RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 CCDC121Q6ZUS5 278 aa15.76■□□□□ 0.11
VIPAS39-202ENST00000343765 SYDE1Q6ZW31 735 aaPredicted RBP15.76■□□□□ 0.11
VIPAS39-202ENST00000343765 EXOC3L1Q86VI1 746 aa15.76■□□□□ 0.11
VIPAS39-202ENST00000343765 TAX1BP1Q86VP1 789 aa15.76■□□□□ 0.11
VIPAS39-202ENST00000343765 DHX37Q8IY37 1157 aaKnown RBP15.76■□□□□ 0.11
VIPAS39-202ENST00000343765 UBR7Q8N806 425 aa15.76■□□□□ 0.11
VIPAS39-202ENST00000343765 FHDC1Q9C0D6 1143 aaPredicted RBP15.76■□□□□ 0.11
VIPAS39-202ENST00000343765 CPSF3Q9UKF6 684 aaKnown RBP15.76■□□□□ 0.11
VIPAS39-202ENST00000343765 DNPEPQ9ULA0 475 aa15.76■□□□□ 0.11
VIPAS39-202ENST00000343765 TTC4O95801 387 aa15.76■□□□□ 0.11
VIPAS39-202ENST00000343765 HOXC6P09630 235 aa15.76■□□□□ 0.11
VIPAS39-202ENST00000343765 ETS1P14921 441 aa15.76■□□□□ 0.11
VIPAS39-202ENST00000343765 ADCY1Q08828 1119 aa15.76■□□□□ 0.11
VIPAS39-202ENST00000343765 MXD4Q14582 209 aaPredicted RBP15.76■□□□□ 0.11
VIPAS39-202ENST00000343765 SGSM1Q2NKQ1 1148 aa15.76■□□□□ 0.11
VIPAS39-202ENST00000343765 P3H1Q32P28 736 aa15.76■□□□□ 0.11
VIPAS39-202ENST00000343765 HP1BP3Q5SSJ5 553 aaPredicted RBP15.76■□□□□ 0.11
VIPAS39-202ENST00000343765 CELF3Q5SZQ8 465 aaKnown RBP15.76■□□□□ 0.11
VIPAS39-202ENST00000343765 CDCA2Q69YH5 1023 aaPredicted RBP15.76■□□□□ 0.11
VIPAS39-202ENST00000343765 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.76■□□□□ 0.11
VIPAS39-202ENST00000343765 TMEM35BQ8NCS4 154 aa15.76■□□□□ 0.11
VIPAS39-202ENST00000343765 TCP11Q8WWU5 503 aa15.76■□□□□ 0.11
VIPAS39-202ENST00000343765 KCNN1Q92952 543 aa15.76■□□□□ 0.11
VIPAS39-202ENST00000343765 DCPSQ96C86 337 aaKnown RBP15.76■□□□□ 0.11
VIPAS39-202ENST00000343765 SLITRK1Q96PX8 696 aa15.76■□□□□ 0.11
VIPAS39-202ENST00000343765 JPH2Q9BR39 696 aaPredicted RBP15.76■□□□□ 0.11
VIPAS39-202ENST00000343765 TMEM109Q9BVC6 243 aa15.76■□□□□ 0.11
VIPAS39-202ENST00000343765 STMN4Q9H169 189 aaPredicted RBP15.76■□□□□ 0.11
VIPAS39-202ENST00000343765 NINJ2Q9NZG7 142 aa15.76■□□□□ 0.11
VIPAS39-202ENST00000343765 TJP2Q9UDY2 1190 aa15.76■□□□□ 0.11
VIPAS39-202ENST00000343765 ZNF148Q9UQR1 794 aa15.76■□□□□ 0.11
VIPAS39-202ENST00000343765 SIP14410 1827 aa15.76■□□□□ 0.11
VIPAS39-202ENST00000343765 GOLGA6L7A0A1B0GV03 622 aa15.75■□□□□ 0.11
VIPAS39-202ENST00000343765 SOCS7O14512 581 aa15.75■□□□□ 0.11
VIPAS39-202ENST00000343765 CALB1P05937 261 aa15.75■□□□□ 0.11
VIPAS39-202ENST00000343765 VIMP08670 466 aaKnown RBP15.75■□□□□ 0.11
VIPAS39-202ENST00000343765 CXCL8P10145 99 aa15.75■□□□□ 0.11
VIPAS39-202ENST00000343765 MCL1Q07820 350 aa15.75■□□□□ 0.11
VIPAS39-202ENST00000343765 SPRED3Q2MJR0 410 aa15.75■□□□□ 0.11
VIPAS39-202ENST00000343765 ATF7IP2Q5U623 682 aa15.75■□□□□ 0.11
VIPAS39-202ENST00000343765 CYP4F22Q6NT55 531 aa15.75■□□□□ 0.11
VIPAS39-202ENST00000343765 C6orf89Q6UWU4 347 aa15.75■□□□□ 0.11
VIPAS39-202ENST00000343765 WDTC1Q8N5D0 677 aa15.75■□□□□ 0.11
VIPAS39-202ENST00000343765 ANKRD42Q8N9B4 389 aa15.75■□□□□ 0.11
VIPAS39-202ENST00000343765 ARHGEF2Q92974 986 aaKnown RBP15.75■□□□□ 0.11
VIPAS39-202ENST00000343765 FGD4Q96M96 766 aa15.75■□□□□ 0.11
VIPAS39-202ENST00000343765 ATXN2Q99700 1313 aaKnown RBP15.75■□□□□ 0.11
VIPAS39-202ENST00000343765 ABLIM1O14639 778 aa15.75■□□□□ 0.11
VIPAS39-202ENST00000343765 CETN2P41208 172 aa15.75■□□□□ 0.11
VIPAS39-202ENST00000343765 CDH8P55286 799 aa15.75■□□□□ 0.11
VIPAS39-202ENST00000343765 SMTNL2Q2TAL5 461 aa15.75■□□□□ 0.11
VIPAS39-202ENST00000343765 DENND1BQ6P3S1 775 aa15.75■□□□□ 0.11
VIPAS39-202ENST00000343765 TAOK1Q7L7X3 1001 aa15.75■□□□□ 0.11
VIPAS39-202ENST00000343765 CROCCP2Q86T23 111 aa15.75■□□□□ 0.11
VIPAS39-202ENST00000343765 ERICH1Q86X53 443 aa15.75■□□□□ 0.11
VIPAS39-202ENST00000343765 LRRC34Q8IZ02 419 aa15.75■□□□□ 0.11
VIPAS39-202ENST00000343765 CCDC89Q8N998 374 aa15.75■□□□□ 0.11
VIPAS39-202ENST00000343765 DYDC1Q8WWB3 177 aa15.75■□□□□ 0.11
VIPAS39-202ENST00000343765 MAF1Q9H063 256 aa15.75■□□□□ 0.11
VIPAS39-202ENST00000343765 MINDY3Q9H8M7 445 aa15.75■□□□□ 0.11
VIPAS39-202ENST00000343765 KCNK9Q9NPC2 374 aa15.75■□□□□ 0.11
VIPAS39-202ENST00000343765 PDGFCQ9NRA1 345 aa15.75■□□□□ 0.11
VIPAS39-202ENST00000343765 HOMER3Q9NSC5 361 aa15.75■□□□□ 0.11
VIPAS39-202ENST00000343765 NEU2Q9Y3R4 380 aa15.75■□□□□ 0.11
VIPAS39-202ENST00000343765 LOC285556D6RIA3 1793 aa15.75■□□□□ 0.11
VIPAS39-202ENST00000343765 LRRD1A4D1F6 860 aa15.75■□□□□ 0.11
VIPAS39-202ENST00000343765 CPP00450 1065 aa15.75■□□□□ 0.11
VIPAS39-202ENST00000343765 ASPAP45381 313 aa15.75■□□□□ 0.11
VIPAS39-202ENST00000343765 AP3M2P53677 418 aa15.75■□□□□ 0.11
VIPAS39-202ENST00000343765 DYNLT1P63172 113 aa15.75■□□□□ 0.11
VIPAS39-202ENST00000343765 LACTBP83111 547 aaPredicted RBP15.75■□□□□ 0.11
VIPAS39-202ENST00000343765 GJC2Q5T442 439 aaPredicted RBP15.75■□□□□ 0.11
VIPAS39-202ENST00000343765 MPZL3Q6UWV2 235 aa15.75■□□□□ 0.11
VIPAS39-202ENST00000343765 CENPTQ96BT3 561 aa15.75■□□□□ 0.11
VIPAS39-202ENST00000343765 ZNF317Q96PQ6 595 aaPredicted RBP15.75■□□□□ 0.11
VIPAS39-202ENST00000343765 SGIP1Q9BQI5 828 aa15.75■□□□□ 0.11
VIPAS39-202ENST00000343765 A0A0G2JLL6 359 aaPredicted RBP15.74■□□□□ 0.11
VIPAS39-202ENST00000343765 C5orf60A6NFR6 353 aa15.74■□□□□ 0.11
VIPAS39-202ENST00000343765 TNNC2P02585 160 aa15.74■□□□□ 0.11
VIPAS39-202ENST00000343765 MFSD5Q6N075 450 aa15.74■□□□□ 0.11
VIPAS39-202ENST00000343765 EFCAB12Q6NXP0 572 aa15.74■□□□□ 0.11
VIPAS39-202ENST00000343765 PRRT2Q7Z6L0 340 aaPredicted RBP15.74■□□□□ 0.11
VIPAS39-202ENST00000343765 RBM41Q96IZ5 413 aaKnown RBP15.74■□□□□ 0.11
VIPAS39-202ENST00000343765 MMP19Q99542 508 aa15.74■□□□□ 0.11
VIPAS39-202ENST00000343765 CEP83Q9Y592 693 aa15.74■□□□□ 0.11
VIPAS39-202ENST00000343765 LIASO43766 372 aa15.74■□□□□ 0.11
VIPAS39-202ENST00000343765 ECM2O94769 699 aaPredicted RBP15.74■□□□□ 0.11
VIPAS39-202ENST00000343765 PLCB3Q01970 1234 aa15.74■□□□□ 0.11
VIPAS39-202ENST00000343765 SLC20A2Q08357 652 aa15.74■□□□□ 0.11
VIPAS39-202ENST00000343765 KCTD2Q14681 263 aa15.74■□□□□ 0.11
VIPAS39-202ENST00000343765 CNGA2Q16280 664 aa15.74■□□□□ 0.11
VIPAS39-202ENST00000343765 CAPN12Q6ZSI9 719 aa15.74■□□□□ 0.11
VIPAS39-202ENST00000343765 YTHDF3Q7Z739 585 aaKnown RBP15.74■□□□□ 0.11
VIPAS39-202ENST00000343765 RCOR2Q8IZ40 523 aa15.74■□□□□ 0.11
VIPAS39-202ENST00000343765 C3orf20Q8ND61 904 aa15.74■□□□□ 0.11
VIPAS39-202ENST00000343765 ANKRD36BP1Q96IX9 119 aa15.74■□□□□ 0.11
VIPAS39-202ENST00000343765 OSBPL7Q9BZF2 842 aa15.74■□□□□ 0.11
VIPAS39-202ENST00000343765 ROPN1BQ9BZX4 212 aaPredicted RBP15.74■□□□□ 0.11
VIPAS39-202ENST00000343765 XYLT2Q9H1B5 865 aa15.74■□□□□ 0.11
VIPAS39-202ENST00000343765 ZWILCHQ9H900 591 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms