RNA–Protein interactions for RNA: ENST00000340209.8

RBFOX1-202, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-202ENST00000340209 SMIM10L2BP0DMW5 78 aa10.78□□□□□ -0.68
RBFOX1-202ENST00000340209 GUCY1A3Q02108 690 aa10.78□□□□□ -0.68
RBFOX1-202ENST00000340209 MAMLD1Q13495 774 aa10.78□□□□□ -0.68
RBFOX1-202ENST00000340209 ZNF484Q5JVG2 852 aa10.78□□□□□ -0.68
RBFOX1-202ENST00000340209 FOXR1Q6PIV2 292 aa10.78□□□□□ -0.68
RBFOX1-202ENST00000340209 ZDHHC14Q8IZN3 488 aa10.78□□□□□ -0.68
RBFOX1-202ENST00000340209 NETO2Q8NC67 525 aa10.78□□□□□ -0.68
RBFOX1-202ENST00000340209 PPTC7Q8NI37 304 aa10.78□□□□□ -0.68
RBFOX1-202ENST00000340209 MLXIPLQ9NP71 852 aa10.78□□□□□ -0.68
RBFOX1-202ENST00000340209 GPATCH2LQ9NWQ4 482 aa10.78□□□□□ -0.68
RBFOX1-202ENST00000340209 DPP3Q9NY33 737 aa10.78□□□□□ -0.68
RBFOX1-202ENST00000340209 PPFIA4O75335 1185 aa10.78□□□□□ -0.68
RBFOX1-202ENST00000340209 MYZAPP0CAP1 466 aa10.78□□□□□ -0.68
RBFOX1-202ENST00000340209 CETN2P41208 172 aa10.78□□□□□ -0.68
RBFOX1-202ENST00000340209 RPL21P46778 160 aaKnown RBP10.78□□□□□ -0.68
RBFOX1-202ENST00000340209 NDST1P52848 882 aa10.78□□□□□ -0.68
RBFOX1-202ENST00000340209 MCL1Q07820 350 aa10.78□□□□□ -0.68
RBFOX1-202ENST00000340209 CCDC142Q17RM4 750 aa10.78□□□□□ -0.68
RBFOX1-202ENST00000340209 C16orf70Q9BSU1 422 aa10.78□□□□□ -0.68
RBFOX1-202ENST00000340209 ARHGAP39Q9C0H5 1083 aa10.78□□□□□ -0.68
RBFOX1-202ENST00000340209 MRPL47Q9HD33 250 aaKnown RBP10.78□□□□□ -0.68
RBFOX1-202ENST00000340209 GDF3Q9NR23 364 aa10.78□□□□□ -0.68
RBFOX1-202ENST00000340209 SLC5A4Q9NY91 659 aa10.78□□□□□ -0.68
RBFOX1-202ENST00000340209 NENFQ9UMX5 172 aa10.78□□□□□ -0.68
RBFOX1-202ENST00000340209 NOVA2Q9UNW9 492 aaKnown RBP10.78□□□□□ -0.68
RBFOX1-202ENST00000340209 DIS3Q9Y2L1 958 aaKnown RBP10.78□□□□□ -0.68
RBFOX1-202ENST00000340209 PAPPA2Q9BXP8 1791 aa10.77□□□□□ -0.68
RBFOX1-202ENST00000340209 PHF2O75151 1096 aa10.77□□□□□ -0.68
RBFOX1-202ENST00000340209 LGR5O75473 907 aa10.77□□□□□ -0.68
RBFOX1-202ENST00000340209 CYP1A2P05177 515 aa10.77□□□□□ -0.68
RBFOX1-202ENST00000340209 ZSCAN5DPP0CG00 497 aa10.77□□□□□ -0.68
RBFOX1-202ENST00000340209 SLC10A6Q3KNW5 377 aa10.77□□□□□ -0.68
RBFOX1-202ENST00000340209 CST9Q5W186 159 aa10.77□□□□□ -0.68
RBFOX1-202ENST00000340209 C11orf63Q6NUN7 778 aa10.77□□□□□ -0.68
RBFOX1-202ENST00000340209 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.77□□□□□ -0.68
RBFOX1-202ENST00000340209 JOSD2Q8TAC2 188 aa10.77□□□□□ -0.68
RBFOX1-202ENST00000340209 SDCBP2Q9H190 292 aa10.77□□□□□ -0.68
RBFOX1-202ENST00000340209 NOD1Q9Y239 953 aa10.77□□□□□ -0.68
RBFOX1-202ENST00000340209 INPP5FQ9Y2H2 1132 aa10.77□□□□□ -0.68
RBFOX1-202ENST00000340209 TIMM13Q9Y5L4 95 aaPredicted RBP10.77□□□□□ -0.68
RBFOX1-202ENST00000340209 ADGRA2Q96PE1 1338 aa10.77□□□□□ -0.68
RBFOX1-202ENST00000340209 SBF1O95248 1867 aa10.77□□□□□ -0.69
RBFOX1-202ENST00000340209 FOXO6A8MYZ6 492 aa10.77□□□□□ -0.69
RBFOX1-202ENST00000340209 HGSO14964 777 aaPredicted RBP10.77□□□□□ -0.69
RBFOX1-202ENST00000340209 ATP2C2O75185 946 aa10.77□□□□□ -0.69
RBFOX1-202ENST00000340209 PIAS1O75925 651 aa10.77□□□□□ -0.69
RBFOX1-202ENST00000340209 UNGP13051 313 aaPredicted RBP10.77□□□□□ -0.69
RBFOX1-202ENST00000340209 ETS1P14921 441 aa10.77□□□□□ -0.69
RBFOX1-202ENST00000340209 ACAT1P24752 427 aaKnown RBP10.77□□□□□ -0.69
RBFOX1-202ENST00000340209 TTMPQ5BVD1 217 aa10.77□□□□□ -0.69
RBFOX1-202ENST00000340209 C15orf39Q6ZRI6 1047 aa10.77□□□□□ -0.69
RBFOX1-202ENST00000340209 ILDR2Q71H61 639 aa10.77□□□□□ -0.69
RBFOX1-202ENST00000340209 FEZF2Q8TBJ5 459 aa10.77□□□□□ -0.69
RBFOX1-202ENST00000340209 HASPINQ8TF76 798 aa10.77□□□□□ -0.69
RBFOX1-202ENST00000340209 LRRC45Q96CN5 670 aa10.77□□□□□ -0.69
RBFOX1-202ENST00000340209 GCOM2Q9BZD3 368 aaPredicted RBP10.77□□□□□ -0.69
RBFOX1-202ENST00000340209 SIX4Q9UIU6 781 aa10.77□□□□□ -0.69
RBFOX1-202ENST00000340209 MAGEB2O15479 319 aa10.77□□□□□ -0.69
RBFOX1-202ENST00000340209 ZC3H11AO75152 810 aaKnown RBP eCLIP10.77□□□□□ -0.69
RBFOX1-202ENST00000340209 KRT3P12035 628 aa10.77□□□□□ -0.69
RBFOX1-202ENST00000340209 ZSCAN26Q16670 478 aa10.77□□□□□ -0.69
RBFOX1-202ENST00000340209 DUSP28Q4G0W2 176 aa10.77□□□□□ -0.69
RBFOX1-202ENST00000340209 PPP6R3Q5H9R7 873 aaPredicted RBP10.77□□□□□ -0.69
RBFOX1-202ENST00000340209 TSHZ1Q6ZSZ6 1077 aa10.77□□□□□ -0.69
RBFOX1-202ENST00000340209 FAM149B1Q96BN6 582 aa10.77□□□□□ -0.69
RBFOX1-202ENST00000340209 ERP44Q9BS26 406 aa10.77□□□□□ -0.69
RBFOX1-202ENST00000340209 LRRC4CQ9HCJ2 640 aa10.77□□□□□ -0.69
RBFOX1-202ENST00000340209 PARVAQ9NVD7 372 aa10.77□□□□□ -0.69
RBFOX1-202ENST00000340209 MTRF1LQ9UGC7 380 aaKnown RBP10.77□□□□□ -0.69
RBFOX1-202ENST00000340209 PASKQ96RG2 1323 aa10.76□□□□□ -0.69
RBFOX1-202ENST00000340209 SGK1O00141 431 aa10.76□□□□□ -0.69
RBFOX1-202ENST00000340209 STRNO43815 780 aa10.76□□□□□ -0.69
RBFOX1-202ENST00000340209 TSPAN1O60635 241 aa10.76□□□□□ -0.69
RBFOX1-202ENST00000340209 ABCD1P33897 745 aa10.76□□□□□ -0.69
RBFOX1-202ENST00000340209 RFC1P35251 1148 aaPredicted RBP10.76□□□□□ -0.69
RBFOX1-202ENST00000340209 PTPN20Q4JDL3 420 aa10.76□□□□□ -0.69
RBFOX1-202ENST00000340209 DENND2CQ68D51 928 aa10.76□□□□□ -0.69
RBFOX1-202ENST00000340209 OSBPL8Q9BZF1 889 aa10.76□□□□□ -0.69
RBFOX1-202ENST00000340209 RNF39Q9H2S5 420 aa10.76□□□□□ -0.69
RBFOX1-202ENST00000340209 FZD8Q9H461 694 aa10.76□□□□□ -0.69
RBFOX1-202ENST00000340209 SLITRK6Q9H5Y7 841 aa10.76□□□□□ -0.69
RBFOX1-202ENST00000340209 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.76□□□□□ -0.69
RBFOX1-202ENST00000340209 A8MXQ7 604 aa10.76□□□□□ -0.69
RBFOX1-202ENST00000340209 TULP2O00295 520 aa10.76□□□□□ -0.69
RBFOX1-202ENST00000340209 KIAA0391O15091 583 aaKnown RBP10.76□□□□□ -0.69
RBFOX1-202ENST00000340209 RECQL4O94761 1208 aa10.76□□□□□ -0.69
RBFOX1-202ENST00000340209 LCP1P13796 627 aa10.76□□□□□ -0.69
RBFOX1-202ENST00000340209 COILP38432 576 aaPredicted RBP10.76□□□□□ -0.69
RBFOX1-202ENST00000340209 ASPAP45381 313 aa10.76□□□□□ -0.69
RBFOX1-202ENST00000340209 SLC26A2P50443 739 aa10.76□□□□□ -0.69
RBFOX1-202ENST00000340209 MFSD10Q14728 455 aa10.76□□□□□ -0.69
RBFOX1-202ENST00000340209 MFSD7Q6UXD7 560 aa10.76□□□□□ -0.69
RBFOX1-202ENST00000340209 MON1BQ7L1V2 547 aa10.76□□□□□ -0.69
RBFOX1-202ENST00000340209 RHOT1Q8IXI2 618 aa10.76□□□□□ -0.69
RBFOX1-202ENST00000340209 WHAMMQ8TF30 809 aa10.76□□□□□ -0.69
RBFOX1-202ENST00000340209 CPXM1Q96SM3 734 aa10.76□□□□□ -0.69
RBFOX1-202ENST00000340209 TNFSF13BQ9Y275 285 aa10.76□□□□□ -0.69
RBFOX1-202ENST00000340209 LAMA2P24043 3122 aaKnown RBP10.76□□□□□ -0.69
RBFOX1-202ENST00000340209 PROSCO94903 275 aa10.76□□□□□ -0.69
RBFOX1-202ENST00000340209 ATF2P15336 505 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms