ86TD4 932 aa12.79□□□□□ -0.36
SMAD9-201ENST00000350148 CCT6BQ92526 530 aa12.79□□□□□ -0.36
SMAD9-201ENST00000350148 COLEC11Q9BWP8 271 aa12.79□□□□□ -0.36
SMAD9-201ENST00000350148 HEMGNQ9BXL5 484 aa12.79□□□□□ -0.36
SMAD9-201ENST00000350148 MYH2Q9UKX2 1941 aa12.79□□□□□ -0.36
SMAD9-201ENST00000350148 A0A087WUV0 522 aaPredicted RBP12.79□□□□□ -0.36
SMAD9-201ENST00000350148 IRX1P78414 480 aaPredicted RBP12.79□□□□□ -0.36
SMAD9-201ENST00000350148 FSCN1Q16658 493 aaKnown RBP12.79□□□□□ -0.36
SMAD9-201ENST00000350148 HEATR6Q6AI08 1181 aaKnown RBP12.79□□□□□ -0.36
SMAD9-201ENST00000350148 TTC1Q99614 292 aa12.79□□□□□ -0.36
SMAD9-201ENST00000350148 PLAAQ9Y263 795 aa12.79□□□□□ -0.36
SMAD9-201ENST00000350148 THSD7AQ9UPZ6 1657 aa12.79□□□□□ -0.36
SMAD9-201ENST00000350148 CTSHP09668 335 aa12.79□□□□□ -0.36
SMAD9-201ENST00000350148 SHROOM1Q2M3G4 852 aaPredicted RBP12.79□□□□□ -0.36
SMAD9-201ENST00000350148 ANKRD42Q8N9B4 389 aa12.79□□□□□ -0.36
SMAD9-201ENST00000350148 CCDC68Q9H2F9 335 aa12.79□□□□□ -0.36
SMAD9-201ENST00000350148 KANSL3Q9P2N6 904 aa12.79□□□□□ -0.36
SMAD9-201ENST00000350148 C4AP0C0L4 1744 aa12.79□□□□□ -0.36
SMAD9-201ENST00000350148 F8W8V4 182 aa12.79□□□□□ -0.36
SMAD9-201ENST00000350148 ATP9AO75110 1047 aa12.79□□□□□ -0.36
SMAD9-201ENST00000350148 TADA2AO75478 443 aa12.79□□□□□ -0.36
SMAD9-201ENST00000350148 VTNP04004 478 aa12.79□□□□□ -0.36
SMAD9-201ENST00000350148 PLEKP08567 350 aaPredicted RBP12.79□□□□□ -0.36
SMAD9-201ENST00000350148 WEE2P0C1S8 567 aa12.79□□□□□ -0.36
SMAD9-201ENST00000350148 PAMP19021 973 aa12.79□□□□□ -0.36
SMAD9-201ENST00000350148 MX2P20592 715 aa12.79□□□□□ -0.36
SMAD9-201ENST00000350148 NOGQ13253 232 aa12.79□□□□□ -0.36
SMAD9-201ENST00000350148 ECM1Q16610 540 aa12.79□□□□□ -0.36
SMAD9-201ENST00000350148 MEI1Q5TIA1 1274 aa12.79□□□□□ -0.36
SMAD9-201ENST00000350148 CCNI2Q6ZMN8 369 aaPredicted RBP12.79□□□□□ -0.36
SMAD9-201ENST00000350148 ZNF467Q7Z7K2 595 aaPredicted RBP12.79□□□□□ -0.36
SMAD9-201ENST00000350148 GSPT2Q8IYD1 628 aaKnown RBP12.79□□□□□ -0.36
SMAD9-201ENST00000350148 VPS52Q8N1B4 723 aa12.79□□□□□ -0.36
SMAD9-201ENST00000350148 ASAP3Q8TDY4 903 aa12.79□□□□□ -0.36
SMAD9-201ENST00000350148 MCEEQ96PE7 176 aa12.79□□□□□ -0.36
SMAD9-201ENST00000350148 THAP2Q9H0W7 228 aa12.79□□□□□ -0.36
SMAD9-201ENST00000350148 TRIM10Q9UDY6 481 aa12.79□□□□□ -0.36
SMAD9-201ENST00000350148 PACSIN2Q9UNF0 486 aaPredicted RBP12.79□□□□□ -0.36
SMAD9-201ENST00000350148 NAV1Q8NEY1 1877 aa12.79□□□□□ -0.36
SMAD9-201ENST00000350148 BCAT1P54687 386 aa12.79□□□□□ -0.36
SMAD9-201ENST00000350148 SMYD5Q6GMV2 418 aa12.79□□□□□ -0.36
SMAD9-201ENST00000350148 DNAAF3Q8N9W5 541 aa12.79□□□□□ -0.36
SMAD9-201ENST00000350148 LRRC8CQ8TDW0 803 aa12.79□□□□□ -0.36
SMAD9-201ENST00000350148 TMEM176AQ96HP8 235 aa12.79□□□□□ -0.36
SMAD9-201ENST00000350148 MFSD14AQ96MC6 490 aa12.79□□□□□ -0.36
SMAD9-201ENST00000350148 OSBPL8Q9BZF1 889 aa12.79□□□□□ -0.36
SMAD9-201ENST00000350148 GANQ9H2C0 597 aa12.79□□□□□ -0.36
SMAD9-201ENST00000350148 PCSK1NQ9UHG2 260 aa12.79□□□□□ -0.36
SMAD9-201ENST00000350148 MT-ND3P03897 115 aa12.78□□□□□ -0.36
SMAD9-201ENST00000350148 FAM200BP0CF97 657 aa12.78□□□□□ -0.36
SMAD9-201ENST00000350148 ADCYAP1R1P41586 468 aa12.78□□□□□ -0.36
SMAD9-201ENST00000350148 BBS9Q3SYG4 887 aa12.78□□□□□ -0.36
SMAD9-201ENST00000350148 DUSP28Q4G0W2 176 aa12.78□□□□□ -0.36
SMAD9-201ENST00000350148 CCDC62Q6P9F0 684 aa12.78□□□□□ -0.36
SMAD9-201ENST00000350148 TACO1Q9BSH4 297 aaKnown RBP12.78□□□□□ -0.36
SMAD9-201ENST00000350148 PFDN4Q9NQP4 134 aa12.78□□□□□ -0.36
SMAD9-201ENST00000350148 CISHQ9NSE2 258 aa12.78□□□□□ -0.36
SMAD9-201ENST00000350148 BARX2Q9UMQ3 279 aaPredicted RBP12.78□□□□□ -0.36
SMAD9-201ENST00000350148 MROH7Q68CQ1 1323 aa12.78□□□□□ -0.36
SMAD9-201ENST00000350148 PHF20L1A8MW92 1017 aa12.78□□□□□ -0.36
SMAD9-201ENST00000350148 POC1B-GALNT4F8VUJ3 575 aa12.78□□□□□ -0.36
SMAD9-201ENST00000350148 H7C4K7 107 aa12.78□□□□□ -0.36
SMAD9-201ENST00000350148 MTSS1O43312 755 aa12.78□□□□□ -0.36
SMAD9-201ENST00000350148 KRT37O76014 449 aa12.78□□□□□ -0.36
SMAD9-201ENST00000350148 ZNF286BP0CG31 522 aa12.78□□□□□ -0.36
SMAD9-201ENST00000350148 NR1D1P20393 614 aa12.78□□□□□ -0.36
SMAD9-201ENST00000350148 THPOP40225 353 aa12.78□□□□□ -0.36
SMAD9-201ENST00000350148 POU5F1Q01860 360 aaKnown RBP12.78□□□□□ -0.36
SMAD9-201ENST00000350148 TMEM62Q0P6H9 643 aa12.78□□□□□ -0.36
SMAD9-201ENST00000350148 SPRYD7Q5W111 196 aa12.78□□□□□ -0.36
SMAD9-201ENST00000350148 TRIM68Q6AZZ1 485 aa12.78□□□□□ -0.36
SMAD9-201ENST00000350148 WDR93Q6P2C0 686 aa12.78□□□□□ -0.36
SMAD9-201ENST00000350148 ANO5Q75V66 913 aa12.78□□□□□ -0.36
SMAD9-201ENST00000350148 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms