RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 ATP8A1Q9Y2Q0 1164 aa11.47□□□□□ -0.57
RTN3-201ENST00000338850 NR2E1Q9Y466 385 aa11.47□□□□□ -0.57
RTN3-201ENST00000338850 SAMM50Q9Y512 469 aa11.47□□□□□ -0.57
RTN3-201ENST00000338850 ACTL7BQ9Y614 415 aa11.47□□□□□ -0.57
RTN3-201ENST00000338850 STYXL1Q9Y6J8 313 aa11.47□□□□□ -0.57
RTN3-201ENST00000338850 A0A0C4DFX4 3053 aa11.47□□□□□ -0.57
RTN3-201ENST00000338850 RIPK2O43353 540 aa11.46□□□□□ -0.57
RTN3-201ENST00000338850 SORBS3O60504 671 aa11.46□□□□□ -0.57
RTN3-201ENST00000338850 B4GALT4O60513 344 aa11.46□□□□□ -0.57
RTN3-201ENST00000338850 DGAT1O75907 488 aa11.46□□□□□ -0.57
RTN3-201ENST00000338850 ABHD2P08910 425 aa11.46□□□□□ -0.57
RTN3-201ENST00000338850 UNGP13051 313 aaPredicted RBP11.46□□□□□ -0.57
RTN3-201ENST00000338850 DNAJB2P25686 324 aa11.46□□□□□ -0.57
RTN3-201ENST00000338850 PURAQ00577 322 aaKnown RBP11.46□□□□□ -0.57
RTN3-201ENST00000338850 CYP24A1Q07973 514 aa11.46□□□□□ -0.57
RTN3-201ENST00000338850 CALCOCO2Q13137 446 aa11.46□□□□□ -0.57
RTN3-201ENST00000338850 XRCC4Q13426 336 aa11.46□□□□□ -0.57
RTN3-201ENST00000338850 PRPF4BQ13523 1007 aaKnown RBP11.46□□□□□ -0.57
RTN3-201ENST00000338850 ODF2Q5BJF6 829 aa11.46□□□□□ -0.57
RTN3-201ENST00000338850 PSRC1Q6PGN9 363 aaPredicted RBP11.46□□□□□ -0.57
RTN3-201ENST00000338850 ZNF365Q70YC5 407 aa11.46□□□□□ -0.57
RTN3-201ENST00000338850 PIGWQ7Z7B1 504 aa11.46□□□□□ -0.57
RTN3-201ENST00000338850 KSR1Q8IVT5 923 aa11.46□□□□□ -0.57
RTN3-201ENST00000338850 GPD1LQ8N335 351 aa11.46□□□□□ -0.57
RTN3-201ENST00000338850 OR6J1Q8NGC5 347 aa11.46□□□□□ -0.57
RTN3-201ENST00000338850 OR2W6PQ8NHA6 318 aa11.46□□□□□ -0.57
RTN3-201ENST00000338850 CCHCR1Q8TD31 782 aa11.46□□□□□ -0.57
RTN3-201ENST00000338850 MYLIPQ8WY64 445 aa11.46□□□□□ -0.57
RTN3-201ENST00000338850 KRT35Q92764 455 aa11.46□□□□□ -0.57
RTN3-201ENST00000338850 ATP6V0A1Q93050 837 aa11.46□□□□□ -0.57
RTN3-201ENST00000338850 RNF25Q96BH1 459 aaPredicted RBP11.46□□□□□ -0.57
RTN3-201ENST00000338850 ZNF653Q96CK0 615 aa11.46□□□□□ -0.57
RTN3-201ENST00000338850 SEC16BQ96JE7 1060 aa11.46□□□□□ -0.57
RTN3-201ENST00000338850 MPHOSPH6Q99547 160 aaKnown RBP11.46□□□□□ -0.57
RTN3-201ENST00000338850 PDCD2LQ9BRP1 358 aa11.46□□□□□ -0.57
RTN3-201ENST00000338850 NUP85Q9BW27 656 aa11.46□□□□□ -0.57
RTN3-201ENST00000338850 IKZF4Q9H2S9 585 aa11.46□□□□□ -0.57
RTN3-201ENST00000338850 PPCSQ9HAB8 311 aa11.46□□□□□ -0.57
RTN3-201ENST00000338850 IL23AQ9NPF7 189 aa11.46□□□□□ -0.57
RTN3-201ENST00000338850 RAB20Q9NX57 234 aa11.46□□□□□ -0.57
RTN3-201ENST00000338850 CNTN6Q9UQ52 1028 aa11.46□□□□□ -0.57
RTN3-201ENST00000338850 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.46□□□□□ -0.57
RTN3-201ENST00000338850 PPME1Q9Y570 386 aa11.46□□□□□ -0.57
RTN3-201ENST00000338850 CAPN7Q9Y6W3 813 aa11.46□□□□□ -0.57
RTN3-201ENST00000338850 BACH1O14867 736 aa11.45□□□□□ -0.58
RTN3-201ENST00000338850 RGS16O15492 202 aaPredicted RBP11.45□□□□□ -0.58
RTN3-201ENST00000338850 SPOPO43791 374 aa11.45□□□□□ -0.58
RTN3-201ENST00000338850 CAND2O75155 1236 aa11.45□□□□□ -0.58
RTN3-201ENST00000338850 GAS8O95995 478 aa11.45□□□□□ -0.58
RTN3-201ENST00000338850 CYP1A1P04798 512 aaPredicted RBP11.45□□□□□ -0.58
RTN3-201ENST00000338850 MYL3P08590 195 aa11.45□□□□□ -0.58
RTN3-201ENST00000338850 ADSSP30520 456 aa11.45□□□□□ -0.58
RTN3-201ENST00000338850 HNRNPH1P31943 449 aaKnown RBP11.45□□□□□ -0.58
RTN3-201ENST00000338850 CPT1AP50416 773 aa11.45□□□□□ -0.58
RTN3-201ENST00000338850 SEC24CP53992 1094 aa11.45□□□□□ -0.58
RTN3-201ENST00000338850 PLTPP55058 493 aa11.45□□□□□ -0.58
RTN3-201ENST00000338850 PSMD6Q15008 389 aa11.45□□□□□ -0.58
RTN3-201ENST00000338850 ANKRD20A8PQ5CZ79 823 aa11.45□□□□□ -0.58
RTN3-201ENST00000338850 TTC19Q6DKK2 380 aaPredicted RBP11.45□□□□□ -0.58
RTN3-201ENST00000338850 TTC27Q6P3X3 843 aa11.45□□□□□ -0.58
RTN3-201ENST00000338850 DRICH1Q6PGQ1 229 aaPredicted RBP11.45□□□□□ -0.58
RTN3-201ENST00000338850 KCNV1Q6PIU1 500 aa11.45□□□□□ -0.58
RTN3-201ENST00000338850 NLRX1Q86UT6 975 aa11.45□□□□□ -0.58
RTN3-201ENST00000338850 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.45□□□□□ -0.58
RTN3-201ENST00000338850 ANKS4BQ8N8V4 417 aa11.45□□□□□ -0.58
RTN3-201ENST00000338850 CCDC197Q8NCU1 140 aa11.45□□□□□ -0.58
RTN3-201ENST00000338850 MAFAQ8NHW3 353 aaPredicted RBP11.45□□□□□ -0.58
RTN3-201ENST00000338850 IL31RAQ8NI17 732 aa11.45□□□□□ -0.58
RTN3-201ENST00000338850 CCT6BQ92526 530 aa11.45□□□□□ -0.58
RTN3-201ENST00000338850 COPS5Q92905 334 aa11.45□□□□□ -0.58
RTN3-201ENST00000338850 C18orf8Q96DM3 657 aa11.45□□□□□ -0.58
RTN3-201ENST00000338850 ADAM7Q9H2U9 754 aa11.45□□□□□ -0.58
RTN3-201ENST00000338850 PXMP2Q9NR77 195 aa11.45□□□□□ -0.58
RTN3-201ENST00000338850 SEPT11Q9NVA2 429 aaKnown RBP11.45□□□□□ -0.58
RTN3-201ENST00000338850 ARHGAP28Q9P2N2 729 aa11.45□□□□□ -0.58
RTN3-201ENST00000338850 LGALS13Q9UHV8 139 aa11.45□□□□□ -0.58
RTN3-201ENST00000338850 SNX24Q9Y343 169 aa11.45□□□□□ -0.58
RTN3-201ENST00000338850 PCDHB2Q9Y5E7 798 aa11.45□□□□□ -0.58
RTN3-201ENST00000338850 PCDHA10Q9Y5I2 948 aa11.45□□□□□ -0.58
RTN3-201ENST00000338850 A6NJR5 290 aa11.44□□□□□ -0.58
RTN3-201ENST00000338850 GRXCR1A8MXD5 290 aa11.44□□□□□ -0.58
RTN3-201ENST00000338850 RASGRF2O14827 1237 aa11.44□□□□□ -0.58
RTN3-201ENST00000338850 STBD1O95210 358 aa11.44□□□□□ -0.58
RTN3-201ENST00000338850 ARIH2O95376 493 aa11.44□□□□□ -0.58
RTN3-201ENST00000338850 RARAP10276 462 aa11.44□□□□□ -0.58
RTN3-201ENST00000338850 TXNP10599 105 aaKnown RBP11.44□□□□□ -0.58
RTN3-201ENST00000338850 PYGMP11217 842 aa11.44□□□□□ -0.58
RTN3-201ENST00000338850 FOSL2P15408 326 aa11.44□□□□□ -0.58
RTN3-201ENST00000338850 CCND2P30279 289 aa11.44□□□□□ -0.58
RTN3-201ENST00000338850 PTPN7P35236 360 aa11.44□□□□□ -0.58
RTN3-201ENST00000338850 NPTX2P47972 431 aa11.44□□□□□ -0.58
RTN3-201ENST00000338850 MARCKSL1P49006 195 aa11.44□□□□□ -0.58
RTN3-201ENST00000338850 SLC18A1P54219 525 aa11.44□□□□□ -0.58
RTN3-201ENST00000338850 CCL23P55773 120 aa11.44□□□□□ -0.58
RTN3-201ENST00000338850 PEX3P56589 373 aa11.44□□□□□ -0.58
RTN3-201ENST00000338850 ZNF211Q13398 564 aaPredicted RBP11.44□□□□□ -0.58
RTN3-201ENST00000338850 MESDQ14696 234 aa11.44□□□□□ -0.58
RTN3-201ENST00000338850 GRIN2CQ14957 1233 aa11.44□□□□□ -0.58
RTN3-201ENST00000338850 RASA2Q15283 850 aa11.44□□□□□ -0.58
RTN3-201ENST00000338850 DNAAF5Q86Y56 855 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms