RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 PIN4Q9Y237 131 aaKnown RBP12.55□□□□□ -0.4
ATXN3-201ENST00000340660 CELSR1Q9NYQ6 3014 aa12.55□□□□□ -0.4
ATXN3-201ENST00000340660 ZBTB5O15062 677 aa12.54□□□□□ -0.4
ATXN3-201ENST00000340660 ATG7O95352 703 aa12.54□□□□□ -0.4
ATXN3-201ENST00000340660 GJA1P17302 382 aa12.54□□□□□ -0.4
ATXN3-201ENST00000340660 TMPRSS3P57727 454 aa12.54□□□□□ -0.4
ATXN3-201ENST00000340660 MTMR1Q13613 665 aa12.54□□□□□ -0.4
ATXN3-201ENST00000340660 ANO7Q6IWH7 933 aa12.54□□□□□ -0.4
ATXN3-201ENST00000340660 MRPL10Q7Z7H8 261 aaKnown RBP12.54□□□□□ -0.4
ATXN3-201ENST00000340660 MDGA1Q8NFP4 955 aa12.54□□□□□ -0.4
ATXN3-201ENST00000340660 C1orf216Q8TAB5 229 aa12.54□□□□□ -0.4
ATXN3-201ENST00000340660 RABGGTAQ92696 567 aa12.54□□□□□ -0.4
ATXN3-201ENST00000340660 TMEM176AQ96HP8 235 aa12.54□□□□□ -0.4
ATXN3-201ENST00000340660 CNOT6LQ96LI5 555 aaKnown RBP12.54□□□□□ -0.4
ATXN3-201ENST00000340660 MAP7D2Q96T17 732 aa12.54□□□□□ -0.4
ATXN3-201ENST00000340660 LRRCC1Q9C099 1032 aa12.54□□□□□ -0.4
ATXN3-201ENST00000340660 FBRSL1Q9HCM7 1045 aaKnown RBP12.54□□□□□ -0.4
ATXN3-201ENST00000340660 SEPT3Q9UH03 358 aa12.54□□□□□ -0.4
ATXN3-201ENST00000340660 ADAM28Q9UKQ2 775 aa12.54□□□□□ -0.4
ATXN3-201ENST00000340660 AK5Q9Y6K8 562 aa12.54□□□□□ -0.4
ATXN3-201ENST00000340660 TLN1Q9Y490 2541 aaKnown RBP12.53□□□□□ -0.4
ATXN3-201ENST00000340660 A6NJY4 79 aa12.53□□□□□ -0.4
ATXN3-201ENST00000340660 ZNF197O14709 1029 aa12.53□□□□□ -0.4
ATXN3-201ENST00000340660 TRIM27P14373 513 aa12.53□□□□□ -0.4
ATXN3-201ENST00000340660 TNFRSF8P28908 595 aa12.53□□□□□ -0.4
ATXN3-201ENST00000340660 P2RY2P41231 377 aa12.53□□□□□ -0.4
ATXN3-201ENST00000340660 MYO1EQ12965 1108 aa12.53□□□□□ -0.4
ATXN3-201ENST00000340660 RAB33AQ14088 237 aa12.53□□□□□ -0.4
ATXN3-201ENST00000340660 EFCAB12Q6NXP0 572 aa12.53□□□□□ -0.4
ATXN3-201ENST00000340660 RTL10Q7L3V2 364 aa12.53□□□□□ -0.4
ATXN3-201ENST00000340660 ERICH1Q86X53 443 aa12.53□□□□□ -0.4
ATXN3-201ENST00000340660 CCDC60Q8IWA6 550 aaPredicted RBP12.53□□□□□ -0.4
ATXN3-201ENST00000340660 KBTBD3Q8NAB2 608 aa12.53□□□□□ -0.4
ATXN3-201ENST00000340660 SETD7Q8WTS6 366 aaKnown RBP12.53□□□□□ -0.4
ATXN3-201ENST00000340660 SCLT1Q96NL6 688 aa12.53□□□□□ -0.4
ATXN3-201ENST00000340660 COLEC11Q9BWP8 271 aa12.53□□□□□ -0.4
ATXN3-201ENST00000340660 MIOSQ9NXC5 875 aa12.53□□□□□ -0.4
ATXN3-201ENST00000340660 UBIAD1Q9Y5Z9 338 aa12.53□□□□□ -0.4
ATXN3-201ENST00000340660 KNTC1P50748 2209 aa12.53□□□□□ -0.4
ATXN3-201ENST00000340660 SHISA8B8ZZ34 492 aa12.52□□□□□ -0.41
ATXN3-201ENST00000340660 CDK2AP1O14519 115 aa12.52□□□□□ -0.41
ATXN3-201ENST00000340660 TRDMT1O14717 391 aaKnown RBP12.52□□□□□ -0.41
ATXN3-201ENST00000340660 SYPP08247 313 aa12.52□□□□□ -0.41
ATXN3-201ENST00000340660 FGFR3P22607 806 aa12.52□□□□□ -0.41
ATXN3-201ENST00000340660 NCOA4Q13772 614 aa12.52□□□□□ -0.41
ATXN3-201ENST00000340660 DHRS13Q6UX07 377 aa12.52□□□□□ -0.41
ATXN3-201ENST00000340660 PDZD4Q76G19 769 aaPredicted RBP12.52□□□□□ -0.41
ATXN3-201ENST00000340660 STAG2Q8N3U4 1231 aa12.52□□□□□ -0.41
ATXN3-201ENST00000340660 BEND7Q8N7W2 519 aaPredicted RBP12.52□□□□□ -0.41
ATXN3-201ENST00000340660 EXD3Q8N9H8 876 aa12.52□□□□□ -0.41
ATXN3-201ENST00000340660 EZH1Q92800 747 aaPredicted RBP12.52□□□□□ -0.41
ATXN3-201ENST00000340660 E2F7Q96AV8 911 aa12.52□□□□□ -0.41
ATXN3-201ENST00000340660 LPIN3Q9BQK8 851 aa12.52□□□□□ -0.41
ATXN3-201ENST00000340660 CSRNP2Q9H175 543 aa12.52□□□□□ -0.41
ATXN3-201ENST00000340660 PLEKHB1Q9UF11 243 aaPredicted RBP12.52□□□□□ -0.41
ATXN3-201ENST00000340660 CNTNAP2Q9UHC6 1331 aa12.52□□□□□ -0.41
ATXN3-201ENST00000340660 PDZD2O15018 2839 aa12.52□□□□□ -0.41
ATXN3-201ENST00000340660 CABIN1Q9Y6J0 2220 aa12.52□□□□□ -0.41
ATXN3-201ENST00000340660 PTPRDP23468 1912 aa12.51□□□□□ -0.41
ATXN3-201ENST00000340660 ARHGEF37A1IGU5 675 aa12.51□□□□□ -0.41
ATXN3-201ENST00000340660 LZTS3O60299 673 aaPredicted RBP12.51□□□□□ -0.41
ATXN3-201ENST00000340660 PARP1P09874 1014 aaKnown RBP12.51□□□□□ -0.41
ATXN3-201ENST00000340660 OR1D2P34982 312 aa12.51□□□□□ -0.41
ATXN3-201ENST00000340660 CLDN6P56747 220 aa12.51□□□□□ -0.41
ATXN3-201ENST00000340660 CTBSQ01459 385 aa12.51□□□□□ -0.41
ATXN3-201ENST00000340660 RTP5Q14D33 572 aa12.51□□□□□ -0.41
ATXN3-201ENST00000340660 TEAD2Q15562 447 aa12.51□□□□□ -0.41
ATXN3-201ENST00000340660 SLC35G1Q2M3R5 365 aa12.51□□□□□ -0.41
ATXN3-201ENST00000340660 ARHGAP29Q52LW3 1261 aa12.51□□□□□ -0.41
ATXN3-201ENST00000340660 KIAA1614Q5VZ46 1190 aa12.51□□□□□ -0.41
ATXN3-201ENST00000340660 CRYBG3Q68DQ2 2970 aa12.51□□□□□ -0.41
ATXN3-201ENST00000340660 NAIF1Q69YI7 327 aaPredicted RBP12.51□□□□□ -0.41
ATXN3-201ENST00000340660 SNRNP27Q8WVK2 155 aaKnown RBP12.51□□□□□ -0.41
ATXN3-201ENST00000340660 ZKSCAN3Q9BRR0 538 aa12.51□□□□□ -0.41
ATXN3-201ENST00000340660 TTPALQ9BTX7 342 aa12.51□□□□□ -0.41
ATXN3-201ENST00000340660 ZCCHC2Q9C0B9 1178 aaKnown RBP12.51□□□□□ -0.41
ATXN3-201ENST00000340660 LRRC4CQ9HCJ2 640 aa12.51□□□□□ -0.41
ATXN3-201ENST00000340660 POM121CA8CG34 1229 aa12.5□□□□□ -0.41
ATXN3-201ENST00000340660 BACH1O14867 736 aa12.5□□□□□ -0.41
ATXN3-201ENST00000340660 SCNN1GP51170 649 aa12.5□□□□□ -0.41
ATXN3-201ENST00000340660 TLE1Q04724 770 aa12.5□□□□□ -0.41
ATXN3-201ENST00000340660 ITPRIPL2Q3MIP1 535 aa12.5□□□□□ -0.41
ATXN3-201ENST00000340660 SPDYCQ5MJ68 293 aa12.5□□□□□ -0.41
ATXN3-201ENST00000340660 USP17L6PQ6QN14 398 aa12.5□□□□□ -0.41
ATXN3-201ENST00000340660 NLRP8Q86W28 1048 aa12.5□□□□□ -0.41
ATXN3-201ENST00000340660 CEP57Q86XR8 500 aa12.5□□□□□ -0.41
ATXN3-201ENST00000340660 FAM26EQ8N5C1 309 aa12.5□□□□□ -0.41
ATXN3-201ENST00000340660 LGMNQ99538 433 aa12.5□□□□□ -0.41
ATXN3-201ENST00000340660 STARD5Q9NSY2 213 aa12.5□□□□□ -0.41
ATXN3-201ENST00000340660 CACNG4Q9UBN1 327 aa12.5□□□□□ -0.41
ATXN3-201ENST00000340660 GDF2Q9UK05 429 aaPredicted RBP12.5□□□□□ -0.41
ATXN3-201ENST00000340660 HCN2Q9UL51 889 aa12.5□□□□□ -0.41
ATXN3-201ENST00000340660 MTORP42345 2549 aa12.5□□□□□ -0.41
ATXN3-201ENST00000340660 ABCA2Q9BZC7 2435 aa12.49□□□□□ -0.41
ATXN3-201ENST00000340660 SF3B1O75533 1304 aaKnown RBP eCLIP12.49□□□□□ -0.414e-12■■■■■ 275.7
ATXN3-201ENST00000340660 ARL5CA6NH57 179 aa12.49□□□□□ -0.41
ATXN3-201ENST00000340660 OTOL1A6NHN0 477 aaPredicted RBP12.49□□□□□ -0.41
ATXN3-201ENST00000340660 CCNE2O96020 404 aa12.49□□□□□ -0.41
ATXN3-201ENST00000340660 LRG1P02750 347 aa12.49□□□□□ -0.41
ATXN3-201ENST00000340660 BMP4P12644 408 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms