RNA–Protein interactions for RNA: ENST00000345519.9

CLTA-202, Transcript of clathrin light chain A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLTA, Length 1,073 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-202ENST00000345519 SMARCB1Q12824 385 aa21.34■■□□□ 1.01
CLTA-202ENST00000345519 PNOCQ13519 176 aa21.34■■□□□ 1.01
CLTA-202ENST00000345519 MTMR3Q13615 1198 aa21.34■■□□□ 1.01
CLTA-202ENST00000345519 PRSS36Q5K4E3 855 aa21.34■■□□□ 1.01
CLTA-202ENST00000345519 WSCD1Q658N2 575 aa21.34■■□□□ 1.01
CLTA-202ENST00000345519 LMBRD2Q68DH5 695 aaPredicted RBP21.34■■□□□ 1.01
CLTA-202ENST00000345519 CENPPQ6IPU0 288 aa21.34■■□□□ 1.01
CLTA-202ENST00000345519 TRAPPC11Q7Z392 1133 aa21.34■■□□□ 1.01
CLTA-202ENST00000345519 PDCL2Q8N4E4 241 aa21.34■■□□□ 1.01
CLTA-202ENST00000345519 C2orf15Q8WU43 125 aaKnown RBP21.34■■□□□ 1.01
CLTA-202ENST00000345519 NXPE3Q969Y0 559 aa21.34■■□□□ 1.01
CLTA-202ENST00000345519 ASIC4Q96FT7 647 aa21.34■■□□□ 1.01
CLTA-202ENST00000345519 TMEM209Q96SK2 561 aa21.34■■□□□ 1.01
CLTA-202ENST00000345519 HCFC1R1Q9NWW0 138 aa21.34■■□□□ 1.01
CLTA-202ENST00000345519 IGSF9Q9P2J2 1179 aa21.34■■□□□ 1.01
CLTA-202ENST00000345519 YIPF1Q9Y548 306 aa21.34■■□□□ 1.01
CLTA-202ENST00000345519 PRRG1O14668 218 aa21.33■■□□□ 1.01
CLTA-202ENST00000345519 EXOC3O60645 756 aa21.33■■□□□ 1.01
CLTA-202ENST00000345519 FSHRP23945 695 aa21.33■■□□□ 1.01
CLTA-202ENST00000345519 ELF1P32519 619 aa21.33■■□□□ 1.01
CLTA-202ENST00000345519 PABPC1LQ4VXU2 614 aaKnown RBP21.33■■□□□ 1.01
CLTA-202ENST00000345519 TRIM67Q6ZTA4 783 aa21.33■■□□□ 1.01
CLTA-202ENST00000345519 RDH13Q8NBN7 331 aa21.33■■□□□ 1.01
CLTA-202ENST00000345519 ZNF516Q92618 1163 aa21.33■■□□□ 1.01
CLTA-202ENST00000345519 FNBP1Q96RU3 617 aa21.33■■□□□ 1.01
CLTA-202ENST00000345519 PKMYT1Q99640 499 aa21.33■■□□□ 1.01
CLTA-202ENST00000345519 VRTNQ9H8Y1 702 aa21.33■■□□□ 1.01
CLTA-202ENST00000345519 KCNK12Q9HB15 430 aa21.33■■□□□ 1.01
CLTA-202ENST00000345519 LIMD1Q9UGP4 676 aa21.33■■□□□ 1.01
CLTA-202ENST00000345519 ZDBF2Q9HCK1 2354 aa21.32■■□□□ 1
CLTA-202ENST00000345519 LRG1P02750 347 aa21.32■■□□□ 1
CLTA-202ENST00000345519 AP3M2P53677 418 aa21.32■■□□□ 1
CLTA-202ENST00000345519 ARPP19P56211 112 aa21.32■■□□□ 1
CLTA-202ENST00000345519 NTHL1P78549 312 aa21.32■■□□□ 1
CLTA-202ENST00000345519 SLC5A9Q2M3M2 681 aa21.32■■□□□ 1
CLTA-202ENST00000345519 SOWAHAQ2M3V2 549 aa21.32■■□□□ 1
CLTA-202ENST00000345519 GET4Q7L5D6 327 aaPredicted RBP21.32■■□□□ 1
CLTA-202ENST00000345519 METTL23Q86XA0 190 aa21.32■■□□□ 1
CLTA-202ENST00000345519 NOC3LQ8WTT2 800 aaKnown RBP21.32■■□□□ 1
CLTA-202ENST00000345519 ACBD6Q9BR61 282 aa21.32■■□□□ 1
CLTA-202ENST00000345519 DNAJC25Q9H1X3 360 aa21.32■■□□□ 1
CLTA-202ENST00000345519 RMND1Q9NWS8 449 aa21.32■■□□□ 1
CLTA-202ENST00000345519 CHMP5Q9NZZ3 219 aa21.32■■□□□ 1
CLTA-202ENST00000345519 CEP72Q9P209 647 aa21.32■■□□□ 1
CLTA-202ENST00000345519 CDH7Q9ULB5 785 aa21.32■■□□□ 1
CLTA-202ENST00000345519 DUSP12Q9UNI6 340 aa21.32■■□□□ 1
CLTA-202ENST00000345519 CALUO43852 315 aaPredicted RBP21.31■■□□□ 1
CLTA-202ENST00000345519 ASGR2P07307 311 aa21.31■■□□□ 1
CLTA-202ENST00000345519 RHOP08100 348 aa21.31■■□□□ 1
CLTA-202ENST00000345519 DLATP10515 647 aaKnown RBP21.31■■□□□ 1
CLTA-202ENST00000345519 PTPN2P17706 415 aa21.31■■□□□ 1
CLTA-202ENST00000345519 MYO1EQ12965 1108 aa21.31■■□□□ 1
CLTA-202ENST00000345519 HTR4Q13639 388 aa21.31■■□□□ 1
CLTA-202ENST00000345519 EDRF1Q3B7T1 1238 aa21.31■■□□□ 1
CLTA-202ENST00000345519 NPAS3Q8IXF0 933 aa21.31■■□□□ 1
CLTA-202ENST00000345519 LEMD2Q8NC56 503 aa21.31■■□□□ 1
CLTA-202ENST00000345519 ITFG1Q8TB96 612 aa21.31■■□□□ 1
CLTA-202ENST00000345519 TMC2Q8TDI7 906 aa21.31■■□□□ 1
CLTA-202ENST00000345519 KBTBD7Q8WVZ9 684 aa21.31■■□□□ 1
CLTA-202ENST00000345519 FGF13Q92913 245 aa21.31■■□□□ 1
CLTA-202ENST00000345519 HPDLQ96IR7 371 aa21.31■■□□□ 1
CLTA-202ENST00000345519 LRRC3Q9BY71 257 aa21.31■■□□□ 1
CLTA-202ENST00000345519 XYLT2Q9H1B5 865 aa21.31■■□□□ 1
CLTA-202ENST00000345519 MIA3Q5JRA6 1907 aa21.3■■□□□ 1
CLTA-202ENST00000345519 FAM86C2PA6NEL3 165 aa21.3■■□□□ 1
CLTA-202ENST00000345519 LRRIQ3A6PVS8 624 aaPredicted RBP21.3■■□□□ 1
CLTA-202ENST00000345519 HUS1O60921 280 aa21.3■■□□□ 1
CLTA-202ENST00000345519 CST3P01034 146 aaPredicted RBP21.3■■□□□ 1
CLTA-202ENST00000345519 KRT19P08727 400 aa21.3■■□□□ 1
CLTA-202ENST00000345519 FAM163BP0C2L3 166 aa21.3■■□□□ 1
CLTA-202ENST00000345519 TNNI1P19237 187 aa21.3■■□□□ 1
CLTA-202ENST00000345519 GBP2P32456 591 aaPredicted RBP21.3■■□□□ 1
CLTA-202ENST00000345519 CASP4P49662 377 aa21.3■■□□□ 1
CLTA-202ENST00000345519 TWF1Q12792 350 aa21.3■■□□□ 1
CLTA-202ENST00000345519 BFSP1Q12934 665 aa21.3■■□□□ 1
CLTA-202ENST00000345519 DUSP4Q13115 394 aa21.3■■□□□ 1
CLTA-202ENST00000345519 PLD1Q13393 1074 aa21.3■■□□□ 1
CLTA-202ENST00000345519 TDGQ13569 410 aa21.3■■□□□ 1
CLTA-202ENST00000345519 ZNF658Q5TYW1 1059 aaPredicted RBP21.3■■□□□ 1
CLTA-202ENST00000345519 LRRTM3Q86VH5 581 aa21.3■■□□□ 1
CLTA-202ENST00000345519 TMC8Q8IU68 726 aa21.3■■□□□ 1
CLTA-202ENST00000345519 ZC3H3Q8IXZ2 948 aaKnown RBP21.3■■□□□ 1
CLTA-202ENST00000345519 THEM5Q8N1Q8 247 aa21.3■■□□□ 1
CLTA-202ENST00000345519 SPPL2BQ8TCT7 592 aa21.3■■□□□ 1
CLTA-202ENST00000345519 CCDC127Q96BQ5 260 aa21.3■■□□□ 1
CLTA-202ENST00000345519 PGLYRP2Q96PD5 576 aa21.3■■□□□ 1
CLTA-202ENST00000345519 GTPBP4Q9BZE4 634 aaKnown RBP21.3■■□□□ 1
CLTA-202ENST00000345519 SNX9Q9Y5X1 595 aa21.3■■□□□ 1
CLTA-202ENST00000345519 MYH10P35580 1976 aa21.3■■□□□ 1
CLTA-202ENST00000345519 TICRRQ7Z2Z1 1910 aa21.29■■□□□ 1
CLTA-202ENST00000345519 IKBKBO14920 756 aa21.29■■□□□ 1
CLTA-202ENST00000345519 C4BPAP04003 597 aaKnown RBP21.29■■□□□ 1
CLTA-202ENST00000345519 NR2F2P24468 414 aa21.29■■□□□ 1
CLTA-202ENST00000345519 LHX1P48742 406 aa21.29■■□□□ 1
CLTA-202ENST00000345519 SLC39A12Q504Y0 691 aa21.29■■□□□ 1
CLTA-202ENST00000345519 C1orf220Q5T0J3 134 aa21.29■■□□□ 1
CLTA-202ENST00000345519 TDRD10Q5VZ19 366 aaKnown RBP21.29■■□□□ 1
CLTA-202ENST00000345519 POTEHQ6S545 545 aa21.29■■□□□ 1
CLTA-202ENST00000345519 OSTM1Q86WC4 334 aa21.29■■□□□ 1
CLTA-202ENST00000345519 TTC9BQ8N6N2 239 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms