RNA–Protein interactions for RNA: ENST00000329553.2

RIPPLY3-201, Transcript of ripply transcriptional repressor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPPLY3, Length 2,235 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-201ENST00000329553 SESTD1Q86VW0 696 aa21.56■■□□□ 1.04
RIPPLY3-201ENST00000329553 WHAMMQ8TF30 809 aa21.56■■□□□ 1.04
RIPPLY3-201ENST00000329553 C18orf25Q96B23 403 aaPredicted RBP21.56■■□□□ 1.04
RIPPLY3-201ENST00000329553 CWC15Q9P013 229 aaKnown RBP21.56■■□□□ 1.04
RIPPLY3-201ENST00000329553 KLK14Q9P0G3 267 aa21.56■■□□□ 1.04
RIPPLY3-201ENST00000329553 DDX20Q9UHI6 824 aaKnown RBP21.56■■□□□ 1.04
RIPPLY3-201ENST00000329553 DMGDHQ9UI17 866 aaKnown RBP21.56■■□□□ 1.04
RIPPLY3-201ENST00000329553 CEP104O60308 925 aa21.56■■□□□ 1.04
RIPPLY3-201ENST00000329553 STAU1O95793 577 aaKnown RBP21.56■■□□□ 1.04
RIPPLY3-201ENST00000329553 CHRNA1P02708 482 aa21.56■■□□□ 1.04
RIPPLY3-201ENST00000329553 RAD23BP54727 409 aa21.56■■□□□ 1.04
RIPPLY3-201ENST00000329553 PHF13Q86YI8 300 aaPredicted RBP21.56■■□□□ 1.04
RIPPLY3-201ENST00000329553 GDAP1L1Q96MZ0 367 aa21.56■■□□□ 1.04
RIPPLY3-201ENST00000329553 C11orf70Q9BRQ4 267 aa21.56■■□□□ 1.04
RIPPLY3-201ENST00000329553 CYP3A43Q9HB55 503 aa21.56■■□□□ 1.04
RIPPLY3-201ENST00000329553 AVENQ9NQS1 362 aaPredicted RBP21.56■■□□□ 1.04
RIPPLY3-201ENST00000329553 TUBGCP4Q9UGJ1 667 aa21.56■■□□□ 1.04
RIPPLY3-201ENST00000329553 RALGAPA2Q2PPJ7 1873 aa21.56■■□□□ 1.04
RIPPLY3-201ENST00000329553 CTSHP09668 335 aa21.55■■□□□ 1.04
RIPPLY3-201ENST00000329553 MYBL1P10243 752 aa21.55■■□□□ 1.04
RIPPLY3-201ENST00000329553 P4HA1P13674 534 aa21.55■■□□□ 1.04
RIPPLY3-201ENST00000329553 GGCXP38435 758 aa21.55■■□□□ 1.04
RIPPLY3-201ENST00000329553 HTRA3P83110 453 aa21.55■■□□□ 1.04
RIPPLY3-201ENST00000329553 PCSK9Q8NBP7 692 aaKnown RBP21.55■■□□□ 1.04
RIPPLY3-201ENST00000329553 SMG8Q8ND04 991 aaKnown RBP21.55■■□□□ 1.04
RIPPLY3-201ENST00000329553 TRIM11Q96F44 468 aa21.55■■□□□ 1.04
RIPPLY3-201ENST00000329553 TWNKQ96RR1 684 aa21.55■■□□□ 1.04
RIPPLY3-201ENST00000329553 ADAM22Q9P0K1 906 aa21.55■■□□□ 1.04
RIPPLY3-201ENST00000329553 PARP2Q9UGN5 583 aa21.55■■□□□ 1.04
RIPPLY3-201ENST00000329553 IPPQ9Y573 584 aa21.55■■□□□ 1.04
RIPPLY3-201ENST00000329553 PPEF2O14830 753 aa21.55■■□□□ 1.04
RIPPLY3-201ENST00000329553 COMTP21964 271 aa21.55■■□□□ 1.04
RIPPLY3-201ENST00000329553 PTP4A2Q12974 167 aa21.55■■□□□ 1.04
RIPPLY3-201ENST00000329553 ORC1Q13415 861 aa21.55■■□□□ 1.04
RIPPLY3-201ENST00000329553 RBM12Q9NTZ6 932 aaKnown RBP21.55■■□□□ 1.04
RIPPLY3-201ENST00000329553 HMGXB4Q9UGU5 601 aa21.55■■□□□ 1.04
RIPPLY3-201ENST00000329553 SCN1AP35498 2009 aa21.54■■□□□ 1.04
RIPPLY3-201ENST00000329553 CILPO75339 1184 aa21.54■■□□□ 1.04
RIPPLY3-201ENST00000329553 TWF2Q6IBS0 349 aaKnown RBP21.54■■□□□ 1.04
RIPPLY3-201ENST00000329553 MMS22LQ6ZRQ5 1243 aa21.54■■□□□ 1.04
RIPPLY3-201ENST00000329553 RPAINQ86UA6 219 aa21.54■■□□□ 1.04
RIPPLY3-201ENST00000329553 CPNE8Q86YQ8 564 aa21.54■■□□□ 1.04
RIPPLY3-201ENST00000329553 BEST2Q8NFU1 509 aa21.54■■□□□ 1.04
RIPPLY3-201ENST00000329553 PXYLP1Q8TE99 480 aa21.54■■□□□ 1.04
RIPPLY3-201ENST00000329553 VCPIP1Q96JH7 1222 aa21.54■■□□□ 1.04
RIPPLY3-201ENST00000329553 RPS6KC1Q96S38 1066 aa21.54■■□□□ 1.04
RIPPLY3-201ENST00000329553 SENP6Q9GZR1 1112 aaPredicted RBP21.54■■□□□ 1.04
RIPPLY3-201ENST00000329553 ELOVL4Q9GZR5 314 aa21.54■■□□□ 1.04
RIPPLY3-201ENST00000329553 PCDHGC3Q9UN70 934 aa21.54■■□□□ 1.04
RIPPLY3-201ENST00000329553 ST3GAL5Q9UNP4 418 aa21.54■■□□□ 1.04
RIPPLY3-201ENST00000329553 A0A0U1RQG5 324 aaPredicted RBP21.53■■□□□ 1.04
RIPPLY3-201ENST00000329553 SMIM28A0A1B0GU29 152 aa21.53■■□□□ 1.04
RIPPLY3-201ENST00000329553 IVLP07476 585 aa21.53■■□□□ 1.04
RIPPLY3-201ENST00000329553 CD19P15391 556 aa21.53■■□□□ 1.04
RIPPLY3-201ENST00000329553 PTGISQ16647 500 aa21.53■■□□□ 1.04
RIPPLY3-201ENST00000329553 WDTC1Q8N5D0 677 aa21.53■■□□□ 1.04
RIPPLY3-201ENST00000329553 SLC4A11Q8NBS3 891 aa21.53■■□□□ 1.04
RIPPLY3-201ENST00000329553 ARRDC4Q8NCT1 418 aa21.53■■□□□ 1.04
RIPPLY3-201ENST00000329553 ACTRT1Q8TDG2 376 aa21.53■■□□□ 1.04
RIPPLY3-201ENST00000329553 THSD7BQ9C0I4 1608 aa21.53■■□□□ 1.04
RIPPLY3-201ENST00000329553 PAEPP09466 180 aa21.53■■□□□ 1.04
RIPPLY3-201ENST00000329553 TNFRSF8P28908 595 aa21.53■■□□□ 1.04
RIPPLY3-201ENST00000329553 TNNC1P63316 161 aa21.53■■□□□ 1.04
RIPPLY3-201ENST00000329553 MGAT3Q09327 533 aa21.53■■□□□ 1.04
RIPPLY3-201ENST00000329553 MYO1EQ12965 1108 aa21.53■■□□□ 1.04
RIPPLY3-201ENST00000329553 NFX1Q12986 1120 aaKnown RBP21.53■■□□□ 1.04
RIPPLY3-201ENST00000329553 XKR4Q5GH76 650 aa21.53■■□□□ 1.04
RIPPLY3-201ENST00000329553 DCAF12L1Q5VU92 463 aa21.53■■□□□ 1.04
RIPPLY3-201ENST00000329553 USP38Q8NB14 1042 aa21.53■■□□□ 1.04
RIPPLY3-201ENST00000329553 RIN2Q8WYP3 895 aaPredicted RBP21.53■■□□□ 1.04
RIPPLY3-201ENST00000329553 TRIM7Q9C029 511 aa21.53■■□□□ 1.04
RIPPLY3-201ENST00000329553 MMP8P22894 467 aa21.52■■□□□ 1.04
RIPPLY3-201ENST00000329553 C1QBPQ07021 282 aaKnown RBP21.52■■□□□ 1.04
RIPPLY3-201ENST00000329553 LIN9Q5TKA1 542 aa21.52■■□□□ 1.04
RIPPLY3-201ENST00000329553 RNF180Q86T96 592 aa21.52■■□□□ 1.04
RIPPLY3-201ENST00000329553 RASGEF1CQ8N431 466 aa21.52■■□□□ 1.04
RIPPLY3-201ENST00000329553 GOLGA6L1Q8N7Z2 621 aa21.52■■□□□ 1.04
RIPPLY3-201ENST00000329553 ZNF784Q8NCA9 323 aaPredicted RBP21.52■■□□□ 1.04
RIPPLY3-201ENST00000329553 TMEM35BQ8NCS4 154 aa21.52■■□□□ 1.04
RIPPLY3-201ENST00000329553 C1orf131Q8NDD1 294 aaKnown RBP21.52■■□□□ 1.04
RIPPLY3-201ENST00000329553 ALG3Q92685 438 aa21.52■■□□□ 1.04
RIPPLY3-201ENST00000329553 TMEM176AQ96HP8 235 aa21.52■■□□□ 1.04
RIPPLY3-201ENST00000329553 OSBPL7Q9BZF2 842 aa21.52■■□□□ 1.04
RIPPLY3-201ENST00000329553 STIM2Q9P246 746 aa21.52■■□□□ 1.04
RIPPLY3-201ENST00000329553 ANAPC7Q9UJX3 599 aa21.52■■□□□ 1.04
RIPPLY3-201ENST00000329553 UBQLN1Q9UMX0 589 aaKnown RBP21.52■■□□□ 1.04
RIPPLY3-201ENST00000329553 LSM8O95777 96 aaKnown RBP21.52■■□□□ 1.04
RIPPLY3-201ENST00000329553 KCNE1P15382 129 aa21.52■■□□□ 1.04
RIPPLY3-201ENST00000329553 THPOP40225 353 aa21.52■■□□□ 1.04
RIPPLY3-201ENST00000329553 ITGA7Q13683 1181 aa21.52■■□□□ 1.04
RIPPLY3-201ENST00000329553 GLE1Q53GS7 698 aaKnown RBP21.52■■□□□ 1.04
RIPPLY3-201ENST00000329553 PPP1R2P3Q6NXS1 205 aa21.52■■□□□ 1.04
RIPPLY3-201ENST00000329553 KRT35Q92764 455 aa21.52■■□□□ 1.04
RIPPLY3-201ENST00000329553 BRCA2P51587 3418 aa21.52■■□□□ 1.03
RIPPLY3-201ENST00000329553 GOLGA6BA6NDN3 693 aa21.51■■□□□ 1.03
RIPPLY3-201ENST00000329553 GNRH1P01148 92 aa21.51■■□□□ 1.03
RIPPLY3-201ENST00000329553 CDH5P33151 784 aaPredicted RBP21.51■■□□□ 1.03
RIPPLY3-201ENST00000329553 PTPN11Q06124 597 aaPredicted RBP21.51■■□□□ 1.03
RIPPLY3-201ENST00000329553 C9orf57Q5W0N0 161 aa21.51■■□□□ 1.03
RIPPLY3-201ENST00000329553 DENND1BQ6P3S1 775 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms