RNA–Protein interactions for RNA: ENST00000345317.6

SKAP2-201, Transcript of src kinase associated phosphoprotein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKAP2, Length 3,998 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKAP2-201ENST00000345317 H3BQF6 201 aa9.15□□□□□ -0.94
SKAP2-201ENST00000345317 GPR25O00155 361 aa9.15□□□□□ -0.94
SKAP2-201ENST00000345317 CREB3O43889 395 aa9.15□□□□□ -0.94
SKAP2-201ENST00000345317 SMIM10L2AP0DMW4 78 aa9.15□□□□□ -0.94
SKAP2-201ENST00000345317 SMIM10L2BP0DMW5 78 aa9.15□□□□□ -0.94
SKAP2-201ENST00000345317 CDH6P55285 790 aa9.15□□□□□ -0.94
SKAP2-201ENST00000345317 FMO1Q01740 532 aa9.15□□□□□ -0.94
SKAP2-201ENST00000345317 SREBF2Q12772 1141 aa9.15□□□□□ -0.94
SKAP2-201ENST00000345317 NNTQ13423 1086 aa9.15□□□□□ -0.94
SKAP2-201ENST00000345317 ZPBP2Q6X784 338 aa9.15□□□□□ -0.94
SKAP2-201ENST00000345317 WDR49Q8IV35 697 aa9.15□□□□□ -0.94
SKAP2-201ENST00000345317 FIZ1Q96SL8 496 aa9.15□□□□□ -0.94
SKAP2-201ENST00000345317 PCYT2Q99447 389 aa9.15□□□□□ -0.94
SKAP2-201ENST00000345317 NT5C1AQ9BXI3 368 aa9.15□□□□□ -0.94
SKAP2-201ENST00000345317 FBXL5Q9UKA1 691 aa9.15□□□□□ -0.94
SKAP2-201ENST00000345317 NOVA2Q9UNW9 492 aaKnown RBP9.15□□□□□ -0.94
SKAP2-201ENST00000345317 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.15□□□□□ -0.94
SKAP2-201ENST00000345317 MAD1L1Q9Y6D9 718 aa9.15□□□□□ -0.94
SKAP2-201ENST00000345317 KIAA1551Q9HCM1 1747 aa9.15□□□□□ -0.94
SKAP2-201ENST00000345317 RRN3P2A6NIE6 340 aa9.15□□□□□ -0.94
SKAP2-201ENST00000345317 PSEN2P49810 448 aa9.15□□□□□ -0.94
SKAP2-201ENST00000345317 SNX16P57768 344 aa9.15□□□□□ -0.94
SKAP2-201ENST00000345317 PTENP60484 403 aa9.15□□□□□ -0.94
SKAP2-201ENST00000345317 FAM110CQ1W6H9 321 aa9.15□□□□□ -0.94
SKAP2-201ENST00000345317 MTHFD1LQ6UB35 978 aa9.15□□□□□ -0.94
SKAP2-201ENST00000345317 C12orf29Q8N999 325 aa9.15□□□□□ -0.94
SKAP2-201ENST00000345317 CALR3Q96L12 384 aaKnown RBP9.15□□□□□ -0.94
SKAP2-201ENST00000345317 FERMT1Q9BQL6 677 aa9.15□□□□□ -0.94
SKAP2-201ENST00000345317 WNT8AQ9H1J5 351 aa9.15□□□□□ -0.94
SKAP2-201ENST00000345317 DHX35Q9H5Z1 703 aaKnown RBP9.15□□□□□ -0.94
SKAP2-201ENST00000345317 GPATCH2LQ9NWQ4 482 aa9.15□□□□□ -0.94
SKAP2-201ENST00000345317 CACNG4Q9UBN1 327 aa9.15□□□□□ -0.94
SKAP2-201ENST00000345317 FAM169AQ9Y6X4 670 aa9.15□□□□□ -0.94
SKAP2-201ENST00000345317 I3L4J1 428 aa9.15□□□□□ -0.95
SKAP2-201ENST00000345317 RECQL4O94761 1208 aa9.15□□□□□ -0.95
SKAP2-201ENST00000345317 B3GAT3O94766 335 aa9.15□□□□□ -0.95
SKAP2-201ENST00000345317 MYBL2P10244 700 aa9.15□□□□□ -0.95
SKAP2-201ENST00000345317 PYGMP11217 842 aa9.15□□□□□ -0.95
SKAP2-201ENST00000345317 SDC4P31431 198 aa9.15□□□□□ -0.95
SKAP2-201ENST00000345317 ARL2P36404 184 aa9.15□□□□□ -0.95
SKAP2-201ENST00000345317 PRKCIP41743 596 aa9.15□□□□□ -0.95
SKAP2-201ENST00000345317 NDST1P52848 882 aa9.15□□□□□ -0.95
SKAP2-201ENST00000345317 AP3M2P53677 418 aa9.15□□□□□ -0.95
SKAP2-201ENST00000345317 BCAR1P56945 870 aa9.15□□□□□ -0.95
SKAP2-201ENST00000345317 GOLGA7BQ2TAP0 167 aa9.15□□□□□ -0.95
SKAP2-201ENST00000345317 BBS9Q3SYG4 887 aa9.15□□□□□ -0.95
SKAP2-201ENST00000345317 CCDC38Q502W7 563 aa9.15□□□□□ -0.95
SKAP2-201ENST00000345317 PLPPR4Q7Z2D5 763 aa9.15□□□□□ -0.95
SKAP2-201ENST00000345317 MAIP1Q8WWC4 291 aa9.15□□□□□ -0.95
SKAP2-201ENST00000345317 SHC3Q92529 594 aa9.15□□□□□ -0.95
SKAP2-201ENST00000345317 ZNF516Q92618 1163 aa9.15□□□□□ -0.95
SKAP2-201ENST00000345317 LPPQ93052 612 aa9.15□□□□□ -0.95
SKAP2-201ENST00000345317 NXF3Q9H4D5 531 aaKnown RBP9.15□□□□□ -0.95
SKAP2-201ENST00000345317 C10orf88Q9H8K7 445 aa9.15□□□□□ -0.95
SKAP2-201ENST00000345317 FAM114A2Q9NRY5 505 aa9.15□□□□□ -0.95
SKAP2-201ENST00000345317 UVRAGQ9P2Y5 699 aa9.15□□□□□ -0.95
SKAP2-201ENST00000345317 LRFN2Q9ULH4 789 aa9.15□□□□□ -0.95
SKAP2-201ENST00000345317 ICAM3P32942 547 aa9.14□□□□□ -0.95
SKAP2-201ENST00000345317 KRT17Q04695 432 aa9.14□□□□□ -0.95
SKAP2-201ENST00000345317 DUSP28Q4G0W2 176 aa9.14□□□□□ -0.95
SKAP2-201ENST00000345317 IQSEC1Q6DN90 963 aa9.14□□□□□ -0.95
SKAP2-201ENST00000345317 NT5DC3Q86UY8 548 aa9.14□□□□□ -0.95
SKAP2-201ENST00000345317 FAM71AQ8IYT1 594 aa9.14□□□□□ -0.95
SKAP2-201ENST00000345317 CCDC63Q8NA47 563 aa9.14□□□□□ -0.95
SKAP2-201ENST00000345317 APPL2Q8NEU8 664 aa9.14□□□□□ -0.95
SKAP2-201ENST00000345317 ZSWIM1Q9BR11 485 aa9.14□□□□□ -0.95
SKAP2-201ENST00000345317 SIK2Q9H0K1 926 aa9.14□□□□□ -0.95
SKAP2-201ENST00000345317 IP6K2Q9UHH9 426 aa9.14□□□□□ -0.95
SKAP2-201ENST00000345317 ECM29Q5VYK3 1845 aa9.14□□□□□ -0.95
SKAP2-201ENST00000345317 IL18RAPO95256 599 aa9.14□□□□□ -0.95
SKAP2-201ENST00000345317 EIF4BP23588 611 aaKnown RBP9.14□□□□□ -0.95
SKAP2-201ENST00000345317 HNRNPH1P31943 449 aaKnown RBP9.14□□□□□ -0.95
SKAP2-201ENST00000345317 RPL7AP62424 266 aaKnown RBP9.14□□□□□ -0.95
SKAP2-201ENST00000345317 CLEC16AQ2KHT3 1053 aa9.14□□□□□ -0.95
SKAP2-201ENST00000345317 BEND6Q5SZJ8 279 aaPredicted RBP9.14□□□□□ -0.95
SKAP2-201ENST00000345317 RUFY4Q6ZNE9 571 aa9.14□□□□□ -0.95
SKAP2-201ENST00000345317 SUGP1Q8IWZ8 645 aaKnown RBP9.14□□□□□ -0.95
SKAP2-201ENST00000345317 PALM2Q8IXS6 379 aa9.14□□□□□ -0.95
SKAP2-201ENST00000345317 MCOLN2Q8IZK6 566 aa9.14□□□□□ -0.95
SKAP2-201ENST00000345317 ABRAQ8N0Z2 381 aa9.14□□□□□ -0.95
SKAP2-201ENST00000345317 FEZF2Q8TBJ5 459 aa9.14□□□□□ -0.95
SKAP2-201ENST00000345317 CASKIN2Q8WXE0 1202 aa9.14□□□□□ -0.95
SKAP2-201ENST00000345317 C18orf25Q96B23 403 aaPredicted RBP9.14□□□□□ -0.95
SKAP2-201ENST00000345317 XPNPEP3Q9NQH7 507 aa9.14□□□□□ -0.95
SKAP2-201ENST00000345317 KCNH4Q9UQ05 1017 aa9.14□□□□□ -0.95
SKAP2-201ENST00000345317 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.14□□□□□ -0.95
SKAP2-201ENST00000345317 COL11A2P13942 1736 aaPredicted RBP9.14□□□□□ -0.95
SKAP2-201ENST00000345317 MOCS2O96007 188 aaPredicted RBP9.14□□□□□ -0.95
SKAP2-201ENST00000345317 MMP3P08254 477 aa9.14□□□□□ -0.95
SKAP2-201ENST00000345317 CFHP08603 1231 aa9.14□□□□□ -0.95
SKAP2-201ENST00000345317 GNL1P36915 607 aaPredicted RBP9.14□□□□□ -0.95
SKAP2-201ENST00000345317 GCNT1Q02742 428 aa9.14□□□□□ -0.95
SKAP2-201ENST00000345317 GPS1Q13098 491 aa9.14□□□□□ -0.95
SKAP2-201ENST00000345317 TRIM72Q6ZMU5 477 aa9.14□□□□□ -0.95
SKAP2-201ENST00000345317 MAP7D3Q8IWC1 876 aa9.14□□□□□ -0.95
SKAP2-201ENST00000345317 HELQQ8TDG4 1101 aa9.14□□□□□ -0.95
SKAP2-201ENST00000345317 GRK7Q8WTQ7 553 aa9.14□□□□□ -0.95
SKAP2-201ENST00000345317 MFSD14AQ96MC6 490 aa9.14□□□□□ -0.95
SKAP2-201ENST00000345317 KATNAL1Q9BW62 490 aa9.14□□□□□ -0.95
SKAP2-201ENST00000345317 FUT8Q9BYC5 575 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms