RNA–Protein interactions for RNA: ENST00000328495.9

CCDC144A-201, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 2

Gene CCDC144A, Length 3,375 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-201ENST00000328495 FAM109BQ6ICB4 259 aaPredicted RBP2.13□□□□□ -2.07
CCDC144A-201ENST00000328495 DNAJC10Q8IXB1 793 aa2.13□□□□□ -2.07
CCDC144A-201ENST00000328495 NUP133Q8WUM0 1156 aa2.13□□□□□ -2.07
CCDC144A-201ENST00000328495 ASB10Q8WXI3 467 aa2.13□□□□□ -2.07
CCDC144A-201ENST00000328495 BOD1Q96IK1 185 aa2.13□□□□□ -2.07
CCDC144A-201ENST00000328495 ZSWIM1Q9BR11 485 aa2.13□□□□□ -2.07
CCDC144A-201ENST00000328495 TUBD1Q9UJT1 453 aa2.13□□□□□ -2.07
CCDC144A-201ENST00000328495 CNTNAP1P78357 1384 aa2.13□□□□□ -2.07
CCDC144A-201ENST00000328495 PLEKHG2Q9H7P9 1386 aa2.13□□□□□ -2.07
CCDC144A-201ENST00000328495 SLIT1O75093 1534 aa2.13□□□□□ -2.07
CCDC144A-201ENST00000328495 KIDINS220Q9ULH0 1771 aa2.12□□□□□ -2.07
CCDC144A-201ENST00000328495 CDHR4A6H8M9 788 aa2.12□□□□□ -2.07
CCDC144A-201ENST00000328495 ENO4A6NNW6 628 aa2.12□□□□□ -2.07
CCDC144A-201ENST00000328495 KATNA1O75449 491 aa2.12□□□□□ -2.07
CCDC144A-201ENST00000328495 ELANEP08246 267 aa2.12□□□□□ -2.07
CCDC144A-201ENST00000328495 MTHFD1P11586 935 aaKnown RBP2.12□□□□□ -2.07
CCDC144A-201ENST00000328495 CKBP12277 381 aa2.12□□□□□ -2.07
CCDC144A-201ENST00000328495 BMP5P22003 454 aa2.12□□□□□ -2.07
CCDC144A-201ENST00000328495 CXADRP78310 365 aa2.12□□□□□ -2.07
CCDC144A-201ENST00000328495 HSD11B2P80365 405 aa2.12□□□□□ -2.07
CCDC144A-201ENST00000328495 KIF23Q02241 960 aaPredicted RBP2.12□□□□□ -2.07
CCDC144A-201ENST00000328495 EFCAB2Q5VUJ9 269 aa2.12□□□□□ -2.07
CCDC144A-201ENST00000328495 GADL1Q6ZQY3 521 aa2.12□□□□□ -2.07
CCDC144A-201ENST00000328495 SLC9A6Q92581 669 aa2.12□□□□□ -2.07
CCDC144A-201ENST00000328495 TEKT5Q96M29 485 aa2.12□□□□□ -2.07
CCDC144A-201ENST00000328495 MED15Q96RN5 788 aa2.12□□□□□ -2.07
CCDC144A-201ENST00000328495 CRAMP1Q96RY5 1269 aa2.12□□□□□ -2.07
CCDC144A-201ENST00000328495 PNKPQ96T60 521 aa2.12□□□□□ -2.07
CCDC144A-201ENST00000328495 TBCCD1Q9NVR7 557 aa2.12□□□□□ -2.07
CCDC144A-201ENST00000328495 CRB1P82279 1406 aa2.12□□□□□ -2.07
CCDC144A-201ENST00000328495 C9orf84Q5VXU9 1444 aa2.12□□□□□ -2.07
CCDC144A-201ENST00000328495 LRRC37A3O60309 1634 aa2.12□□□□□ -2.07
CCDC144A-201ENST00000328495 TCRBV7S2A1N4TA0A589 114 aa2.12□□□□□ -2.07
CCDC144A-201ENST00000328495 GABRDO14764 452 aa2.12□□□□□ -2.07
CCDC144A-201ENST00000328495 NUDT3O95989 172 aa2.12□□□□□ -2.07
CCDC144A-201ENST00000328495 EGR2P11161 476 aaPredicted RBP2.12□□□□□ -2.07
CCDC144A-201ENST00000328495 AFF2P51816 1311 aa2.12□□□□□ -2.07
CCDC144A-201ENST00000328495 NANOS3P60323 173 aaKnown RBP2.12□□□□□ -2.07
CCDC144A-201ENST00000328495 COL10A1Q03692 680 aa2.12□□□□□ -2.07
CCDC144A-201ENST00000328495 TARDBPQ13148 414 aaKnown RBP eCLIP2.12□□□□□ -2.07
CCDC144A-201ENST00000328495 MPP3Q13368 585 aa2.12□□□□□ -2.07
CCDC144A-201ENST00000328495 B3GNTL1Q67FW5 361 aaPredicted RBP2.12□□□□□ -2.07
CCDC144A-201ENST00000328495 COLGALT2Q8IYK4 626 aa2.12□□□□□ -2.07
CCDC144A-201ENST00000328495 TBC1D15Q8TC07 691 aa2.12□□□□□ -2.07
CCDC144A-201ENST00000328495 LINC00476Q8WZB0 136 aa2.12□□□□□ -2.07
CCDC144A-201ENST00000328495 PACSIN1Q9BY11 444 aa2.12□□□□□ -2.07
CCDC144A-201ENST00000328495 GSTO2Q9H4Y5 243 aa2.12□□□□□ -2.07
CCDC144A-201ENST00000328495 TMEM74BQ9NUR3 256 aa2.12□□□□□ -2.07
CCDC144A-201ENST00000328495 SYBUQ9NX95 663 aa2.12□□□□□ -2.07
CCDC144A-201ENST00000328495 NIPSNAP3AQ9UFN0 247 aaPredicted RBP2.12□□□□□ -2.07
CCDC144A-201ENST00000328495 USP25Q9UHP3 1055 aa2.12□□□□□ -2.07
CCDC144A-201ENST00000328495 ZNHIT2Q9UHR6 403 aa2.12□□□□□ -2.07
CCDC144A-201ENST00000328495 COL4A3BPQ9Y5P4 624 aa2.12□□□□□ -2.07
CCDC144A-201ENST00000328495 COL4A5P29400 1685 aa2.12□□□□□ -2.07
CCDC144A-201ENST00000328495 WRNQ14191 1432 aaPredicted RBP eCLIP2.12□□□□□ -2.07
CCDC144A-201ENST00000328495 GRM6O15303 877 aa2.12□□□□□ -2.07
CCDC144A-201ENST00000328495 HTRA2O43464 458 aaPredicted RBP2.12□□□□□ -2.07
CCDC144A-201ENST00000328495 CA12O43570 354 aa2.12□□□□□ -2.07
CCDC144A-201ENST00000328495 CCND1P24385 295 aa2.12□□□□□ -2.07
CCDC144A-201ENST00000328495 SEC24CP53992 1094 aa2.12□□□□□ -2.07
CCDC144A-201ENST00000328495 PTPN21Q16825 1174 aa2.12□□□□□ -2.07
CCDC144A-201ENST00000328495 PABPC1LQ4VXU2 614 aaKnown RBP2.12□□□□□ -2.07
CCDC144A-201ENST00000328495 STRIP1Q5VSL9 837 aa2.12□□□□□ -2.07
CCDC144A-201ENST00000328495 AOPEPQ8N6M6 819 aa2.12□□□□□ -2.07
CCDC144A-201ENST00000328495 RAB24Q969Q5 203 aa2.12□□□□□ -2.07
CCDC144A-201ENST00000328495 FUBP1Q96AE4 644 aaKnown RBP2.12□□□□□ -2.07
CCDC144A-201ENST00000328495 SLC13A1Q9BZW2 595 aa2.12□□□□□ -2.07
CCDC144A-201ENST00000328495 CCDC8Q9H0W5 538 aaPredicted RBP2.12□□□□□ -2.07
CCDC144A-201ENST00000328495 MAN1C1Q9NR34 630 aa2.12□□□□□ -2.07
CCDC144A-201ENST00000328495 DMTF1Q9Y222 760 aa2.12□□□□□ -2.07
CCDC144A-201ENST00000328495 SPEF1Q9Y4P9 236 aa2.12□□□□□ -2.07
CCDC144A-201ENST00000328495 PCDHA13Q9Y5I0 950 aa2.12□□□□□ -2.07
CCDC144A-201ENST00000328495 CFAP20Q9Y6A4 193 aaKnown RBP2.12□□□□□ -2.07
CCDC144A-201ENST00000328495 AQRO60306 1485 aaKnown RBP eCLIP2.11□□□□□ -2.07
CCDC144A-201ENST00000328495 CCDC154A6NI56 674 aa2.11□□□□□ -2.07
CCDC144A-201ENST00000328495 PCDHGA12O60330 932 aa2.11□□□□□ -2.07
CCDC144A-201ENST00000328495 CD1AP06126 327 aa2.11□□□□□ -2.07
CCDC144A-201ENST00000328495 ADRA1BP35368 520 aa2.11□□□□□ -2.07
CCDC144A-201ENST00000328495 ADKP55263 362 aaKnown RBP2.11□□□□□ -2.07
CCDC144A-201ENST00000328495 NOMO3P69849 1222 aa2.11□□□□□ -2.07
CCDC144A-201ENST00000328495 PCBP2Q15366 365 aaKnown RBP eCLIP2.11□□□□□ -2.07
CCDC144A-201ENST00000328495 UAP1L1Q3KQV9 507 aa2.11□□□□□ -2.07
CCDC144A-201ENST00000328495 NOMO2Q5JPE7 1267 aa2.11□□□□□ -2.07
CCDC144A-201ENST00000328495 SLC44A3Q8N4M1 653 aa2.11□□□□□ -2.07
CCDC144A-201ENST00000328495 GPR150Q8NGU9 434 aa2.11□□□□□ -2.07
CCDC144A-201ENST00000328495 IFI44Q8TCB0 444 aa2.11□□□□□ -2.07
CCDC144A-201ENST00000328495 MARS2Q96GW9 593 aaKnown RBP2.11□□□□□ -2.07
CCDC144A-201ENST00000328495 SMAD5Q99717 465 aaKnown RBP2.11□□□□□ -2.07
CCDC144A-201ENST00000328495 RIOX1Q9H6W3 641 aa2.11□□□□□ -2.07
CCDC144A-201ENST00000328495 PCDH12Q9NPG4 1184 aa2.11□□□□□ -2.07
CCDC144A-201ENST00000328495 CASS4Q9NQ75 786 aa2.11□□□□□ -2.07
CCDC144A-201ENST00000328495 CALCOCO1Q9P1Z2 691 aa2.11□□□□□ -2.07
CCDC144A-201ENST00000328495 IPPQ9Y573 584 aa2.11□□□□□ -2.07
CCDC144A-201ENST00000328495 PCDHGA9Q9Y5G4 932 aaKnown RBP2.11□□□□□ -2.07
CCDC144A-201ENST00000328495 PCDHGA8Q9Y5G5 932 aa2.11□□□□□ -2.07
CCDC144A-201ENST00000328495 PCDHGA7Q9Y5G6 932 aa2.11□□□□□ -2.07
CCDC144A-201ENST00000328495 PCDHGA6Q9Y5G7 932 aa2.11□□□□□ -2.07
CCDC144A-201ENST00000328495 PCDHGA3Q9Y5H0 932 aa2.11□□□□□ -2.07
CCDC144A-201ENST00000328495 MAST3O60307 1309 aa2.11□□□□□ -2.07
CCDC144A-201ENST00000328495 MYADML2A6NDP7 307 aa2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms