RNA–Protein interactions for RNA: ENST00000342887.1

CFAP54-201, Transcript of cilia and flagella associated protein 54, humanhuman

TSL 2

Gene CFAP54, Length 3,686 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54-201ENST00000342887 DDX23Q9BUQ8 820 aaKnown RBP8.6□□□□□ -1.03
CFAP54-201ENST00000342887 MYLK2Q9H1R3 596 aa8.6□□□□□ -1.03
CFAP54-201ENST00000342887 LDHAP00338 332 aaKnown RBP8.6□□□□□ -1.03
CFAP54-201ENST00000342887 SSBP05455 408 aaKnown RBP eCLIP8.6□□□□□ -1.03
CFAP54-201ENST00000342887 T-ENOLP0DO92 83 aa8.6□□□□□ -1.03
CFAP54-201ENST00000342887 TAC1P20366 129 aa8.6□□□□□ -1.03
CFAP54-201ENST00000342887 SCNN1AP37088 669 aa8.6□□□□□ -1.03
CFAP54-201ENST00000342887 NEK3P51956 506 aa8.6□□□□□ -1.03
CFAP54-201ENST00000342887 NKX3-2P78367 333 aa8.6□□□□□ -1.03
CFAP54-201ENST00000342887 TAP1Q03518 808 aa8.6□□□□□ -1.03
CFAP54-201ENST00000342887 SLC18A2Q05940 514 aa8.6□□□□□ -1.03
CFAP54-201ENST00000342887 FRG1Q14331 258 aaKnown RBP8.6□□□□□ -1.03
CFAP54-201ENST00000342887 KCNJ11Q14654 390 aa8.6□□□□□ -1.03
CFAP54-201ENST00000342887 ARMC3Q5W041 872 aa8.6□□□□□ -1.03
CFAP54-201ENST00000342887 SLFN12LQ6IEE8 588 aa8.6□□□□□ -1.03
CFAP54-201ENST00000342887 ZNF534Q76KX8 674 aa8.6□□□□□ -1.03
CFAP54-201ENST00000342887 C7orf31Q8N865 590 aa8.6□□□□□ -1.03
CFAP54-201ENST00000342887 ATL2Q8NHH9 583 aa8.6□□□□□ -1.03
CFAP54-201ENST00000342887 MAIP1Q8WWC4 291 aa8.6□□□□□ -1.03
CFAP54-201ENST00000342887 TEX13BQ9BXU2 312 aa8.6□□□□□ -1.03
CFAP54-201ENST00000342887 POLR3FQ9H1D9 316 aaPredicted RBP8.6□□□□□ -1.03
CFAP54-201ENST00000342887 ACAD9Q9H845 621 aa8.6□□□□□ -1.03
CFAP54-201ENST00000342887 KMT5AQ9NQR1 393 aa8.6□□□□□ -1.03
CFAP54-201ENST00000342887 GABBR1Q9UBS5 961 aa8.6□□□□□ -1.03
CFAP54-201ENST00000342887 RPS6KL1Q9Y6S9 549 aa8.6□□□□□ -1.03
CFAP54-201ENST00000342887 KRT13P13646 458 aa8.6□□□□□ -1.03
CFAP54-201ENST00000342887 CREB1P16220 341 aa8.6□□□□□ -1.03
CFAP54-201ENST00000342887 PDE6CP51160 858 aa8.6□□□□□ -1.03
CFAP54-201ENST00000342887 TNIP1Q15025 636 aa8.6□□□□□ -1.03
CFAP54-201ENST00000342887 TXNRD3NBQ6F5E7 133 aa8.6□□□□□ -1.03
CFAP54-201ENST00000342887 ADGRD1Q6QNK2 874 aa8.6□□□□□ -1.03
CFAP54-201ENST00000342887 OTUD6AQ7L8S5 288 aa8.6□□□□□ -1.03
CFAP54-201ENST00000342887 APOBEC3FQ8IUX4 373 aaKnown RBP8.6□□□□□ -1.03
CFAP54-201ENST00000342887 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.6□□□□□ -1.03
CFAP54-201ENST00000342887 SLC4A11Q8NBS3 891 aa8.6□□□□□ -1.03
CFAP54-201ENST00000342887 MIEF2Q96C03 454 aa8.6□□□□□ -1.03
CFAP54-201ENST00000342887 SAAL1Q96ER3 474 aa8.6□□□□□ -1.03
CFAP54-201ENST00000342887 MCM8Q9UJA3 840 aa8.6□□□□□ -1.03
CFAP54-201ENST00000342887 CCT8L1PA6NM43 557 aa8.59□□□□□ -1.03
CFAP54-201ENST00000342887 SIGLEC16A6NMB1 481 aa8.59□□□□□ -1.03
CFAP54-201ENST00000342887 CCDC169A6NNP5 214 aa8.59□□□□□ -1.03
CFAP54-201ENST00000342887 PES1O00541 588 aaKnown RBP8.59□□□□□ -1.03
CFAP54-201ENST00000342887 KLF11O14901 512 aa8.59□□□□□ -1.03
CFAP54-201ENST00000342887 FOXN2P32314 431 aa8.59□□□□□ -1.03
CFAP54-201ENST00000342887 YARSP54577 528 aaKnown RBP8.59□□□□□ -1.03
CFAP54-201ENST00000342887 BPIFB4P59827 614 aa8.59□□□□□ -1.03
CFAP54-201ENST00000342887 NCALDP61601 193 aa8.59□□□□□ -1.03
CFAP54-201ENST00000342887 KRT17Q04695 432 aa8.59□□□□□ -1.03
CFAP54-201ENST00000342887 MKRN3Q13064 507 aaKnown RBP8.59□□□□□ -1.03
CFAP54-201ENST00000342887 SKIDA1Q1XH10 827 aa8.59□□□□□ -1.03
CFAP54-201ENST00000342887 MIS18BP1Q6P0N0 1132 aa8.59□□□□□ -1.03
CFAP54-201ENST00000342887 DCAKDQ8WVC6 231 aa8.59□□□□□ -1.03
CFAP54-201ENST00000342887 IFT81Q8WYA0 676 aa8.59□□□□□ -1.03
CFAP54-201ENST00000342887 MAGEB18Q96M61 343 aa8.59□□□□□ -1.03
CFAP54-201ENST00000342887 RABGEF1Q9UJ41 708 aa8.59□□□□□ -1.03
CFAP54-201ENST00000342887 GJD2Q9UKL4 321 aa8.59□□□□□ -1.03
CFAP54-201ENST00000342887 POLIQ9UNA4 740 aa8.59□□□□□ -1.03
CFAP54-201ENST00000342887 SHOC2Q9UQ13 582 aa8.59□□□□□ -1.03
CFAP54-201ENST00000342887 SLC45A1Q9Y2W3 748 aa8.59□□□□□ -1.03
CFAP54-201ENST00000342887 STARD13Q9Y3M8 1113 aa8.59□□□□□ -1.03
CFAP54-201ENST00000342887 TDRD15B5MCY1 1934 aaKnown RBP8.59□□□□□ -1.03
CFAP54-201ENST00000342887 C22orf31O95567 290 aa8.59□□□□□ -1.03
CFAP54-201ENST00000342887 PIM1P11309 404 aaPredicted RBP8.59□□□□□ -1.03
CFAP54-201ENST00000342887 IL1R2P27930 398 aa8.59□□□□□ -1.03
CFAP54-201ENST00000342887 MAGEA12P43365 314 aa8.59□□□□□ -1.03
CFAP54-201ENST00000342887 RAD23BP54727 409 aa8.59□□□□□ -1.03
CFAP54-201ENST00000342887 MORF4L2Q15014 288 aa8.59□□□□□ -1.03
CFAP54-201ENST00000342887 MTFR1Q15390 333 aa8.59□□□□□ -1.03
CFAP54-201ENST00000342887 LLGL2Q6P1M3 1020 aa8.59□□□□□ -1.03
CFAP54-201ENST00000342887 NLRX1Q86UT6 975 aa8.59□□□□□ -1.03
CFAP54-201ENST00000342887 XYLT1Q86Y38 959 aa8.59□□□□□ -1.03
CFAP54-201ENST00000342887 NIM1KQ8IY84 436 aa8.59□□□□□ -1.03
CFAP54-201ENST00000342887 FEZF2Q8TBJ5 459 aa8.59□□□□□ -1.03
CFAP54-201ENST00000342887 ZNF606Q8WXB4 792 aa8.59□□□□□ -1.03
CFAP54-201ENST00000342887 NT5C3BQ969T7 300 aa8.59□□□□□ -1.03
CFAP54-201ENST00000342887 HAUS2Q9NVX0 235 aa8.59□□□□□ -1.03
CFAP54-201ENST00000342887 GPRC5DQ9NZD1 345 aa8.59□□□□□ -1.03
CFAP54-201ENST00000342887 LNPEPQ9UIQ6 1025 aa8.59□□□□□ -1.03
CFAP54-201ENST00000342887 NOVA2Q9UNW9 492 aaKnown RBP8.59□□□□□ -1.03
CFAP54-201ENST00000342887 PASKQ96RG2 1323 aa8.59□□□□□ -1.03
CFAP54-201ENST00000342887 EBAG9O00559 213 aa8.59□□□□□ -1.03
CFAP54-201ENST00000342887 CLDN3O15551 220 aa8.59□□□□□ -1.03
CFAP54-201ENST00000342887 DNAJC6O75061 913 aa8.59□□□□□ -1.03
CFAP54-201ENST00000342887 GNAZP19086 355 aa8.59□□□□□ -1.03
CFAP54-201ENST00000342887 EIF2AK2P19525 551 aaKnown RBP8.59□□□□□ -1.03
CFAP54-201ENST00000342887 MATR3P43243 847 aaKnown RBP eCLIP8.59□□□□□ -1.03
CFAP54-201ENST00000342887 MARCH8Q5T0T0 291 aa8.59□□□□□ -1.03
CFAP54-201ENST00000342887 CES4AQ5XG92 561 aa8.59□□□□□ -1.03
CFAP54-201ENST00000342887 SLC9A4Q6AI14 798 aa8.59□□□□□ -1.03
CFAP54-201ENST00000342887 BBS12Q6ZW61 710 aa8.59□□□□□ -1.03
CFAP54-201ENST00000342887 ZNF467Q7Z7K2 595 aaPredicted RBP8.59□□□□□ -1.03
CFAP54-201ENST00000342887 RCOR2Q8IZ40 523 aa8.59□□□□□ -1.03
CFAP54-201ENST00000342887 PLCD4Q9BRC7 762 aa8.59□□□□□ -1.03
CFAP54-201ENST00000342887 KCNK13Q9HB14 408 aa8.59□□□□□ -1.03
CFAP54-201ENST00000342887 USP29Q9HBJ7 922 aa8.59□□□□□ -1.03
CFAP54-201ENST00000342887 PCDH9Q9HC56 1237 aa8.59□□□□□ -1.03
CFAP54-201ENST00000342887 ARHGEF4Q9NR80 690 aa8.59□□□□□ -1.03
CFAP54-201ENST00000342887 TNFSF13BQ9Y275 285 aa8.59□□□□□ -1.03
CFAP54-201ENST00000342887 PRKCGP05129 697 aa8.58□□□□□ -1.04
CFAP54-201ENST00000342887 ZNF76P36508 570 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms