RNA–Protein interactions for RNA: ENST00000343060.4

HOXA1-201, Transcript of homeobox A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-201ENST00000343060 OPTNQ96CV9 577 aa10.19□□□□□ -0.78
HOXA1-201ENST00000343060 OLFM3Q96PB7 478 aa10.19□□□□□ -0.78
HOXA1-201ENST00000343060 ECSITQ9BQ95 431 aa10.19□□□□□ -0.78
HOXA1-201ENST00000343060 TSSK1BQ9BXA7 367 aa10.19□□□□□ -0.78
HOXA1-201ENST00000343060 TMEM120AQ9BXJ8 343 aa10.19□□□□□ -0.78
HOXA1-201ENST00000343060 HEMGNQ9BXL5 484 aa10.19□□□□□ -0.78
HOXA1-201ENST00000343060 FHDC1Q9C0D6 1143 aaPredicted RBP10.19□□□□□ -0.78
HOXA1-201ENST00000343060 RANBP17Q9H2T7 1088 aaKnown RBP10.19□□□□□ -0.78
HOXA1-201ENST00000343060 MANSC1Q9H8J5 431 aa10.19□□□□□ -0.78
HOXA1-201ENST00000343060 VPS37BQ9H9H4 285 aa10.19□□□□□ -0.78
HOXA1-201ENST00000343060 ATXN10Q9UBB4 475 aa10.19□□□□□ -0.78
HOXA1-201ENST00000343060 RABGEF1Q9UJ41 708 aa10.19□□□□□ -0.78
HOXA1-201ENST00000343060 PLA2G4CQ9UP65 541 aa10.19□□□□□ -0.78
HOXA1-201ENST00000343060 SUGT1Q9Y2Z0 365 aa10.19□□□□□ -0.78
HOXA1-201ENST00000343060 CLUHO75153 1309 aa10.19□□□□□ -0.78
HOXA1-201ENST00000343060 CREB3O43889 395 aa10.18□□□□□ -0.78
HOXA1-201ENST00000343060 UFL1O94874 794 aa10.18□□□□□ -0.78
HOXA1-201ENST00000343060 ANPEPP15144 967 aa10.18□□□□□ -0.78
HOXA1-201ENST00000343060 AMPD1P23109 780 aa10.18□□□□□ -0.78
HOXA1-201ENST00000343060 PIK3CAP42336 1068 aa10.18□□□□□ -0.78
HOXA1-201ENST00000343060 RTP1P59025 263 aa10.18□□□□□ -0.78
HOXA1-201ENST00000343060 TAS2R40P59535 323 aa10.18□□□□□ -0.78
HOXA1-201ENST00000343060 MCL1Q07820 350 aa10.18□□□□□ -0.78
HOXA1-201ENST00000343060 OVGP1Q12889 678 aa10.18□□□□□ -0.78
HOXA1-201ENST00000343060 PRKD1Q15139 912 aaPredicted RBP10.18□□□□□ -0.78
HOXA1-201ENST00000343060 RC3H1Q5TC82 1133 aaKnown RBP10.18□□□□□ -0.78
HOXA1-201ENST00000343060 CENPUQ71F23 418 aa10.18□□□□□ -0.78
HOXA1-201ENST00000343060 MON1BQ7L1V2 547 aa10.18□□□□□ -0.78
HOXA1-201ENST00000343060 ZNF677Q86XU0 584 aa10.18□□□□□ -0.78
HOXA1-201ENST00000343060 PDCD7Q8N8D1 485 aaKnown RBP10.18□□□□□ -0.78
HOXA1-201ENST00000343060 TCP10LQ8TDR4 215 aa10.18□□□□□ -0.78
HOXA1-201ENST00000343060 NT5C1BQ96P26 610 aa10.18□□□□□ -0.78
HOXA1-201ENST00000343060 TUBGCP5Q96RT8 1024 aa10.18□□□□□ -0.78
HOXA1-201ENST00000343060 CENPKQ9BS16 269 aa10.18□□□□□ -0.78
HOXA1-201ENST00000343060 TMEM8AQ9HCN3 771 aa10.18□□□□□ -0.78
HOXA1-201ENST00000343060 FBXO6Q9NRD1 293 aaPredicted RBP10.18□□□□□ -0.78
HOXA1-201ENST00000343060 DRG1Q9Y295 367 aaKnown RBP10.18□□□□□ -0.78
HOXA1-201ENST00000343060 A0A0G2JND7 137 aa10.18□□□□□ -0.78
HOXA1-201ENST00000343060 CAPN14A8MX76 684 aa10.18□□□□□ -0.78
HOXA1-201ENST00000343060 PABPC4LP0CB38 370 aaKnown RBP10.18□□□□□ -0.78
HOXA1-201ENST00000343060 UBTFL6P0CB48 400 aaPredicted RBP10.18□□□□□ -0.78
HOXA1-201ENST00000343060 ESRRAP11474 423 aaPredicted RBP10.18□□□□□ -0.78
HOXA1-201ENST00000343060 ZNF76P36508 570 aa10.18□□□□□ -0.78
HOXA1-201ENST00000343060 PGM1P36871 562 aa10.18□□□□□ -0.78
HOXA1-201ENST00000343060 ETV4P43268 484 aa10.18□□□□□ -0.78
HOXA1-201ENST00000343060 KRT39Q6A163 491 aa10.18□□□□□ -0.78
HOXA1-201ENST00000343060 DPY19L2Q6NUT2 758 aa10.18□□□□□ -0.78
HOXA1-201ENST00000343060 IZUMO2Q6UXV1 221 aa10.18□□□□□ -0.78
HOXA1-201ENST00000343060 ACAD11Q709F0 780 aa10.18□□□□□ -0.78
HOXA1-201ENST00000343060 SCYL3Q8IZE3 742 aa10.18□□□□□ -0.78
HOXA1-201ENST00000343060 ZSWIM2Q8NEG5 633 aa10.18□□□□□ -0.78
HOXA1-201ENST00000343060 PPP2R3CQ969Q6 453 aa10.18□□□□□ -0.78
HOXA1-201ENST00000343060 FAM118BQ9BPY3 351 aa10.18□□□□□ -0.78
HOXA1-201ENST00000343060 WDR11Q9BZH6 1224 aa10.18□□□□□ -0.78
HOXA1-201ENST00000343060 ZCWPW1Q9H0M4 648 aa10.18□□□□□ -0.78
HOXA1-201ENST00000343060 ACSS3Q9H6R3 686 aa10.18□□□□□ -0.78
HOXA1-201ENST00000343060 C17orf75Q9HAS0 396 aa10.18□□□□□ -0.78
HOXA1-201ENST00000343060 LMCD1Q9NZU5 365 aa10.18□□□□□ -0.78
HOXA1-201ENST00000343060 LRRC37AA6NMS7 1700 aa10.18□□□□□ -0.78
HOXA1-201ENST00000343060 SLX4Q8IY92 1834 aa10.18□□□□□ -0.78
HOXA1-201ENST00000343060 ARHGEF35A5YM69 484 aa10.17□□□□□ -0.78
HOXA1-201ENST00000343060 FCHO1O14526 889 aa10.17□□□□□ -0.78
HOXA1-201ENST00000343060 KLF11O14901 512 aa10.17□□□□□ -0.78
HOXA1-201ENST00000343060 RPS6KA4O75676 772 aa10.17□□□□□ -0.78
HOXA1-201ENST00000343060 EEF2P13639 858 aaKnown RBP10.17□□□□□ -0.78
HOXA1-201ENST00000343060 PTPN7P35236 360 aa10.17□□□□□ -0.78
HOXA1-201ENST00000343060 ACTR3P61158 418 aa10.17□□□□□ -0.78
HOXA1-201ENST00000343060 GTF2BQ00403 316 aa10.17□□□□□ -0.78
HOXA1-201ENST00000343060 CDC16Q13042 620 aa10.17□□□□□ -0.78
HOXA1-201ENST00000343060 OASLQ15646 514 aaKnown RBP10.17□□□□□ -0.78
HOXA1-201ENST00000343060 KLHL38Q2WGJ6 581 aa10.17□□□□□ -0.78
HOXA1-201ENST00000343060 TMCO4Q5TGY1 634 aa10.17□□□□□ -0.78
HOXA1-201ENST00000343060 FAM43BQ6ZT52 329 aaPredicted RBP10.17□□□□□ -0.78
HOXA1-201ENST00000343060 MARK2Q7KZI7 788 aaKnown RBP10.17□□□□□ -0.78
HOXA1-201ENST00000343060 ENOSF1Q7L5Y1 443 aa10.17□□□□□ -0.78
HOXA1-201ENST00000343060 GSTA5Q7RTV2 222 aa10.17□□□□□ -0.78
HOXA1-201ENST00000343060 TMPRSS6Q8IU80 811 aa10.17□□□□□ -0.78
HOXA1-201ENST00000343060 CCDC110Q8TBZ0 833 aa10.17□□□□□ -0.78
HOXA1-201ENST00000343060 DCAKDQ8WVC6 231 aa10.17□□□□□ -0.78
HOXA1-201ENST00000343060 OXNAD1Q96HP4 312 aaPredicted RBP10.17□□□□□ -0.78
HOXA1-201ENST00000343060 GMCL1Q96IK5 515 aa10.17□□□□□ -0.78
HOXA1-201ENST00000343060 EPB41L1Q9H4G0 881 aa10.17□□□□□ -0.78
HOXA1-201ENST00000343060 PCDH9Q9HC56 1237 aa10.17□□□□□ -0.78
HOXA1-201ENST00000343060 CNTN3Q9P232 1028 aa10.17□□□□□ -0.78
HOXA1-201ENST00000343060 SLC17A7Q9P2U7 560 aa10.17□□□□□ -0.78
HOXA1-201ENST00000343060 DNPEPQ9ULA0 475 aa10.17□□□□□ -0.78
HOXA1-201ENST00000343060 FARP1Q9Y4F1 1045 aaPredicted RBP10.17□□□□□ -0.78
HOXA1-201ENST00000343060 DENND3A2RUS2 1198 aa10.17□□□□□ -0.78
HOXA1-201ENST00000343060 E7ESA3 106 aa10.17□□□□□ -0.78
HOXA1-201ENST00000343060 ATP2A1O14983 1001 aa10.17□□□□□ -0.78
HOXA1-201ENST00000343060 CHMP2AO43633 222 aa10.17□□□□□ -0.78
HOXA1-201ENST00000343060 BUD23O43709 281 aaKnown RBP10.17□□□□□ -0.78
HOXA1-201ENST00000343060 HLA-DOAP06340 250 aa10.17□□□□□ -0.78
HOXA1-201ENST00000343060 TSHRP16473 764 aa10.17□□□□□ -0.78
HOXA1-201ENST00000343060 GLRA2P23416 452 aa10.17□□□□□ -0.78
HOXA1-201ENST00000343060 GTF2H1P32780 548 aa10.17□□□□□ -0.78
HOXA1-201ENST00000343060 ARSEP51690 589 aa10.17□□□□□ -0.78
HOXA1-201ENST00000343060 GCNT1Q02742 428 aa10.17□□□□□ -0.78
HOXA1-201ENST00000343060 CDK18Q07002 472 aa10.17□□□□□ -0.78
HOXA1-201ENST00000343060 ENPEPQ07075 957 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms