RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 BMPR2Q13873 1038 aa8.67□□□□□ -1.02
HPS4-201ENST00000336873 HIF1AQ16665 826 aa8.67□□□□□ -1.02
HPS4-201ENST00000336873 DUOXA2Q1HG44 320 aa8.67□□□□□ -1.02
HPS4-201ENST00000336873 MUM1Q2TAK8 710 aa8.67□□□□□ -1.02
HPS4-201ENST00000336873 XKR3Q5GH77 459 aa8.67□□□□□ -1.02
HPS4-201ENST00000336873 DPP9Q86TI2 863 aa8.67□□□□□ -1.02
HPS4-201ENST00000336873 EXOC3L1Q86VI1 746 aa8.67□□□□□ -1.02
HPS4-201ENST00000336873 STAMBPL1Q96FJ0 436 aa8.67□□□□□ -1.02
HPS4-201ENST00000336873 TRAIPQ9BWF2 469 aa8.67□□□□□ -1.02
HPS4-201ENST00000336873 ACSS2Q9NR19 701 aa8.67□□□□□ -1.02
HPS4-201ENST00000336873 HESX1Q9UBX0 185 aa8.67□□□□□ -1.02
HPS4-201ENST00000336873 STRCQ7RTU9 1775 aa8.67□□□□□ -1.02
HPS4-201ENST00000336873 DCAF8L1A6NGE4 600 aa8.67□□□□□ -1.02
HPS4-201ENST00000336873 KCNN4O15554 427 aa8.67□□□□□ -1.02
HPS4-201ENST00000336873 B4GALT5O43286 388 aa8.67□□□□□ -1.02
HPS4-201ENST00000336873 AVILO75366 819 aa8.67□□□□□ -1.02
HPS4-201ENST00000336873 ZBED1O96006 694 aa8.67□□□□□ -1.02
HPS4-201ENST00000336873 F7P08709 466 aaPredicted RBP8.67□□□□□ -1.02
HPS4-201ENST00000336873 TROVE2P10155 538 aaKnown RBP eCLIP8.67□□□□□ -1.02
HPS4-201ENST00000336873 SFNP31947 248 aa8.67□□□□□ -1.02
HPS4-201ENST00000336873 GCKP35557 465 aa8.67□□□□□ -1.02
HPS4-201ENST00000336873 EIF3EP60228 445 aaKnown RBP8.67□□□□□ -1.02
HPS4-201ENST00000336873 OTUD4Q01804 1114 aaKnown RBP8.67□□□□□ -1.02
HPS4-201ENST00000336873 NME3Q13232 169 aa8.67□□□□□ -1.02
HPS4-201ENST00000336873 TFDP1Q14186 410 aa8.67□□□□□ -1.02
HPS4-201ENST00000336873 NBPF20Q3BBV1 942 aa8.67□□□□□ -1.02
HPS4-201ENST00000336873 CFAP157Q5JU67 520 aa8.67□□□□□ -1.02
HPS4-201ENST00000336873 MROH9Q5TGP6 573 aa8.67□□□□□ -1.02
HPS4-201ENST00000336873 MOXD1Q6UVY6 613 aa8.67□□□□□ -1.02
HPS4-201ENST00000336873 LONP2Q86WA8 852 aa8.67□□□□□ -1.02
HPS4-201ENST00000336873 PDCD7Q8N8D1 485 aaKnown RBP8.67□□□□□ -1.02
HPS4-201ENST00000336873 MAIP1Q8WWC4 291 aa8.67□□□□□ -1.02
HPS4-201ENST00000336873 TTC1Q99614 292 aa8.67□□□□□ -1.02
HPS4-201ENST00000336873 SENP7Q9BQF6 1050 aa8.67□□□□□ -1.02
HPS4-201ENST00000336873 CISHQ9NSE2 258 aa8.67□□□□□ -1.02
HPS4-201ENST00000336873 PPARGC1AQ9UBK2 798 aaKnown RBP8.67□□□□□ -1.02
HPS4-201ENST00000336873 LOC100653049A0A140TA62 436 aa8.67□□□□□ -1.02
HPS4-201ENST00000336873 KIF1CO43896 1103 aaKnown RBP8.67□□□□□ -1.02
HPS4-201ENST00000336873 KRT34O76011 436 aa8.67□□□□□ -1.02
HPS4-201ENST00000336873 LCA5LO95447 670 aa8.67□□□□□ -1.02
HPS4-201ENST00000336873 NPTXRO95502 500 aa8.67□□□□□ -1.02
HPS4-201ENST00000336873 DSG3P32926 999 aa8.67□□□□□ -1.02
HPS4-201ENST00000336873 GPC3P51654 580 aa8.67□□□□□ -1.02
HPS4-201ENST00000336873 EPHB1P54762 984 aa8.67□□□□□ -1.02
HPS4-201ENST00000336873 AUHQ13825 339 aaKnown RBP8.67□□□□□ -1.02
HPS4-201ENST00000336873 TAF11Q15544 211 aa8.67□□□□□ -1.02
HPS4-201ENST00000336873 PAN2Q504Q3 1202 aaKnown RBP8.67□□□□□ -1.02
HPS4-201ENST00000336873 TDRD10Q5VZ19 366 aaKnown RBP8.67□□□□□ -1.02
HPS4-201ENST00000336873 NXNQ6DKJ4 435 aa8.67□□□□□ -1.02
HPS4-201ENST00000336873 TXNRD3NBQ6F5E7 133 aa8.67□□□□□ -1.02
HPS4-201ENST00000336873 CCDC62Q6P9F0 684 aa8.67□□□□□ -1.02
HPS4-201ENST00000336873 NPNTQ6UXI9 565 aa8.67□□□□□ -1.02
HPS4-201ENST00000336873 DNAAF3Q8N9W5 541 aa8.67□□□□□ -1.02
HPS4-201ENST00000336873 ASAP3Q8TDY4 903 aa8.67□□□□□ -1.02
HPS4-201ENST00000336873 P3H4Q92791 437 aa8.67□□□□□ -1.02
HPS4-201ENST00000336873 MED10Q9BTT4 135 aa8.67□□□□□ -1.02
HPS4-201ENST00000336873 PARVAQ9NVD7 372 aa8.67□□□□□ -1.02
HPS4-201ENST00000336873 UVRAGQ9P2Y5 699 aa8.67□□□□□ -1.02
HPS4-201ENST00000336873 USP15Q9Y4E8 981 aaPredicted RBP8.67□□□□□ -1.02
HPS4-201ENST00000336873 DLEC1Q9Y238 1755 aa8.67□□□□□ -1.02
HPS4-201ENST00000336873 MYH1P12882 1939 aa8.66□□□□□ -1.02
HPS4-201ENST00000336873 CITO14578 2027 aa8.66□□□□□ -1.02
HPS4-201ENST00000336873 A0A1B0GUA9 196 aa8.66□□□□□ -1.02
HPS4-201ENST00000336873 CDH16O75309 829 aa8.66□□□□□ -1.02
HPS4-201ENST00000336873 RARGP13631 454 aa8.66□□□□□ -1.02
HPS4-201ENST00000336873 BACE1P56817 501 aa8.66□□□□□ -1.02
HPS4-201ENST00000336873 CRADDP78560 199 aa8.66□□□□□ -1.02
HPS4-201ENST00000336873 MMRN1Q13201 1228 aa8.66□□□□□ -1.02
HPS4-201ENST00000336873 SPARCL1Q14515 664 aa8.66□□□□□ -1.02
HPS4-201ENST00000336873 EFTUD2Q15029 972 aaKnown RBP eCLIP8.66□□□□□ -1.02
HPS4-201ENST00000336873 SGSM1Q2NKQ1 1148 aa8.66□□□□□ -1.02
HPS4-201ENST00000336873 HYIQ5T013 277 aa8.66□□□□□ -1.02
HPS4-201ENST00000336873 DUPD1Q68J44 220 aa8.66□□□□□ -1.02
HPS4-201ENST00000336873 SCARA3Q6AZY7 606 aa8.66□□□□□ -1.02
HPS4-201ENST00000336873 CYP4X1Q8N118 509 aa8.66□□□□□ -1.02
HPS4-201ENST00000336873 FEZF2Q8TBJ5 459 aa8.66□□□□□ -1.02
HPS4-201ENST00000336873 DCPSQ96C86 337 aaKnown RBP8.66□□□□□ -1.02
HPS4-201ENST00000336873 FAM111AQ96PZ2 611 aa8.66□□□□□ -1.02
HPS4-201ENST00000336873 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.66□□□□□ -1.02
HPS4-201ENST00000336873 ARMCX1Q9P291 453 aa8.66□□□□□ -1.02
HPS4-201ENST00000336873 TPX2Q9ULW0 747 aaKnown RBP8.66□□□□□ -1.02
HPS4-201ENST00000336873 ADGRA3Q8IWK6 1321 aa8.66□□□□□ -1.02
HPS4-201ENST00000336873 A0A1W2PPM1 405 aa8.66□□□□□ -1.02
HPS4-201ENST00000336873 ONECUT3O60422 494 aaPredicted RBP8.66□□□□□ -1.02
HPS4-201ENST00000336873 PPFIA2O75334 1257 aa8.66□□□□□ -1.02
HPS4-201ENST00000336873 AGTP01019 485 aa8.66□□□□□ -1.02
HPS4-201ENST00000336873 NCF2P19878 526 aaPredicted RBP8.66□□□□□ -1.02
HPS4-201ENST00000336873 RFC1P35251 1148 aaPredicted RBP8.66□□□□□ -1.02
HPS4-201ENST00000336873 CTCFP49711 727 aaPredicted RBP8.66□□□□□ -1.02
HPS4-201ENST00000336873 C15orf59Q2T9L4 293 aaPredicted RBP8.66□□□□□ -1.02
HPS4-201ENST00000336873 SPDYE2Q495Y8 402 aa8.66□□□□□ -1.02
HPS4-201ENST00000336873 EFCAB12Q6NXP0 572 aa8.66□□□□□ -1.02
HPS4-201ENST00000336873 CES3Q6UWW8 571 aa8.66□□□□□ -1.02
HPS4-201ENST00000336873 SPATS2Q86XZ4 545 aaKnown RBP8.66□□□□□ -1.02
HPS4-201ENST00000336873 C12orf29Q8N999 325 aa8.66□□□□□ -1.02
HPS4-201ENST00000336873 YIPF3Q9GZM5 350 aa8.66□□□□□ -1.02
HPS4-201ENST00000336873 NOD2Q9HC29 1040 aa8.66□□□□□ -1.02
HPS4-201ENST00000336873 HOXC10Q9NYD6 342 aa8.66□□□□□ -1.02
HPS4-201ENST00000336873 DONSONQ9NYP3 566 aa8.66□□□□□ -1.02
HPS4-201ENST00000336873 MYH3P11055 1940 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms