RNA–Protein interactions for RNA: ENST00000331433.4

CLCNKA-201, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,475 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-201ENST00000331433 PPP1R2P3Q6NXS1 205 aa15.75■□□□□ 0.11
CLCNKA-201ENST00000331433 DCUN1D2Q6PH85 259 aa15.75■□□□□ 0.11
CLCNKA-201ENST00000331433 RHBDF2Q6PJF5 856 aa15.75■□□□□ 0.11
CLCNKA-201ENST00000331433 ACSF2Q96CM8 615 aaPredicted RBP15.75■□□□□ 0.11
CLCNKA-201ENST00000331433 ANKRD36BP1Q96IX9 119 aa15.75■□□□□ 0.11
CLCNKA-201ENST00000331433 JPH2Q9BR39 696 aaPredicted RBP15.75■□□□□ 0.11
CLCNKA-201ENST00000331433 IVNS1ABPQ9Y6Y0 642 aa15.75■□□□□ 0.11
CLCNKA-201ENST00000331433 C22orf31O95567 290 aa15.74■□□□□ 0.11
CLCNKA-201ENST00000331433 LSM8O95777 96 aaKnown RBP15.74■□□□□ 0.11
CLCNKA-201ENST00000331433 FAM107AO95990 144 aa15.74■□□□□ 0.11
CLCNKA-201ENST00000331433 ATF2P15336 505 aa15.74■□□□□ 0.11
CLCNKA-201ENST00000331433 ITIH2P19823 946 aa15.74■□□□□ 0.11
CLCNKA-201ENST00000331433 GJA5P36382 358 aa15.74■□□□□ 0.11
CLCNKA-201ENST00000331433 NFX1Q12986 1120 aaKnown RBP15.74■□□□□ 0.11
CLCNKA-201ENST00000331433 TXNRD3NBQ6F5E7 133 aa15.74■□□□□ 0.11
CLCNKA-201ENST00000331433 ARMCX2Q7L311 632 aa15.74■□□□□ 0.11
CLCNKA-201ENST00000331433 FASTKD5Q7L8L6 764 aaKnown RBP15.74■□□□□ 0.11
CLCNKA-201ENST00000331433 RAPGEF5Q92565 580 aa15.74■□□□□ 0.11
CLCNKA-201ENST00000331433 SCLT1Q96NL6 688 aa15.74■□□□□ 0.11
CLCNKA-201ENST00000331433 MROH8Q9H579 483 aa15.74■□□□□ 0.11
CLCNKA-201ENST00000331433 GPR25O00155 361 aa15.74■□□□□ 0.11
CLCNKA-201ENST00000331433 TRAPPC3O43617 180 aa15.74■□□□□ 0.11
CLCNKA-201ENST00000331433 B4GALT4O60513 344 aa15.74■□□□□ 0.11
CLCNKA-201ENST00000331433 NFICP08651 508 aa15.74■□□□□ 0.11
CLCNKA-201ENST00000331433 CD19P15391 556 aa15.74■□□□□ 0.11
CLCNKA-201ENST00000331433 ATF7P17544 494 aaPredicted RBP15.74■□□□□ 0.11
CLCNKA-201ENST00000331433 SLC26A2P50443 739 aa15.74■□□□□ 0.11
CLCNKA-201ENST00000331433 CDH8P55286 799 aa15.74■□□□□ 0.11
CLCNKA-201ENST00000331433 CCNG2Q16589 344 aa15.74■□□□□ 0.11
CLCNKA-201ENST00000331433 C9orf131Q5VYM1 1079 aa15.74■□□□□ 0.11
CLCNKA-201ENST00000331433 DENND1BQ6P3S1 775 aa15.74■□□□□ 0.11
CLCNKA-201ENST00000331433 FAM129AQ9BZQ8 928 aa15.74■□□□□ 0.11
CLCNKA-201ENST00000331433 IFT122Q9HBG6 1241 aa15.74■□□□□ 0.11
CLCNKA-201ENST00000331433 TJP2Q9UDY2 1190 aa15.74■□□□□ 0.11
CLCNKA-201ENST00000331433 SIX4Q9UIU6 781 aa15.74■□□□□ 0.11
CLCNKA-201ENST00000331433 NEU2Q9Y3R4 380 aa15.74■□□□□ 0.11
CLCNKA-201ENST00000331433 GMNCA6NCL1 334 aa15.73■□□□□ 0.11
CLCNKA-201ENST00000331433 KRT1P04264 644 aa15.73■□□□□ 0.11
CLCNKA-201ENST00000331433 INSRRP14616 1297 aa15.73■□□□□ 0.11
CLCNKA-201ENST00000331433 WDR72Q3MJ13 1102 aa15.73■□□□□ 0.11
CLCNKA-201ENST00000331433 MFSD7Q6UXD7 560 aa15.73■□□□□ 0.11
CLCNKA-201ENST00000331433 SYDE1Q6ZW31 735 aaPredicted RBP15.73■□□□□ 0.11
CLCNKA-201ENST00000331433 ERICH1Q86X53 443 aa15.73■□□□□ 0.11
CLCNKA-201ENST00000331433 SLITRK1Q96PX8 696 aa15.73■□□□□ 0.11
CLCNKA-201ENST00000331433 SELENOSQ9BQE4 189 aa15.73■□□□□ 0.11
CLCNKA-201ENST00000331433 RPF1Q9H9Y2 349 aaKnown RBP15.73■□□□□ 0.11
CLCNKA-201ENST00000331433 ERAP1Q9NZ08 941 aa15.73■□□□□ 0.11
CLCNKA-201ENST00000331433 RASGRF2O14827 1237 aa15.73■□□□□ 0.11
CLCNKA-201ENST00000331433 MEFVO15553 781 aaPredicted RBP15.73■□□□□ 0.11
CLCNKA-201ENST00000331433 LACTBP83111 547 aaPredicted RBP15.73■□□□□ 0.11
CLCNKA-201ENST00000331433 ARHGAP1Q07960 439 aa15.73■□□□□ 0.11
CLCNKA-201ENST00000331433 LONRF1Q17RB8 773 aa15.73■□□□□ 0.11
CLCNKA-201ENST00000331433 C6orf118Q5T5N4 469 aa15.73■□□□□ 0.11
CLCNKA-201ENST00000331433 CHADLQ6NUI6 762 aa15.73■□□□□ 0.11
CLCNKA-201ENST00000331433 ZNF365Q70YC5 407 aa15.73■□□□□ 0.11
CLCNKA-201ENST00000331433 B4GALNT4Q76KP1 1039 aa15.73■□□□□ 0.11
CLCNKA-201ENST00000331433 C1orf127Q8N9H9 656 aa15.73■□□□□ 0.11
CLCNKA-201ENST00000331433 ADAM7Q9H2U9 754 aa15.73■□□□□ 0.11
CLCNKA-201ENST00000331433 HOMER3Q9NSC5 361 aa15.73■□□□□ 0.11
CLCNKA-201ENST00000331433 ANAPC5Q9UJX4 755 aa15.73■□□□□ 0.11
CLCNKA-201ENST00000331433 TNFSF13BQ9Y275 285 aa15.73■□□□□ 0.11
CLCNKA-201ENST00000331433 A0A087WZ62 844 aa15.72■□□□□ 0.11
CLCNKA-201ENST00000331433 SRRM3A6NNA2 597 aaPredicted RBP15.72■□□□□ 0.11
CLCNKA-201ENST00000331433 GOLGA8SH3BPF8 625 aa15.72■□□□□ 0.11
CLCNKA-201ENST00000331433 PAEPP09466 180 aa15.72■□□□□ 0.11
CLCNKA-201ENST00000331433 AUHQ13825 339 aaKnown RBP15.72■□□□□ 0.11
CLCNKA-201ENST00000331433 CCDC38Q502W7 563 aa15.72■□□□□ 0.11
CLCNKA-201ENST00000331433 PPP1R15BQ5SWA1 713 aa15.72■□□□□ 0.11
CLCNKA-201ENST00000331433 TRMT10CQ7L0Y3 403 aaKnown RBP15.72■□□□□ 0.11
CLCNKA-201ENST00000331433 CPB2Q96IY4 423 aa15.72■□□□□ 0.11
CLCNKA-201ENST00000331433 FDXACB1Q9BRP7 624 aaPredicted RBP15.72■□□□□ 0.11
CLCNKA-201ENST00000331433 TRAIPQ9BWF2 469 aa15.72■□□□□ 0.11
CLCNKA-201ENST00000331433 RASSF4Q9H2L5 321 aa15.72■□□□□ 0.11
CLCNKA-201ENST00000331433 CNOT10Q9H9A5 744 aaKnown RBP15.72■□□□□ 0.11
CLCNKA-201ENST00000331433 CYTH4Q9UIA0 394 aa15.72■□□□□ 0.11
CLCNKA-201ENST00000331433 PCDHGC3Q9UN70 934 aa15.72■□□□□ 0.11
CLCNKA-201ENST00000331433 LACTBL1A8MY62 500 aa15.72■□□□□ 0.11
CLCNKA-201ENST00000331433 ITGBL1O95965 494 aaPredicted RBP15.72■□□□□ 0.11
CLCNKA-201ENST00000331433 LGALS2P05162 132 aa15.72■□□□□ 0.11
CLCNKA-201ENST00000331433 ZNF286BP0CG31 522 aa15.72■□□□□ 0.11
CLCNKA-201ENST00000331433 CHN1P15882 459 aa15.72■□□□□ 0.11
CLCNKA-201ENST00000331433 EIF4BP23588 611 aaKnown RBP15.72■□□□□ 0.11
CLCNKA-201ENST00000331433 MMP13P45452 471 aa15.72■□□□□ 0.11
CLCNKA-201ENST00000331433 KYNUQ16719 465 aa15.72■□□□□ 0.11
CLCNKA-201ENST00000331433 QPCTQ16769 361 aa15.72■□□□□ 0.11
CLCNKA-201ENST00000331433 PTPN20Q4JDL3 420 aa15.72■□□□□ 0.11
CLCNKA-201ENST00000331433 GSTA5Q7RTV2 222 aa15.72■□□□□ 0.11
CLCNKA-201ENST00000331433 GLIS1Q8NBF1 620 aa15.72■□□□□ 0.11
CLCNKA-201ENST00000331433 TMEM109Q9BVC6 243 aa15.72■□□□□ 0.11
CLCNKA-201ENST00000331433 ZNF518BQ9C0D4 1074 aa15.72■□□□□ 0.11
CLCNKA-201ENST00000331433 SDCBP2Q9H190 292 aa15.72■□□□□ 0.11
CLCNKA-201ENST00000331433 SMYD3Q9H7B4 428 aa15.72■□□□□ 0.11
CLCNKA-201ENST00000331433 HMGXB4Q9UGU5 601 aa15.72■□□□□ 0.11
CLCNKA-201ENST00000331433 DNPEPQ9ULA0 475 aa15.72■□□□□ 0.11
CLCNKA-201ENST00000331433 CEP83Q9Y592 693 aa15.72■□□□□ 0.11
CLCNKA-201ENST00000331433 ASB14A6NK59 587 aa15.71■□□□□ 0.11
CLCNKA-201ENST00000331433 AGTP01019 485 aa15.71■□□□□ 0.11
CLCNKA-201ENST00000331433 VTNP04004 478 aa15.71■□□□□ 0.11
CLCNKA-201ENST00000331433 STAG3L1P0CL83 205 aa15.71■□□□□ 0.11
CLCNKA-201ENST00000331433 CDH5P33151 784 aaPredicted RBP15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms