RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 NT5DC4Q86YG4 428 aa14.44□□□□□ -0.1
CDC42-202ENST00000344548 CD302Q8IX05 232 aa14.44□□□□□ -0.1
CDC42-202ENST00000344548 USP38Q8NB14 1042 aa14.44□□□□□ -0.1
CDC42-202ENST00000344548 MIOSQ9NXC5 875 aa14.44□□□□□ -0.1
CDC42-202ENST00000344548 PDCD11Q14690 1871 aaKnown RBP14.44□□□□□ -0.1
CDC42-202ENST00000344548 MYCP01106 439 aaPredicted RBP14.44□□□□□ -0.1
CDC42-202ENST00000344548 HOXD10P28358 340 aa14.44□□□□□ -0.1
CDC42-202ENST00000344548 PAFAH1B1P43034 410 aa14.44□□□□□ -0.1
CDC42-202ENST00000344548 PEX5P50542 639 aa14.44□□□□□ -0.1
CDC42-202ENST00000344548 DPH6Q7L8W6 267 aa14.44□□□□□ -0.1
CDC42-202ENST00000344548 MMGT1Q8N4V1 131 aa14.44□□□□□ -0.1
CDC42-202ENST00000344548 PXYLP1Q8TE99 480 aa14.44□□□□□ -0.1
CDC42-202ENST00000344548 TMEM176AQ96HP8 235 aa14.44□□□□□ -0.1
CDC42-202ENST00000344548 TRPV6Q9H1D0 765 aa14.44□□□□□ -0.1
CDC42-202ENST00000344548 TMEM59LQ9UK28 342 aa14.44□□□□□ -0.1
CDC42-202ENST00000344548 RAB21Q9UL25 225 aa14.44□□□□□ -0.1
CDC42-202ENST00000344548 TCRBV5S1A1TA0A578 114 aa14.43□□□□□ -0.1
CDC42-202ENST00000344548 MYBL2P10244 700 aa14.43□□□□□ -0.1
CDC42-202ENST00000344548 CDR1P51861 262 aa14.43□□□□□ -0.1
CDC42-202ENST00000344548 PTPN11Q06124 597 aaPredicted RBP14.43□□□□□ -0.1
CDC42-202ENST00000344548 LLGL1Q15334 1064 aa14.43□□□□□ -0.1
CDC42-202ENST00000344548 TRIM71Q2Q1W2 868 aaKnown RBP14.43□□□□□ -0.1
CDC42-202ENST00000344548 PTPN20Q4JDL3 420 aa14.43□□□□□ -0.1
CDC42-202ENST00000344548 CYP4A22Q5TCH4 519 aa14.43□□□□□ -0.1
CDC42-202ENST00000344548 TRIM72Q6ZMU5 477 aa14.43□□□□□ -0.1
CDC42-202ENST00000344548 ZDHHC14Q8IZN3 488 aa14.43□□□□□ -0.1
CDC42-202ENST00000344548 RASGEF1CQ8N431 466 aa14.43□□□□□ -0.1
CDC42-202ENST00000344548 SH3TC2Q8TF17 1288 aa14.43□□□□□ -0.1
CDC42-202ENST00000344548 AVENQ9NQS1 362 aaPredicted RBP14.43□□□□□ -0.1
CDC42-202ENST00000344548 UVRAGQ9P2Y5 699 aa14.43□□□□□ -0.1
CDC42-202ENST00000344548 PADI3Q9ULW8 664 aa14.43□□□□□ -0.1
CDC42-202ENST00000344548 PCDHGC3Q9UN70 934 aa14.43□□□□□ -0.1
CDC42-202ENST00000344548 DERAQ9Y315 318 aa14.43□□□□□ -0.1
CDC42-202ENST00000344548 PTCH2Q9Y6C5 1203 aa14.43□□□□□ -0.1
CDC42-202ENST00000344548 ZSCAN5CA6NGD5 496 aaPredicted RBP14.43□□□□□ -0.1
CDC42-202ENST00000344548 M0QZ92 97 aa14.43□□□□□ -0.1
CDC42-202ENST00000344548 PIRO00625 290 aa14.43□□□□□ -0.1
CDC42-202ENST00000344548 STAU1O95793 577 aaKnown RBP14.43□□□□□ -0.1
CDC42-202ENST00000344548 IBSPP21815 317 aaPredicted RBP14.43□□□□□ -0.1
CDC42-202ENST00000344548 YY1P25490 414 aa14.43□□□□□ -0.1
CDC42-202ENST00000344548 ITIH3Q06033 890 aa14.43□□□□□ -0.1
CDC42-202ENST00000344548 INCA1Q0VD86 236 aa14.43□□□□□ -0.1
CDC42-202ENST00000344548 SOWAHAQ2M3V2 549 aa14.43□□□□□ -0.1
CDC42-202ENST00000344548 PLEKHA7Q6IQ23 1121 aa14.43□□□□□ -0.1
CDC42-202ENST00000344548 ADAT2Q7Z6V5 191 aaKnown RBP14.43□□□□□ -0.1
CDC42-202ENST00000344548 RNF180Q86T96 592 aa14.43□□□□□ -0.1
CDC42-202ENST00000344548 PCSK9Q8NBP7 692 aaKnown RBP14.43□□□□□ -0.1
CDC42-202ENST00000344548 ZBTB9Q96C00 473 aa14.43□□□□□ -0.1
CDC42-202ENST00000344548 PBKQ96KB5 322 aa14.43□□□□□ -0.1
CDC42-202ENST00000344548 RPGRIP1Q96KN7 1286 aa14.43□□□□□ -0.1
CDC42-202ENST00000344548 FAM105AQ9NUU6 356 aa14.43□□□□□ -0.1
CDC42-202ENST00000344548 BARX2Q9UMQ3 279 aaPredicted RBP14.43□□□□□ -0.1
CDC42-202ENST00000344548 FGFR1P11362 822 aa14.42□□□□□ -0.1
CDC42-202ENST00000344548 KCNE1P15382 129 aa14.42□□□□□ -0.1
CDC42-202ENST00000344548 CDH5P33151 784 aaPredicted RBP14.42□□□□□ -0.1
CDC42-202ENST00000344548 MLH1P40692 756 aa14.42□□□□□ -0.1
CDC42-202ENST00000344548 TNNC1P63316 161 aa14.42□□□□□ -0.1
CDC42-202ENST00000344548 LPIN1Q14693 890 aa14.42□□□□□ -0.1
CDC42-202ENST00000344548 FBXO47Q5MNV8 452 aa14.42□□□□□ -0.1
CDC42-202ENST00000344548 RPAINQ86UA6 219 aa14.42□□□□□ -0.1
CDC42-202ENST00000344548 GSPT2Q8IYD1 628 aaKnown RBP14.42□□□□□ -0.1
CDC42-202ENST00000344548 BEST2Q8NFU1 509 aa14.42□□□□□ -0.1
CDC42-202ENST00000344548 UBA3Q8TBC4 463 aa14.42□□□□□ -0.1
CDC42-202ENST00000344548 ACTRT1Q8TDG2 376 aa14.42□□□□□ -0.1
CDC42-202ENST00000344548 CYP3A43Q9HB55 503 aa14.42□□□□□ -0.1
CDC42-202ENST00000344548 UBQLN1Q9UMX0 589 aaKnown RBP14.42□□□□□ -0.1
CDC42-202ENST00000344548 CES2O00748 559 aa14.41□□□□□ -0.1
CDC42-202ENST00000344548 FKTNO75072 461 aa14.41□□□□□ -0.1
CDC42-202ENST00000344548 MICAL2O94851 1124 aa14.41□□□□□ -0.1
CDC42-202ENST00000344548 PYGMP11217 842 aa14.41□□□□□ -0.1
CDC42-202ENST00000344548 TCF4P15884 667 aa14.41□□□□□ -0.1
CDC42-202ENST00000344548 OGDHQ02218 1023 aa14.41□□□□□ -0.1
CDC42-202ENST00000344548 ZNF252P-AS1Q0IIN9 211 aa14.41□□□□□ -0.1
CDC42-202ENST00000344548 TRADDQ15628 312 aa14.41□□□□□ -0.1
CDC42-202ENST00000344548 CCDC142Q17RM4 750 aa14.41□□□□□ -0.1
CDC42-202ENST00000344548 CC2D1AQ6P1N0 951 aaPredicted RBP14.41□□□□□ -0.1
CDC42-202ENST00000344548 APBB1IPQ7Z5R6 666 aaPredicted RBP14.41□□□□□ -0.1
CDC42-202ENST00000344548 RSPH3Q86UC2 560 aa14.41□□□□□ -0.1
CDC42-202ENST00000344548 HEXIM2Q96MH2 286 aaKnown RBP14.41□□□□□ -0.1
CDC42-202ENST00000344548 RPS6KC1Q96S38 1066 aa14.41□□□□□ -0.1
CDC42-202ENST00000344548 CPXM1Q96SM3 734 aa14.41□□□□□ -0.1
CDC42-202ENST00000344548 GAD1Q99259 594 aa14.41□□□□□ -0.1
CDC42-202ENST00000344548 KRT12Q99456 494 aa14.41□□□□□ -0.1
CDC42-202ENST00000344548 DPEP3Q9H4B8 488 aa14.41□□□□□ -0.1
CDC42-202ENST00000344548 ERVK-5Q9HDB9 667 aa14.41□□□□□ -0.1
CDC42-202ENST00000344548 TCRBV7S2A1N4TA0A589 114 aa14.41□□□□□ -0.1
CDC42-202ENST00000344548 SASH3O75995 380 aa14.41□□□□□ -0.1
CDC42-202ENST00000344548 ZRANB2O95218 330 aaKnown RBP eCLIP14.41□□□□□ -0.1
CDC42-202ENST00000344548 FGGP02679 453 aa14.41□□□□□ -0.1
CDC42-202ENST00000344548 PAEPP09466 180 aa14.41□□□□□ -0.1
CDC42-202ENST00000344548 LMO2P25791 158 aa14.41□□□□□ -0.1
CDC42-202ENST00000344548 GRK4P32298 578 aa14.41□□□□□ -0.1
CDC42-202ENST00000344548 C1QBPQ07021 282 aaKnown RBP14.41□□□□□ -0.1
CDC42-202ENST00000344548 MBTPS1Q14703 1052 aa14.41□□□□□ -0.1
CDC42-202ENST00000344548 AGMOQ6ZNB7 445 aa14.41□□□□□ -0.1
CDC42-202ENST00000344548 ACOT1Q86TX2 421 aa14.41□□□□□ -0.1
CDC42-202ENST00000344548 KLHL7Q8IXQ5 586 aa14.41□□□□□ -0.1
CDC42-202ENST00000344548 TMEM35BQ8NCS4 154 aa14.41□□□□□ -0.1
CDC42-202ENST00000344548 KBTBD7Q8WVZ9 684 aa14.41□□□□□ -0.1
CDC42-202ENST00000344548 FAXDC2Q96IV6 333 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms