RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 FRA10AC1Q70Z53 315 aa13.5□□□□□ -0.25
LIN54-201ENST00000340417 TRAPPC11Q7Z392 1133 aa13.5□□□□□ -0.25
LIN54-201ENST00000340417 SMPD4Q9NXE4 827 aa13.5□□□□□ -0.25
LIN54-201ENST00000340417 E5RI56 91 aa13.5□□□□□ -0.25
LIN54-201ENST00000340417 GLUD1P00367 558 aa13.5□□□□□ -0.25
LIN54-201ENST00000340417 KDELC2Q7Z4H8 507 aa13.5□□□□□ -0.25
LIN54-201ENST00000340417 CCDC13Q8IYE1 715 aa13.5□□□□□ -0.25
LIN54-201ENST00000340417 ASAP3Q8TDY4 903 aa13.5□□□□□ -0.25
LIN54-201ENST00000340417 C7orf43Q8WVR3 580 aa13.5□□□□□ -0.25
LIN54-201ENST00000340417 VPS39Q96JC1 886 aa13.5□□□□□ -0.25
LIN54-201ENST00000340417 MCEEQ96PE7 176 aa13.5□□□□□ -0.25
LIN54-201ENST00000340417 NRBP1Q9UHY1 535 aa13.5□□□□□ -0.25
LIN54-201ENST00000340417 TREHO43280 583 aa13.5□□□□□ -0.25
LIN54-201ENST00000340417 ASS1P00966 412 aaKnown RBP13.5□□□□□ -0.25
LIN54-201ENST00000340417 KPNA2P52292 529 aaKnown RBP13.5□□□□□ -0.25
LIN54-201ENST00000340417 BBS9Q3SYG4 887 aa13.5□□□□□ -0.25
LIN54-201ENST00000340417 PID1Q7Z2X4 250 aa13.5□□□□□ -0.25
LIN54-201ENST00000340417 KCNB2Q92953 911 aa13.5□□□□□ -0.25
LIN54-201ENST00000340417 TRMT13Q9NUP7 481 aaKnown RBP13.5□□□□□ -0.25
LIN54-201ENST00000340417 MIF4GDA9UHW6 222 aaKnown RBP13.5□□□□□ -0.25
LIN54-201ENST00000340417 ARVCFO00192 962 aa13.5□□□□□ -0.25
LIN54-201ENST00000340417 RTN3O95197 1032 aaPredicted RBP13.5□□□□□ -0.25
LIN54-201ENST00000340417 HSDL1Q3SXM5 330 aa13.5□□□□□ -0.25
LIN54-201ENST00000340417 PABPC1LQ4VXU2 614 aaKnown RBP13.5□□□□□ -0.25
LIN54-201ENST00000340417 OLFML2BQ68BL8 750 aa13.5□□□□□ -0.25
LIN54-201ENST00000340417 CPLX4Q7Z7G2 160 aa13.5□□□□□ -0.25
LIN54-201ENST00000340417 ANKS4BQ8N8V4 417 aa13.5□□□□□ -0.25
LIN54-201ENST00000340417 MAF1Q9H063 256 aa13.5□□□□□ -0.25
LIN54-201ENST00000340417 RNF19AQ9NV58 838 aa13.5□□□□□ -0.25
LIN54-201ENST00000340417 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.5□□□□□ -0.259e-9■■■■■ 32.5
LIN54-201ENST00000340417 AFDNP55196 1824 aaKnown RBP13.49□□□□□ -0.25
LIN54-201ENST00000340417 NT5C1B-RDH14C9J2C7 533 aa13.49□□□□□ -0.25
LIN54-201ENST00000340417 DNAJC6O75061 913 aa13.49□□□□□ -0.25
LIN54-201ENST00000340417 MAPTP10636 758 aaKnown RBP13.49□□□□□ -0.25
LIN54-201ENST00000340417 CYP2C18P33260 490 aa13.49□□□□□ -0.25
LIN54-201ENST00000340417 PRAMEP78395 509 aa13.49□□□□□ -0.25
LIN54-201ENST00000340417 GRIN1Q05586 938 aa13.49□□□□□ -0.25
LIN54-201ENST00000340417 CYP24A1Q07973 514 aa13.49□□□□□ -0.25
LIN54-201ENST00000340417 NT5DC4Q86YG4 428 aa13.49□□□□□ -0.25
LIN54-201ENST00000340417 USP33Q8TEY7 942 aa13.49□□□□□ -0.25
LIN54-201ENST00000340417 DEPDC1BQ8WUY9 529 aa13.49□□□□□ -0.25
LIN54-201ENST00000340417 PANX2Q96RD6 677 aa13.49□□□□□ -0.25
LIN54-201ENST00000340417 POC1B-GALNT4F8VUJ3 575 aa13.49□□□□□ -0.25
LIN54-201ENST00000340417 M0QYT0 321 aa13.49□□□□□ -0.25
LIN54-201ENST00000340417 ATP9AO75110 1047 aa13.49□□□□□ -0.25
LIN54-201ENST00000340417 YWHAQP27348 245 aa13.49□□□□□ -0.25
LIN54-201ENST00000340417 MYL6P60660 151 aa13.49□□□□□ -0.25
LIN54-201ENST00000340417 UHMK1Q8TAS1 419 aaKnown RBP13.49□□□□□ -0.25
LIN54-201ENST00000340417 AFAP1L1Q8TED9 768 aa13.49□□□□□ -0.25
LIN54-201ENST00000340417 USP20Q9Y2K6 914 aa13.49□□□□□ -0.25
LIN54-201ENST00000340417 ZMYM2Q9UBW7 1377 aa13.49□□□□□ -0.25
LIN54-201ENST00000340417 TOPAZ1Q8N9V7 1692 aa13.49□□□□□ -0.25
LIN54-201ENST00000340417 ZNF189O75820 626 aaPredicted RBP13.49□□□□□ -0.25
LIN54-201ENST00000340417 GPD1P21695 349 aa13.49□□□□□ -0.25
LIN54-201ENST00000340417 ROR1Q01973 937 aa13.49□□□□□ -0.25
LIN54-201ENST00000340417 SDCCAG8Q86SQ7 713 aaPredicted RBP13.49□□□□□ -0.25
LIN54-201ENST00000340417 HACD3Q9P035 362 aa13.49□□□□□ -0.25
LIN54-201ENST00000340417 C4BP0C0L5 1744 aa13.49□□□□□ -0.25
LIN54-201ENST00000340417 SOWAHBA6NEL2 793 aa13.49□□□□□ -0.25
LIN54-201ENST00000340417 ETFBP38117 255 aa13.49□□□□□ -0.25
LIN54-201ENST00000340417 CYP3A43Q9HB55 503 aa13.49□□□□□ -0.25
LIN54-201ENST00000340417 NDFIP2Q9NV92 336 aa13.49□□□□□ -0.25
LIN54-201ENST00000340417 GIT1Q9Y2X7 761 aa13.49□□□□□ -0.25
LIN54-201ENST00000340417 AKT1P31749 480 aa13.48□□□□□ -0.25
LIN54-201ENST00000340417 CXCR5P32302 372 aa13.48□□□□□ -0.25
LIN54-201ENST00000340417 CASP4P49662 377 aa13.48□□□□□ -0.25
LIN54-201ENST00000340417 PTK7Q13308 1070 aa13.48□□□□□ -0.25
LIN54-201ENST00000340417 PSMD5Q16401 504 aa13.48□□□□□ -0.25
LIN54-201ENST00000340417 SLC24A5Q71RS6 500 aa13.48□□□□□ -0.25
LIN54-201ENST00000340417 HDXQ7Z353 690 aa13.48□□□□□ -0.25
LIN54-201ENST00000340417 SLC35F6Q8N357 371 aa13.48□□□□□ -0.25
LIN54-201ENST00000340417 SCLYQ96I15 445 aa13.48□□□□□ -0.25
LIN54-201ENST00000340417 HES2Q9Y543 173 aa13.48□□□□□ -0.25
LIN54-201ENST00000340417 ITIH6Q6UXX5 1313 aa13.48□□□□□ -0.25
LIN54-201ENST00000340417 KPNA7A9QM74 516 aa13.48□□□□□ -0.25
LIN54-201ENST00000340417 FBXO21O94952 628 aa13.48□□□□□ -0.25
LIN54-201ENST00000340417 CCDC85BQ15834 202 aaPredicted RBP13.48□□□□□ -0.25
LIN54-201ENST00000340417 POP1Q99575 1024 aaKnown RBP13.48□□□□□ -0.25
LIN54-201ENST00000340417 TRIM66O15016 1216 aa13.48□□□□□ -0.25
LIN54-201ENST00000340417 SETDB1Q15047 1291 aa13.48□□□□□ -0.25
LIN54-201ENST00000340417 KRT71Q3SY84 523 aa13.48□□□□□ -0.25
LIN54-201ENST00000340417 NXNQ6DKJ4 435 aa13.48□□□□□ -0.25
LIN54-201ENST00000340417 METTL5Q9NRN9 209 aaKnown RBP13.48□□□□□ -0.25
LIN54-201ENST00000340417 FAM105AQ9NUU6 356 aa13.48□□□□□ -0.25
LIN54-201ENST00000340417 PSMD10O75832 226 aa13.48□□□□□ -0.25
LIN54-201ENST00000340417 NSUN2Q08J23 767 aaKnown RBP eCLIP13.48□□□□□ -0.25
LIN54-201ENST00000340417 ATAT1Q5SQI0 421 aa13.48□□□□□ -0.25
LIN54-201ENST00000340417 SKA1Q96BD8 255 aa13.48□□□□□ -0.25
LIN54-201ENST00000340417 SENP8Q96LD8 212 aa13.48□□□□□ -0.25
LIN54-201ENST00000340417 CINPQ9BW66 212 aaPredicted RBP13.48□□□□□ -0.25
LIN54-201ENST00000340417 PDIK1LQ8N165 341 aa13.48□□□□□ -0.25
LIN54-201ENST00000340417 SMARCD1Q96GM5 515 aa13.48□□□□□ -0.25
LIN54-201ENST00000340417 ELOVL4Q9GZR5 314 aa13.48□□□□□ -0.25
LIN54-201ENST00000340417 ZMYND10O75800 440 aa13.47□□□□□ -0.25
LIN54-201ENST00000340417 MX2P20592 715 aa13.47□□□□□ -0.25
LIN54-201ENST00000340417 GRIK3Q13003 919 aa13.47□□□□□ -0.25
LIN54-201ENST00000340417 UNC45BQ8IWX7 931 aa13.47□□□□□ -0.25
LIN54-201ENST00000340417 PADI3Q9ULW8 664 aa13.47□□□□□ -0.25
LIN54-201ENST00000340417 ARHGAP42A6NI28 874 aa13.47□□□□□ -0.25
LIN54-201ENST00000340417 ZNF697Q5TEC3 545 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms