RNA–Protein interactions for RNA: ENST00000340623.4

C2orf88-201, Transcript of chromosome 2 open reading frame 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C2orf88, Length 4,035 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2orf88-201ENST00000340623 GOLGA7BQ2TAP0 167 aa12.44□□□□□ -0.42
C2orf88-201ENST00000340623 FAM228AQ86W67 206 aa12.44□□□□□ -0.42
C2orf88-201ENST00000340623 UHMK1Q8TAS1 419 aaKnown RBP12.44□□□□□ -0.42
C2orf88-201ENST00000340623 COLEC11Q9BWP8 271 aa12.44□□□□□ -0.42
C2orf88-201ENST00000340623 SMYD3Q9H7B4 428 aa12.44□□□□□ -0.42
C2orf88-201ENST00000340623 IFT122Q9HBG6 1241 aa12.44□□□□□ -0.42
C2orf88-201ENST00000340623 TUBGCP4Q9UGJ1 667 aa12.44□□□□□ -0.42
C2orf88-201ENST00000340623 FAN1Q9Y2M0 1017 aa12.44□□□□□ -0.42
C2orf88-201ENST00000340623 PTPN22Q9Y2R2 807 aa12.44□□□□□ -0.42
C2orf88-201ENST00000340623 KPNA7A9QM74 516 aa12.44□□□□□ -0.42
C2orf88-201ENST00000340623 ALDH2P05091 517 aa12.44□□□□□ -0.42
C2orf88-201ENST00000340623 ODC1P11926 461 aa12.44□□□□□ -0.42
C2orf88-201ENST00000340623 ATICP31939 592 aa12.44□□□□□ -0.42
C2orf88-201ENST00000340623 GCNT1Q02742 428 aa12.44□□□□□ -0.42
C2orf88-201ENST00000340623 BTG3Q14201 252 aaPredicted RBP12.44□□□□□ -0.42
C2orf88-201ENST00000340623 USP38Q8NB14 1042 aa12.44□□□□□ -0.42
C2orf88-201ENST00000340623 CALN1Q9BXU9 219 aa12.44□□□□□ -0.42
C2orf88-201ENST00000340623 GOLPH3Q9H4A6 298 aa12.44□□□□□ -0.42
C2orf88-201ENST00000340623 ZWILCHQ9H900 591 aa12.44□□□□□ -0.42
C2orf88-201ENST00000340623 UBN1Q9NPG3 1134 aa12.44□□□□□ -0.42
C2orf88-201ENST00000340623 ABI2Q9NYB9 513 aaPredicted RBP12.44□□□□□ -0.42
C2orf88-201ENST00000340623 PCSK1NQ9UHG2 260 aa12.44□□□□□ -0.42
C2orf88-201ENST00000340623 MAGED2Q9UNF1 606 aaPredicted RBP12.44□□□□□ -0.42
C2orf88-201ENST00000340623 JRKLQ9Y4A0 524 aa12.44□□□□□ -0.42
C2orf88-201ENST00000340623 CST3P01034 146 aaPredicted RBP12.44□□□□□ -0.42
C2orf88-201ENST00000340623 ATP1A1P05023 1023 aaKnown RBP12.44□□□□□ -0.42
C2orf88-201ENST00000340623 CTGFP29279 349 aa12.44□□□□□ -0.42
C2orf88-201ENST00000340623 GRIK1P39086 918 aa12.44□□□□□ -0.42
C2orf88-201ENST00000340623 CDR2Q01850 454 aa12.44□□□□□ -0.42
C2orf88-201ENST00000340623 NAB2Q15742 525 aa12.44□□□□□ -0.42
C2orf88-201ENST00000340623 TAS1R3Q7RTX0 852 aa12.44□□□□□ -0.42
C2orf88-201ENST00000340623 RNF139Q8WU17 664 aa12.44□□□□□ -0.42
C2orf88-201ENST00000340623 RFFLQ8WZ73 363 aa12.44□□□□□ -0.42
C2orf88-201ENST00000340623 CYFIP2Q96F07 1278 aa12.44□□□□□ -0.42
C2orf88-201ENST00000340623 FIZ1Q96SL8 496 aa12.44□□□□□ -0.42
C2orf88-201ENST00000340623 PACSIN1Q9BY11 444 aa12.44□□□□□ -0.42
C2orf88-201ENST00000340623 RASSF4Q9H2L5 321 aa12.44□□□□□ -0.42
C2orf88-201ENST00000340623 ZNF446Q9NWS9 450 aa12.44□□□□□ -0.42
C2orf88-201ENST00000340623 STIM2Q9P246 746 aa12.44□□□□□ -0.42
C2orf88-201ENST00000340623 STRIP2Q9ULQ0 834 aa12.44□□□□□ -0.42
C2orf88-201ENST00000340623 SMIM28A0A1B0GU29 152 aa12.43□□□□□ -0.42
C2orf88-201ENST00000340623 LRRD1A4D1F6 860 aa12.43□□□□□ -0.42
C2orf88-201ENST00000340623 PODXLO00592 558 aa12.43□□□□□ -0.42
C2orf88-201ENST00000340623 STBD1O95210 358 aa12.43□□□□□ -0.42
C2orf88-201ENST00000340623 ATP11AP98196 1134 aa12.43□□□□□ -0.42
C2orf88-201ENST00000340623 PTPN11Q06124 597 aaPredicted RBP12.43□□□□□ -0.42
C2orf88-201ENST00000340623 NFIL3Q16649 462 aa12.43□□□□□ -0.42
C2orf88-201ENST00000340623 SLC10A6Q3KNW5 377 aa12.43□□□□□ -0.42
C2orf88-201ENST00000340623 CYP4A22Q5TCH4 519 aa12.43□□□□□ -0.42
C2orf88-201ENST00000340623 KCTD16Q68DU8 428 aa12.43□□□□□ -0.42
C2orf88-201ENST00000340623 GANQ9H2C0 597 aa12.43□□□□□ -0.42
C2orf88-201ENST00000340623 PLEKHA5Q9HAU0 1116 aa12.43□□□□□ -0.42
C2orf88-201ENST00000340623 KRIT1O00522 736 aa12.43□□□□□ -0.42
C2orf88-201ENST00000340623 NT5DC4Q86YG4 428 aa12.43□□□□□ -0.42
C2orf88-201ENST00000340623 RNF39Q9H2S5 420 aa12.43□□□□□ -0.42
C2orf88-201ENST00000340623 RASAL2Q9UJF2 1139 aa12.43□□□□□ -0.42
C2orf88-201ENST00000340623 C2CD2Q9Y426 696 aa12.43□□□□□ -0.42
C2orf88-201ENST00000340623 IFNB1P01574 187 aa12.43□□□□□ -0.42
C2orf88-201ENST00000340623 DNAJB2P25686 324 aa12.43□□□□□ -0.42
C2orf88-201ENST00000340623 POU5F1BQ06416 359 aa12.43□□□□□ -0.42
C2orf88-201ENST00000340623 FBXO46Q6PJ61 603 aaPredicted RBP12.43□□□□□ -0.42
C2orf88-201ENST00000340623 CCDC105Q8IYK2 499 aa12.43□□□□□ -0.42
C2orf88-201ENST00000340623 DDX27Q96GQ7 796 aaKnown RBP12.43□□□□□ -0.42
C2orf88-201ENST00000340623 FTHL17Q9BXU8 183 aa12.43□□□□□ -0.42
C2orf88-201ENST00000340623 KANSL3Q9P2N6 904 aa12.43□□□□□ -0.42
C2orf88-201ENST00000340623 MYH9P35579 1960 aaKnown RBP12.43□□□□□ -0.42
C2orf88-201ENST00000340623 FOCADQ5VW36 1801 aa12.42□□□□□ -0.42
C2orf88-201ENST00000340623 KRT1P04264 644 aa12.42□□□□□ -0.42
C2orf88-201ENST00000340623 VPS41P49754 854 aa12.42□□□□□ -0.42
C2orf88-201ENST00000340623 UBLCP1Q8WVY7 318 aaPredicted RBP12.42□□□□□ -0.42
C2orf88-201ENST00000340623 TMEM176AQ96HP8 235 aa12.42□□□□□ -0.42
C2orf88-201ENST00000340623 SENP8Q96LD8 212 aa12.42□□□□□ -0.42
C2orf88-201ENST00000340623 SEPT5Q99719 369 aaPredicted RBP12.42□□□□□ -0.42
C2orf88-201ENST00000340623 LACRTQ9GZZ8 138 aa12.42□□□□□ -0.42
C2orf88-201ENST00000340623 CYP3A43Q9HB55 503 aa12.42□□□□□ -0.42
C2orf88-201ENST00000340623 PRM3Q9NNZ6 103 aa12.42□□□□□ -0.42
C2orf88-201ENST00000340623 CHST12Q9NRB3 414 aa12.42□□□□□ -0.42
C2orf88-201ENST00000340623 DDX43Q9NXZ2 648 aaKnown RBP12.42□□□□□ -0.42
C2orf88-201ENST00000340623 PSME4Q14997 1843 aa12.42□□□□□ -0.42
C2orf88-201ENST00000340623 DICER1Q9UPY3 1922 aaKnown RBP12.42□□□□□ -0.42
C2orf88-201ENST00000340623 IGKV6-21A0A0C4DH24 114 aa12.42□□□□□ -0.42
C2orf88-201ENST00000340623 ESYT3A0FGR9 886 aa12.42□□□□□ -0.42
C2orf88-201ENST00000340623 PRPSAP2O60256 369 aa12.42□□□□□ -0.42
C2orf88-201ENST00000340623 B4GALT4O60513 344 aa12.42□□□□□ -0.42
C2orf88-201ENST00000340623 DYNLT1P63172 113 aa12.42□□□□□ -0.42
C2orf88-201ENST00000340623 GUCY2DQ02846 1103 aa12.42□□□□□ -0.42
C2orf88-201ENST00000340623 WHAMMP3Q1A5X7 153 aa12.42□□□□□ -0.42
C2orf88-201ENST00000340623 MGAT5BQ3V5L5 792 aa12.42□□□□□ -0.42
C2orf88-201ENST00000340623 TRIM60Q495X7 471 aa12.42□□□□□ -0.42
C2orf88-201ENST00000340623 NOMO2Q5JPE7 1267 aa12.42□□□□□ -0.42
C2orf88-201ENST00000340623 CFAP58Q5T655 872 aa12.42□□□□□ -0.42
C2orf88-201ENST00000340623 CDCA2Q69YH5 1023 aaPredicted RBP12.42□□□□□ -0.42
C2orf88-201ENST00000340623 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.42□□□□□ -0.42
C2orf88-201ENST00000340623 OTOP2Q7RTS6 562 aa12.42□□□□□ -0.42
C2orf88-201ENST00000340623 TMEM199Q8N511 208 aa12.42□□□□□ -0.42
C2orf88-201ENST00000340623 ZNF606Q8WXB4 792 aa12.42□□□□□ -0.42
C2orf88-201ENST00000340623 THAP2Q9H0W7 228 aa12.42□□□□□ -0.42
C2orf88-201ENST00000340623 AIPL1Q9NZN9 384 aa12.42□□□□□ -0.42
C2orf88-201ENST00000340623 BRCA1P38398 1863 aaKnown RBP12.42□□□□□ -0.42
C2orf88-201ENST00000340623 NT5C1B-RDH14C9J2C7 533 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms