RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 KCNA2P16389 499 aa13.03□□□□□ -0.32
VPS33B-201ENST00000333371 PTPRAP18433 802 aa13.03□□□□□ -0.32
VPS33B-201ENST00000333371 GARTP22102 1010 aa13.03□□□□□ -0.32
VPS33B-201ENST00000333371 RPA3P35244 121 aaPredicted RBP13.03□□□□□ -0.32
VPS33B-201ENST00000333371 CAV1Q03135 178 aa13.03□□□□□ -0.32
VPS33B-201ENST00000333371 STRN3Q13033 797 aa13.03□□□□□ -0.32
VPS33B-201ENST00000333371 EFTUD2Q15029 972 aaKnown RBP eCLIP13.03□□□□□ -0.328e-9■■■■■ 34.3
VPS33B-201ENST00000333371 LIN9Q5TKA1 542 aa13.03□□□□□ -0.32
VPS33B-201ENST00000333371 ENOSF1Q7L5Y1 443 aa13.03□□□□□ -0.32
VPS33B-201ENST00000333371 TRABD2AQ86V40 505 aa13.03□□□□□ -0.32
VPS33B-201ENST00000333371 UTP4Q969X6 686 aaKnown RBP13.03□□□□□ -0.32
VPS33B-201ENST00000333371 L3MBTL3Q96JM7 780 aaPredicted RBP13.03□□□□□ -0.32
VPS33B-201ENST00000333371 FAM81BQ96LP2 452 aa13.03□□□□□ -0.32
VPS33B-201ENST00000333371 TMEM121Q9BTD3 319 aa13.03□□□□□ -0.32
VPS33B-201ENST00000333371 TARS2Q9BW92 718 aaKnown RBP13.03□□□□□ -0.32
VPS33B-201ENST00000333371 VPS37BQ9H9H4 285 aa13.03□□□□□ -0.32
VPS33B-201ENST00000333371 ETNK1Q9HBU6 452 aa13.03□□□□□ -0.32
VPS33B-201ENST00000333371 PDLIM7Q9NR12 457 aa13.03□□□□□ -0.32
VPS33B-201ENST00000333371 ARHGEF3Q9NR81 526 aa13.03□□□□□ -0.32
VPS33B-201ENST00000333371 LRRIQ4A6NIV6 560 aa13.02□□□□□ -0.32
VPS33B-201ENST00000333371 EIF4E1BA6NMX2 242 aaKnown RBP13.02□□□□□ -0.32
VPS33B-201ENST00000333371 KRT15P19012 456 aa13.02□□□□□ -0.32
VPS33B-201ENST00000333371 TARSP26639 723 aaKnown RBP13.02□□□□□ -0.32
VPS33B-201ENST00000333371 MSH2P43246 934 aa13.02□□□□□ -0.32
VPS33B-201ENST00000333371 RIPK1Q13546 671 aa13.02□□□□□ -0.32
VPS33B-201ENST00000333371 STAT4Q14765 748 aa13.02□□□□□ -0.32
VPS33B-201ENST00000333371 SLC1A5Q15758 541 aa13.02□□□□□ -0.32
VPS33B-201ENST00000333371 SNRNP48Q6IEG0 339 aaKnown RBP13.02□□□□□ -0.32
VPS33B-201ENST00000333371 PLEKHA7Q6IQ23 1121 aa13.02□□□□□ -0.32
VPS33B-201ENST00000333371 ASRGL1Q7L266 308 aa13.02□□□□□ -0.32
VPS33B-201ENST00000333371 VSIG10LQ86VR7 867 aa13.02□□□□□ -0.32
VPS33B-201ENST00000333371 ZBED8Q8IZ13 594 aa13.02□□□□□ -0.32
VPS33B-201ENST00000333371 ZCCHC9Q8N567 271 aaKnown RBP13.02□□□□□ -0.32
VPS33B-201ENST00000333371 KCNV2Q8TDN2 545 aa13.02□□□□□ -0.32
VPS33B-201ENST00000333371 ASAP3Q8TDY4 903 aa13.02□□□□□ -0.32
VPS33B-201ENST00000333371 ERP27Q96DN0 273 aa13.02□□□□□ -0.32
VPS33B-201ENST00000333371 MCEEQ96PE7 176 aa13.02□□□□□ -0.32
VPS33B-201ENST00000333371 TRABDQ9H4I3 376 aa13.02□□□□□ -0.32
VPS33B-201ENST00000333371 RBAKQ9NYW8 714 aaPredicted RBP13.02□□□□□ -0.32
VPS33B-201ENST00000333371 ASMTLO95671 621 aa13.02□□□□□ -0.33
VPS33B-201ENST00000333371 DYNLT1P63172 113 aa13.02□□□□□ -0.33
VPS33B-201ENST00000333371 PSMD6Q15008 389 aa13.02□□□□□ -0.33
VPS33B-201ENST00000333371 CYP4A22Q5TCH4 519 aa13.02□□□□□ -0.33
VPS33B-201ENST00000333371 TMEM130Q8N3G9 435 aa13.02□□□□□ -0.33
VPS33B-201ENST00000333371 EXD1Q8NHP7 514 aa13.02□□□□□ -0.33
VPS33B-201ENST00000333371 FEZF2Q8TBJ5 459 aa13.02□□□□□ -0.33
VPS33B-201ENST00000333371 IFT74Q96LB3 600 aa13.02□□□□□ -0.33
VPS33B-201ENST00000333371 SLITRK1Q96PX8 696 aa13.02□□□□□ -0.33
VPS33B-201ENST00000333371 EBF2Q9HAK2 575 aa13.02□□□□□ -0.33
VPS33B-201ENST00000333371 DNALI1O14645 258 aaPredicted RBP13.01□□□□□ -0.33
VPS33B-201ENST00000333371 ZC3H11AO75152 810 aaKnown RBP eCLIP13.01□□□□□ -0.33
VPS33B-201ENST00000333371 DGAT1O75907 488 aa13.01□□□□□ -0.33
VPS33B-201ENST00000333371 CST3P01034 146 aaPredicted RBP13.01□□□□□ -0.33
VPS33B-201ENST00000333371 BRD2P25440 801 aaKnown RBP13.01□□□□□ -0.33
VPS33B-201ENST00000333371 ACTR2P61160 394 aa13.01□□□□□ -0.33
VPS33B-201ENST00000333371 PLCB3Q01970 1234 aa13.01□□□□□ -0.33
VPS33B-201ENST00000333371 NAA25Q14CX7 972 aa13.01□□□□□ -0.33
VPS33B-201ENST00000333371 WDR72Q3MJ13 1102 aa13.01□□□□□ -0.33
VPS33B-201ENST00000333371 ZNF677Q86XU0 584 aa13.01□□□□□ -0.33
VPS33B-201ENST00000333371 TRPM4Q8TD43 1214 aa13.01□□□□□ -0.33
VPS33B-201ENST00000333371 ZNF606Q8WXB4 792 aa13.01□□□□□ -0.33
VPS33B-201ENST00000333371 TRIM11Q96F44 468 aa13.01□□□□□ -0.33
VPS33B-201ENST00000333371 CCDC77Q9BR77 488 aa13.01□□□□□ -0.33
VPS33B-201ENST00000333371 GGA3Q9NZ52 723 aa13.01□□□□□ -0.33
VPS33B-201ENST00000333371 FBXO40Q9UH90 709 aa13.01□□□□□ -0.33
VPS33B-201ENST00000333371 HAO1Q9UJM8 370 aa13.01□□□□□ -0.33
VPS33B-201ENST00000333371 PHTF1Q9UMS5 762 aa13.01□□□□□ -0.33
VPS33B-201ENST00000333371 CHKBQ9Y259 395 aa13.01□□□□□ -0.33
VPS33B-201ENST00000333371 C15orf41Q9Y2V0 281 aa13.01□□□□□ -0.33
VPS33B-201ENST00000333371 PARP14Q460N5 1801 aa13.01□□□□□ -0.33
VPS33B-201ENST00000333371 PHIPQ8WWQ0 1821 aa13.01□□□□□ -0.33
VPS33B-201ENST00000333371 WDR91A4D1P6 747 aa13.01□□□□□ -0.33
VPS33B-201ENST00000333371 SKAP2O75563 359 aaPredicted RBP13.01□□□□□ -0.33
VPS33B-201ENST00000333371 ITGBL1O95965 494 aaPredicted RBP13.01□□□□□ -0.33
VPS33B-201ENST00000333371 ALADP13716 330 aa13.01□□□□□ -0.33
VPS33B-201ENST00000333371 IL9RQ01113 521 aa13.01□□□□□ -0.33
VPS33B-201ENST00000333371 SP2Q02086 613 aa13.01□□□□□ -0.33
VPS33B-201ENST00000333371 FSTL1Q12841 308 aa13.01□□□□□ -0.33
VPS33B-201ENST00000333371 SMTNL2Q2TAL5 461 aa13.01□□□□□ -0.33
VPS33B-201ENST00000333371 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.01□□□□□ -0.33
VPS33B-201ENST00000333371 ANKRD35Q8N283 1001 aa13.01□□□□□ -0.33
VPS33B-201ENST00000333371 ZNF112Q9UJU3 913 aa13.01□□□□□ -0.33
VPS33B-201ENST00000333371 PEX10O60683 326 aa13□□□□□ -0.33
VPS33B-201ENST00000333371 ATP4AP20648 1035 aa13□□□□□ -0.33
VPS33B-201ENST00000333371 CA4P22748 312 aa13□□□□□ -0.33
VPS33B-201ENST00000333371 CCND2P30279 289 aa13□□□□□ -0.33
VPS33B-201ENST00000333371 TNFSF9P41273 254 aa13□□□□□ -0.33
VPS33B-201ENST00000333371 POLGP54098 1239 aaPredicted RBP13□□□□□ -0.33
VPS33B-201ENST00000333371 NRLP54845 237 aa13□□□□□ -0.33
VPS33B-201ENST00000333371 PRKG1Q13976 671 aa13□□□□□ -0.33
VPS33B-201ENST00000333371 EMC2Q15006 297 aa13□□□□□ -0.33
VPS33B-201ENST00000333371 ZNF449Q6P9G9 518 aa13□□□□□ -0.33
VPS33B-201ENST00000333371 DENND1AQ8TEH3 1009 aa13□□□□□ -0.33
VPS33B-201ENST00000333371 ATP6V0A1Q93050 837 aa13□□□□□ -0.33
VPS33B-201ENST00000333371 ZNF570Q96NI8 536 aa13□□□□□ -0.33
VPS33B-201ENST00000333371 KLF6Q99612 283 aaPredicted RBP13□□□□□ -0.33
VPS33B-201ENST00000333371 SENP7Q9BQF6 1050 aa13□□□□□ -0.33
VPS33B-201ENST00000333371 MAK16Q9BXY0 300 aaKnown RBP13□□□□□ -0.33
VPS33B-201ENST00000333371 MRPL47Q9HD33 250 aaKnown RBP13□□□□□ -0.33
VPS33B-201ENST00000333371 JPH1Q9HDC5 661 aaPredicted RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms