RNA–Protein interactions for RNA: ENST00000337354.8

SEC13-201, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEC13, Length 1,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-201ENST00000337354 ADGRF2Q8IZF7 708 aa16.47■□□□□ 0.23
SEC13-201ENST00000337354 TTC39CQ8N584 583 aa16.47■□□□□ 0.23
SEC13-201ENST00000337354 AUTS2Q8WXX7 1259 aa16.47■□□□□ 0.23
SEC13-201ENST00000337354 FAM81BQ96LP2 452 aa16.47■□□□□ 0.23
SEC13-201ENST00000337354 ACBD6Q9BR61 282 aa16.47■□□□□ 0.23
SEC13-201ENST00000337354 NIF3L1Q9GZT8 377 aa16.47■□□□□ 0.23
SEC13-201ENST00000337354 VPS16Q9H269 839 aa16.47■□□□□ 0.23
SEC13-201ENST00000337354 TLE6Q9H808 572 aa16.47■□□□□ 0.23
SEC13-201ENST00000337354 TAB2Q9NYJ8 693 aa16.47■□□□□ 0.23
SEC13-201ENST00000337354 TRANK1O15050 2925 aa16.46■□□□□ 0.23
SEC13-201ENST00000337354 PES1O00541 588 aaKnown RBP16.46■□□□□ 0.23
SEC13-201ENST00000337354 TEX28O15482 410 aa16.46■□□□□ 0.23
SEC13-201ENST00000337354 ATP1A3P13637 1013 aa16.46■□□□□ 0.23
SEC13-201ENST00000337354 WARSP23381 471 aaKnown RBP16.46■□□□□ 0.23
SEC13-201ENST00000337354 TBXAS1P24557 533 aaPredicted RBP16.46■□□□□ 0.23
SEC13-201ENST00000337354 KLRC2P26717 231 aa16.46■□□□□ 0.23
SEC13-201ENST00000337354 FILIP1LQ4L180 1135 aa16.46■□□□□ 0.23
SEC13-201ENST00000337354 APTXQ7Z2E3 356 aaKnown RBP16.46■□□□□ 0.23
SEC13-201ENST00000337354 NT5C1BQ96P26 610 aa16.46■□□□□ 0.23
SEC13-201ENST00000337354 CLSTN3Q9BQT9 956 aa16.46■□□□□ 0.23
SEC13-201ENST00000337354 BCO2Q9BYV7 579 aa16.46■□□□□ 0.23
SEC13-201ENST00000337354 APOBEC3GQ9HC16 384 aaKnown RBP16.46■□□□□ 0.23
SEC13-201ENST00000337354 FBXL5Q9UKA1 691 aa16.46■□□□□ 0.23
SEC13-201ENST00000337354 COL6A3P12111 3177 aa16.46■□□□□ 0.22
SEC13-201ENST00000337354 LRRN2O75325 713 aa16.45■□□□□ 0.22
SEC13-201ENST00000337354 PCSK1P29120 753 aa16.45■□□□□ 0.22
SEC13-201ENST00000337354 GNL1P36915 607 aaPredicted RBP16.45■□□□□ 0.22
SEC13-201ENST00000337354 ASPAP45381 313 aa16.45■□□□□ 0.22
SEC13-201ENST00000337354 SMARCB1Q12824 385 aa16.45■□□□□ 0.22
SEC13-201ENST00000337354 RAB33AQ14088 237 aa16.45■□□□□ 0.22
SEC13-201ENST00000337354 DUSP6Q16828 381 aa16.45■□□□□ 0.22
SEC13-201ENST00000337354 SPOPLQ6IQ16 392 aa16.45■□□□□ 0.22
SEC13-201ENST00000337354 JAKMIP2Q96AA8 810 aa16.45■□□□□ 0.22
SEC13-201ENST00000337354 DNAI2Q9GZS0 605 aa16.45■□□□□ 0.22
SEC13-201ENST00000337354 INTS2Q9H0H0 1204 aaKnown RBP16.45■□□□□ 0.22
SEC13-201ENST00000337354 SNX25Q9H3E2 840 aa16.45■□□□□ 0.22
SEC13-201ENST00000337354 DDX43Q9NXZ2 648 aaKnown RBP16.45■□□□□ 0.22
SEC13-201ENST00000337354 GCNT4Q9P109 453 aa16.45■□□□□ 0.22
SEC13-201ENST00000337354 DPP7Q9UHL4 492 aa16.45■□□□□ 0.22
SEC13-201ENST00000337354 MAFFQ9ULX9 164 aa16.45■□□□□ 0.22
SEC13-201ENST00000337354 POLIQ9UNA4 740 aa16.45■□□□□ 0.22
SEC13-201ENST00000337354 CDY1Q9Y6F8 540 aa16.45■□□□□ 0.22
SEC13-201ENST00000337354 LGALS16A8MUM7 142 aa16.44■□□□□ 0.22
SEC13-201ENST00000337354 CLASP2O75122 1294 aaKnown RBP16.44■□□□□ 0.22
SEC13-201ENST00000337354 SERPINC1P01008 464 aa16.44■□□□□ 0.22
SEC13-201ENST00000337354 PON1P27169 355 aa16.44■□□□□ 0.22
SEC13-201ENST00000337354 OR1D2P34982 312 aa16.44■□□□□ 0.22
SEC13-201ENST00000337354 GCNT1Q02742 428 aa16.44■□□□□ 0.22
SEC13-201ENST00000337354 TCEAL5Q5H9L2 206 aa16.44■□□□□ 0.22
SEC13-201ENST00000337354 TRIM65Q6PJ69 517 aa16.44■□□□□ 0.22
SEC13-201ENST00000337354 ENOSF1Q7L5Y1 443 aa16.44■□□□□ 0.22
SEC13-201ENST00000337354 RBM23Q86U06 439 aaKnown RBP16.44■□□□□ 0.22
SEC13-201ENST00000337354 UNC93AQ86WB7 457 aa16.44■□□□□ 0.22
SEC13-201ENST00000337354 OR6B3Q8NGW1 331 aa16.44■□□□□ 0.22
SEC13-201ENST00000337354 ZNF461Q8TAF7 563 aa16.44■□□□□ 0.22
SEC13-201ENST00000337354 KBTBD7Q8WVZ9 684 aa16.44■□□□□ 0.22
SEC13-201ENST00000337354 TATDN2Q93075 761 aa16.44■□□□□ 0.22
SEC13-201ENST00000337354 CRACR2AQ9BSW2 395 aa16.44■□□□□ 0.22
SEC13-201ENST00000337354 PCDHGC5Q9Y5F6 944 aa16.44■□□□□ 0.22
SEC13-201ENST00000337354 A8MXQ7 604 aa16.43■□□□□ 0.22
SEC13-201ENST00000337354 PER2O15055 1255 aa16.43■□□□□ 0.22
SEC13-201ENST00000337354 RPL17P18621 184 aaKnown RBP16.43■□□□□ 0.22
SEC13-201ENST00000337354 TRIM21P19474 475 aaKnown RBP16.43■□□□□ 0.22
SEC13-201ENST00000337354 SLC9A1P19634 815 aa16.43■□□□□ 0.22
SEC13-201ENST00000337354 NRIP1P48552 1158 aa16.43■□□□□ 0.22
SEC13-201ENST00000337354 CDH8P55286 799 aa16.43■□□□□ 0.22
SEC13-201ENST00000337354 YWHAEP62258 255 aaKnown RBP16.43■□□□□ 0.22
SEC13-201ENST00000337354 TSPY1Q01534 308 aa16.43■□□□□ 0.22
SEC13-201ENST00000337354 KCNMA1Q12791 1236 aa16.43■□□□□ 0.22
SEC13-201ENST00000337354 LRMPQ12912 555 aa16.43■□□□□ 0.22
SEC13-201ENST00000337354 GPR17Q13304 367 aa16.43■□□□□ 0.22
SEC13-201ENST00000337354 CUL2Q13617 745 aa16.43■□□□□ 0.22
SEC13-201ENST00000337354 TPGS2Q68CL5 300 aa16.43■□□□□ 0.22
SEC13-201ENST00000337354 ELMSAN1Q6PJG2 1045 aa16.43■□□□□ 0.22
SEC13-201ENST00000337354 ADGRD2Q7Z7M1 963 aa16.43■□□□□ 0.22
SEC13-201ENST00000337354 DCP1BQ8IZD4 617 aaKnown RBP16.43■□□□□ 0.22
SEC13-201ENST00000337354 HDAC7Q8WUI4 952 aa16.43■□□□□ 0.22
SEC13-201ENST00000337354 MRPL45Q9BRJ2 306 aaKnown RBP16.43■□□□□ 0.22
SEC13-201ENST00000337354 ZCWPW1Q9H0M4 648 aa16.43■□□□□ 0.22
SEC13-201ENST00000337354 RTN4Q9NQC3 1192 aaKnown RBP16.43■□□□□ 0.22
SEC13-201ENST00000337354 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.43■□□□□ 0.223e-6■■■■■ 39.7
SEC13-201ENST00000337354 CDH9Q9ULB4 789 aa16.43■□□□□ 0.22
SEC13-201ENST00000337354 BARX2Q9UMQ3 279 aaPredicted RBP16.43■□□□□ 0.22
SEC13-201ENST00000337354 ABLIM3O94929 683 aa16.42■□□□□ 0.22
SEC13-201ENST00000337354 WEE2P0C1S8 567 aa16.42■□□□□ 0.22
SEC13-201ENST00000337354 SRGAP2BP0DMP2 458 aa16.42■□□□□ 0.22
SEC13-201ENST00000337354 CLCN4P51793 760 aa16.42■□□□□ 0.22
SEC13-201ENST00000337354 ROR1Q01973 937 aa16.42■□□□□ 0.22
SEC13-201ENST00000337354 UBXN1Q04323 297 aa16.42■□□□□ 0.22
SEC13-201ENST00000337354 INCA1Q0VD86 236 aa16.42■□□□□ 0.22
SEC13-201ENST00000337354 HYAL1Q12794 435 aa16.42■□□□□ 0.22
SEC13-201ENST00000337354 MAPRE1Q15691 268 aaKnown RBP16.42■□□□□ 0.22
SEC13-201ENST00000337354 PHLDB3Q6NSJ2 640 aa16.42■□□□□ 0.22
SEC13-201ENST00000337354 LILRA6Q6PI73 481 aa16.42■□□□□ 0.22
SEC13-201ENST00000337354 RSPO2Q6UXX9 243 aaPredicted RBP16.42■□□□□ 0.22
SEC13-201ENST00000337354 TMEM184AQ6ZMB5 413 aa16.42■□□□□ 0.22
SEC13-201ENST00000337354 RTL10Q7L3V2 364 aa16.42■□□□□ 0.22
SEC13-201ENST00000337354 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.42■□□□□ 0.22
SEC13-201ENST00000337354 PPM1KQ8N3J5 372 aa16.42■□□□□ 0.22
SEC13-201ENST00000337354 EFHBQ8N7U6 833 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms