RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 DGKDQ16760 1214 aa8.04□□□□□ -1.12
IFT88-201ENST00000319980 SLC10A6Q3KNW5 377 aa8.04□□□□□ -1.12
IFT88-201ENST00000319980 ZFYVE27Q5T4F4 411 aa8.04□□□□□ -1.12
IFT88-201ENST00000319980 KIAA0319LQ8IZA0 1049 aa8.04□□□□□ -1.12
IFT88-201ENST00000319980 WDTC1Q8N5D0 677 aa8.04□□□□□ -1.12
IFT88-201ENST00000319980 ATG4AQ8WYN0 398 aa8.04□□□□□ -1.12
IFT88-201ENST00000319980 MCEEQ96PE7 176 aa8.04□□□□□ -1.12
IFT88-201ENST00000319980 HERPUD2Q9BSE4 406 aa8.04□□□□□ -1.12
IFT88-201ENST00000319980 LSM8O95777 96 aaKnown RBP8.03□□□□□ -1.12
IFT88-201ENST00000319980 RPL21P46778 160 aaKnown RBP8.03□□□□□ -1.12
IFT88-201ENST00000319980 TNFAIP2Q03169 654 aa8.03□□□□□ -1.12
IFT88-201ENST00000319980 CYP4A22Q5TCH4 519 aa8.03□□□□□ -1.12
IFT88-201ENST00000319980 PPP1R2P3Q6NXS1 205 aa8.03□□□□□ -1.12
IFT88-201ENST00000319980 DCUN1D2Q6PH85 259 aa8.03□□□□□ -1.12
IFT88-201ENST00000319980 LEKR1Q6ZMV7 388 aa8.03□□□□□ -1.12
IFT88-201ENST00000319980 ERICH1Q86X53 443 aa8.03□□□□□ -1.12
IFT88-201ENST00000319980 RHOT1Q8IXI2 618 aa8.03□□□□□ -1.12
IFT88-201ENST00000319980 CCDC97Q96F63 343 aaPredicted RBP8.03□□□□□ -1.12
IFT88-201ENST00000319980 FAM49AQ9H0Q0 323 aaPredicted RBP8.03□□□□□ -1.12
IFT88-201ENST00000319980 CHST7Q9NS84 486 aa8.03□□□□□ -1.12
IFT88-201ENST00000319980 ZDHHC18Q9NUE0 388 aa8.03□□□□□ -1.12
IFT88-201ENST00000319980 CEP83Q9Y592 693 aa8.03□□□□□ -1.12
IFT88-201ENST00000319980 GOLGA6L10A6NI86 522 aa8.03□□□□□ -1.12
IFT88-201ENST00000319980 TSPAN1O60635 241 aa8.03□□□□□ -1.12
IFT88-201ENST00000319980 ECEL1O95672 775 aa8.03□□□□□ -1.12
IFT88-201ENST00000319980 CALB1P05937 261 aa8.03□□□□□ -1.12
IFT88-201ENST00000319980 RALAP11233 206 aa8.03□□□□□ -1.12
IFT88-201ENST00000319980 EIF4BP23588 611 aaKnown RBP8.03□□□□□ -1.12
IFT88-201ENST00000319980 ACTN2P35609 894 aa8.03□□□□□ -1.12
IFT88-201ENST00000319980 DRG2P55039 364 aaKnown RBP8.03□□□□□ -1.12
IFT88-201ENST00000319980 PPP1R7Q15435 360 aa8.03□□□□□ -1.12
IFT88-201ENST00000319980 SKIDA1Q1XH10 827 aa8.03□□□□□ -1.12
IFT88-201ENST00000319980 ATP13A4Q4VNC1 1196 aa8.03□□□□□ -1.12
IFT88-201ENST00000319980 IQSEC1Q6DN90 963 aa8.03□□□□□ -1.12
IFT88-201ENST00000319980 DNAJC24Q6P3W2 148 aa8.03□□□□□ -1.12
IFT88-201ENST00000319980 CD302Q8IX05 232 aa8.03□□□□□ -1.12
IFT88-201ENST00000319980 ADPGKQ9BRR6 497 aa8.03□□□□□ -1.12
IFT88-201ENST00000319980 ASB7Q9H672 318 aa8.03□□□□□ -1.12
IFT88-201ENST00000319980 LRRC19Q9H756 370 aa8.03□□□□□ -1.12
IFT88-201ENST00000319980 SMYD3Q9H7B4 428 aa8.03□□□□□ -1.12
IFT88-201ENST00000319980 COL1A2P08123 1366 aa8.02□□□□□ -1.12
IFT88-201ENST00000319980 A0A1B0GUA9 196 aa8.02□□□□□ -1.13
IFT88-201ENST00000319980 TMEM191CA6NGB0 347 aa8.02□□□□□ -1.13
IFT88-201ENST00000319980 F8VP50 259 aa8.02□□□□□ -1.13
IFT88-201ENST00000319980 H0YGN5 161 aa8.02□□□□□ -1.13
IFT88-201ENST00000319980 TRIM66O15016 1216 aa8.02□□□□□ -1.13
IFT88-201ENST00000319980 TCF4P15884 667 aa8.02□□□□□ -1.13
IFT88-201ENST00000319980 POLR2BP30876 1174 aaKnown RBP8.02□□□□□ -1.13
IFT88-201ENST00000319980 FNTAP49354 379 aa8.02□□□□□ -1.13
IFT88-201ENST00000319980 YWHAEP62258 255 aaKnown RBP8.02□□□□□ -1.13
IFT88-201ENST00000319980 IRX5P78411 483 aaPredicted RBP8.02□□□□□ -1.13
IFT88-201ENST00000319980 MTMR3Q13615 1198 aa8.02□□□□□ -1.13
IFT88-201ENST00000319980 ZSCAN26Q16670 478 aa8.02□□□□□ -1.13
IFT88-201ENST00000319980 TTC19Q6DKK2 380 aaPredicted RBP8.02□□□□□ -1.13
IFT88-201ENST00000319980 ZDHHC24Q6UX98 284 aa8.02□□□□□ -1.13
IFT88-201ENST00000319980 DPH6Q7L8W6 267 aa8.02□□□□□ -1.13
IFT88-201ENST00000319980 ACAP3Q96P50 834 aa8.02□□□□□ -1.13
IFT88-201ENST00000319980 FAM118BQ9BPY3 351 aa8.02□□□□□ -1.13
IFT88-201ENST00000319980 ZNF518BQ9C0D4 1074 aa8.02□□□□□ -1.13
IFT88-201ENST00000319980 SDCBP2Q9H190 292 aa8.02□□□□□ -1.13
IFT88-201ENST00000319980 KLHL11Q9NVR0 708 aa8.02□□□□□ -1.13
IFT88-201ENST00000319980 GRHL1Q9NZI5 618 aa8.02□□□□□ -1.13
IFT88-201ENST00000319980 IP6K2Q9UHH9 426 aa8.02□□□□□ -1.13
IFT88-201ENST00000319980 NFS1Q9Y697 457 aa8.02□□□□□ -1.13
IFT88-201ENST00000319980 ZNFX1Q9P2E3 1918 aaKnown RBP8.02□□□□□ -1.13
IFT88-201ENST00000319980 PSTPIP1O43586 416 aa8.02□□□□□ -1.13
IFT88-201ENST00000319980 MYZAPP0CAP1 466 aa8.02□□□□□ -1.13
IFT88-201ENST00000319980 ATP1A2P50993 1020 aa8.02□□□□□ -1.13
IFT88-201ENST00000319980 RAD23BP54727 409 aa8.02□□□□□ -1.13
IFT88-201ENST00000319980 ZNF844Q08AG5 666 aa8.02□□□□□ -1.13
IFT88-201ENST00000319980 TMEM132DQ14C87 1099 aa8.02□□□□□ -1.13
IFT88-201ENST00000319980 DENND1BQ6P3S1 775 aa8.02□□□□□ -1.13
IFT88-201ENST00000319980 LENG1Q96BZ8 264 aaPredicted RBP8.02□□□□□ -1.13
IFT88-201ENST00000319980 HPDLQ96IR7 371 aa8.02□□□□□ -1.13
IFT88-201ENST00000319980 TWNKQ96RR1 684 aa8.02□□□□□ -1.13
IFT88-201ENST00000319980 BCO2Q9BYV7 579 aa8.02□□□□□ -1.13
IFT88-201ENST00000319980 SLC5A4Q9NY91 659 aa8.02□□□□□ -1.13
IFT88-201ENST00000319980 TJP2Q9UDY2 1190 aa8.02□□□□□ -1.13
IFT88-201ENST00000319980 HMGXB4Q9UGU5 601 aa8.02□□□□□ -1.13
IFT88-201ENST00000319980 PCDHGC3Q9UN70 934 aa8.02□□□□□ -1.13
IFT88-201ENST00000319980 AGAP1Q9UPQ3 857 aa8.02□□□□□ -1.13
IFT88-201ENST00000319980 SIP14410 1827 aa8.02□□□□□ -1.13
IFT88-201ENST00000319980 PI4K2BG5E9Z4 385 aa8.01□□□□□ -1.13
IFT88-201ENST00000319980 GOLGA8SH3BPF8 625 aa8.01□□□□□ -1.13
IFT88-201ENST00000319980 HNRNPH2P55795 449 aaKnown RBP8.01□□□□□ -1.13
IFT88-201ENST00000319980 HUNKP57058 714 aa8.01□□□□□ -1.13
IFT88-201ENST00000319980 KRT17Q04695 432 aa8.01□□□□□ -1.13
IFT88-201ENST00000319980 TRIP13Q15645 432 aaPredicted RBP8.01□□□□□ -1.13
IFT88-201ENST00000319980 PTPN20Q4JDL3 420 aa8.01□□□□□ -1.13
IFT88-201ENST00000319980 CST9Q5W186 159 aa8.01□□□□□ -1.13
IFT88-201ENST00000319980 LRIG3Q6UXM1 1119 aa8.01□□□□□ -1.13
IFT88-201ENST00000319980 ANKS1BQ7Z6G8 1248 aa8.01□□□□□ -1.13
IFT88-201ENST00000319980 C12orf50Q8NA57 414 aaPredicted RBP8.01□□□□□ -1.13
IFT88-201ENST00000319980 CXorf38Q8TB03 319 aa8.01□□□□□ -1.13
IFT88-201ENST00000319980 ATP6V1G3Q96LB4 118 aa8.01□□□□□ -1.13
IFT88-201ENST00000319980 RUNDC3BQ96NL0 473 aa8.01□□□□□ -1.13
IFT88-201ENST00000319980 CAPS2Q9BXY5 557 aa8.01□□□□□ -1.13
IFT88-201ENST00000319980 OSBPL8Q9BZF1 889 aa8.01□□□□□ -1.13
IFT88-201ENST00000319980 BCCIPQ9P287 314 aaKnown RBP eCLIP8.01□□□□□ -1.13
IFT88-201ENST00000319980 R3HDM2Q9Y2K5 976 aaKnown RBP8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms