RNA–Protein interactions for RNA: ENST00000318842.11

RPGR-201, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RPGR, Length 3,108 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-201ENST00000318842 TLR3O15455 904 aaKnown RBP10.15□□□□□ -0.78
RPGR-201ENST00000318842 GYG2O15488 501 aa10.15□□□□□ -0.78
RPGR-201ENST00000318842 CSDE1O75534 798 aaKnown RBP10.15□□□□□ -0.78
RPGR-201ENST00000318842 OR6B1O95007 311 aa10.15□□□□□ -0.78
RPGR-201ENST00000318842 GLRA2P23416 452 aa10.15□□□□□ -0.78
RPGR-201ENST00000318842 CALRP27797 417 aaKnown RBP10.15□□□□□ -0.78
RPGR-201ENST00000318842 PSMC5P62195 406 aa10.15□□□□□ -0.78
RPGR-201ENST00000318842 CLEC16AQ2KHT3 1053 aa10.15□□□□□ -0.78
RPGR-201ENST00000318842 CTC1Q2NKJ3 1217 aa10.15□□□□□ -0.78
RPGR-201ENST00000318842 NPNTQ6UXI9 565 aa10.15□□□□□ -0.78
RPGR-201ENST00000318842 C4orf50Q6ZRC1 276 aa10.15□□□□□ -0.78
RPGR-201ENST00000318842 TREML1Q86YW5 311 aa10.15□□□□□ -0.78
RPGR-201ENST00000318842 HACE1Q8IYU2 909 aa10.15□□□□□ -0.78
RPGR-201ENST00000318842 ATL2Q8NHH9 583 aa10.15□□□□□ -0.78
RPGR-201ENST00000318842 CCHCR1Q8TD31 782 aa10.15□□□□□ -0.78
RPGR-201ENST00000318842 DENND1AQ8TEH3 1009 aa10.15□□□□□ -0.78
RPGR-201ENST00000318842 SERAC1Q96JX3 654 aa10.15□□□□□ -0.78
RPGR-201ENST00000318842 TMEM109Q9BVC6 243 aa10.15□□□□□ -0.78
RPGR-201ENST00000318842 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.15□□□□□ -0.78
RPGR-201ENST00000318842 RAB20Q9NX57 234 aa10.15□□□□□ -0.78
RPGR-201ENST00000318842 CPSF2Q9P2I0 782 aaKnown RBP10.15□□□□□ -0.78
RPGR-201ENST00000318842 ANKFY1Q9P2R3 1169 aa10.15□□□□□ -0.78
RPGR-201ENST00000318842 PCDHGB4Q9UN71 923 aa10.15□□□□□ -0.78
RPGR-201ENST00000318842 AFG3L2Q9Y4W6 797 aa10.15□□□□□ -0.78
RPGR-201ENST00000318842 PCDHGB5Q9Y5G0 923 aa10.15□□□□□ -0.78
RPGR-201ENST00000318842 TTLL13PA6NNM8 815 aa10.15□□□□□ -0.79
RPGR-201ENST00000318842 SOCS7O14512 581 aa10.15□□□□□ -0.79
RPGR-201ENST00000318842 EIF3DO15371 548 aaKnown RBP eCLIP10.15□□□□□ -0.79
RPGR-201ENST00000318842 TNNI1P19237 187 aa10.15□□□□□ -0.79
RPGR-201ENST00000318842 ATP6V1C1P21283 382 aa10.15□□□□□ -0.79
RPGR-201ENST00000318842 ATP2B4P23634 1241 aa10.15□□□□□ -0.79
RPGR-201ENST00000318842 CCNFP41002 786 aa10.15□□□□□ -0.79
RPGR-201ENST00000318842 RARRES1P49788 294 aa10.15□□□□□ -0.79
RPGR-201ENST00000318842 CACNA2D1P54289 1103 aa10.15□□□□□ -0.79
RPGR-201ENST00000318842 UBAP2LQ14157 1087 aaKnown RBP10.15□□□□□ -0.79
RPGR-201ENST00000318842 SEPT7Q16181 437 aaKnown RBP10.15□□□□□ -0.79
RPGR-201ENST00000318842 VPS52Q8N1B4 723 aa10.15□□□□□ -0.79
RPGR-201ENST00000318842 PDCD7Q8N8D1 485 aaKnown RBP10.15□□□□□ -0.79
RPGR-201ENST00000318842 MCUR1Q96AQ8 359 aa10.15□□□□□ -0.79
RPGR-201ENST00000318842 NGLY1Q96IV0 654 aa10.15□□□□□ -0.79
RPGR-201ENST00000318842 ZNF333Q96JL9 665 aa10.15□□□□□ -0.79
RPGR-201ENST00000318842 PPP1R36Q96LQ0 422 aa10.15□□□□□ -0.79
RPGR-201ENST00000318842 NACC1Q96RE7 527 aa10.15□□□□□ -0.79
RPGR-201ENST00000318842 TUBGCP5Q96RT8 1024 aa10.15□□□□□ -0.79
RPGR-201ENST00000318842 TMEM120AQ9BXJ8 343 aa10.15□□□□□ -0.79
RPGR-201ENST00000318842 ROPN1BQ9BZX4 212 aaPredicted RBP10.15□□□□□ -0.79
RPGR-201ENST00000318842 ROPN1Q9HAT0 212 aaPredicted RBP10.15□□□□□ -0.79
RPGR-201ENST00000318842 MYPNQ86TC9 1320 aa10.14□□□□□ -0.79
RPGR-201ENST00000318842 TESPA1A2RU30 521 aaPredicted RBP10.14□□□□□ -0.79
RPGR-201ENST00000318842 PPEF1O14829 653 aaPredicted RBP10.14□□□□□ -0.79
RPGR-201ENST00000318842 HNRNPDLO14979 420 aaKnown RBP10.14□□□□□ -0.79
RPGR-201ENST00000318842 PDE5AO76074 875 aa10.14□□□□□ -0.79
RPGR-201ENST00000318842 NSFP46459 744 aaKnown RBP10.14□□□□□ -0.79
RPGR-201ENST00000318842 PGGT1BP53609 377 aa10.14□□□□□ -0.79
RPGR-201ENST00000318842 ALDH18A1P54886 795 aaKnown RBP10.14□□□□□ -0.79
RPGR-201ENST00000318842 KLC1Q07866 573 aa10.14□□□□□ -0.79
RPGR-201ENST00000318842 AP3B2Q13367 1082 aa10.14□□□□□ -0.79
RPGR-201ENST00000318842 Q3C1V9 767 aa10.14□□□□□ -0.79
RPGR-201ENST00000318842 C3orf62Q6ZUJ4 267 aa10.14□□□□□ -0.79
RPGR-201ENST00000318842 PRPF39Q86UA1 669 aaKnown RBP10.14□□□□□ -0.79
RPGR-201ENST00000318842 AGR3Q8TD06 166 aa10.14□□□□□ -0.79
RPGR-201ENST00000318842 PYDC1Q8WXC3 89 aa10.14□□□□□ -0.79
RPGR-201ENST00000318842 PRMT6Q96LA8 375 aaPredicted RBP10.14□□□□□ -0.79
RPGR-201ENST00000318842 NT5C1BQ96P26 610 aa10.14□□□□□ -0.79
RPGR-201ENST00000318842 UBE2OQ9C0C9 1292 aaKnown RBP10.14□□□□□ -0.79
RPGR-201ENST00000318842 APOBEC3GQ9HC16 384 aaKnown RBP10.14□□□□□ -0.79
RPGR-201ENST00000318842 KRT82Q9NSB4 513 aa10.14□□□□□ -0.79
RPGR-201ENST00000318842 EURLQ9NYK6 297 aa10.14□□□□□ -0.79
RPGR-201ENST00000318842 TAS2R1Q9NYW7 299 aa10.14□□□□□ -0.79
RPGR-201ENST00000318842 DIS3Q9Y2L1 958 aaKnown RBP10.14□□□□□ -0.79
RPGR-201ENST00000318842 KIF3CO14782 793 aa10.14□□□□□ -0.79
RPGR-201ENST00000318842 SNUPNO95149 360 aaKnown RBP10.14□□□□□ -0.79
RPGR-201ENST00000318842 POLR2MP0CAP2 368 aa10.14□□□□□ -0.79
RPGR-201ENST00000318842 MYL2P10916 166 aa10.14□□□□□ -0.79
RPGR-201ENST00000318842 KLRC2P26717 231 aa10.14□□□□□ -0.79
RPGR-201ENST00000318842 RANBP1P43487 201 aa10.14□□□□□ -0.79
RPGR-201ENST00000318842 MFAP3P55082 362 aa10.14□□□□□ -0.79
RPGR-201ENST00000318842 BASP1P80723 227 aaKnown RBP10.14□□□□□ -0.79
RPGR-201ENST00000318842 ZNF252P-AS1Q0IIN9 211 aa10.14□□□□□ -0.79
RPGR-201ENST00000318842 CETN1Q12798 172 aa10.14□□□□□ -0.79
RPGR-201ENST00000318842 KLF1Q13351 362 aaPredicted RBP10.14□□□□□ -0.79
RPGR-201ENST00000318842 C11orf91Q3C1V1 193 aa10.14□□□□□ -0.79
RPGR-201ENST00000318842 LPCAT4Q643R3 524 aa10.14□□□□□ -0.79
RPGR-201ENST00000318842 FOXR2Q6PJQ5 311 aa10.14□□□□□ -0.79
RPGR-201ENST00000318842 ANKRD35Q8N283 1001 aa10.14□□□□□ -0.79
RPGR-201ENST00000318842 FBXO41Q8TF61 875 aa10.14□□□□□ -0.79
RPGR-201ENST00000318842 RAB3IPQ96QF0 476 aaPredicted RBP10.14□□□□□ -0.79
RPGR-201ENST00000318842 C20orf27Q9GZN8 174 aa10.14□□□□□ -0.79
RPGR-201ENST00000318842 CYP4F11Q9HBI6 524 aa10.14□□□□□ -0.79
RPGR-201ENST00000318842 PPM1HQ9ULR3 514 aa10.14□□□□□ -0.79
RPGR-201ENST00000318842 ATRNL1Q5VV63 1379 aa10.14□□□□□ -0.79
RPGR-201ENST00000318842 DCAF8L1A6NGE4 600 aa10.13□□□□□ -0.79
RPGR-201ENST00000318842 PLSCR1O15162 318 aa10.13□□□□□ -0.79
RPGR-201ENST00000318842 TMEM63AO94886 807 aa10.13□□□□□ -0.79
RPGR-201ENST00000318842 PYGBP11216 843 aa10.13□□□□□ -0.79
RPGR-201ENST00000318842 MARK3P27448 753 aa10.13□□□□□ -0.79
RPGR-201ENST00000318842 YWHABP31946 246 aaKnown RBP10.13□□□□□ -0.79
RPGR-201ENST00000318842 ARL4CP56559 192 aa10.13□□□□□ -0.79
RPGR-201ENST00000318842 OSTNP61366 133 aa10.13□□□□□ -0.79
RPGR-201ENST00000318842 OR52E8Q6IFG1 317 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms