RNA–Protein interactions for RNA: ENST00000316448.9

CALR-201, Transcript of calreticulin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CALR, Length 1,903 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALR-201ENST00000316448 UBQLN1Q9UMX0 589 aaKnown RBP16.77■□□□□ 0.28
CALR-201ENST00000316448 KBTBD13C9JR72 458 aa16.76■□□□□ 0.27
CALR-201ENST00000316448 CILPO75339 1184 aa16.76■□□□□ 0.27
CALR-201ENST00000316448 ATF7P17544 494 aaPredicted RBP16.76■□□□□ 0.27
CALR-201ENST00000316448 VSNL1P62760 191 aa16.76■□□□□ 0.27
CALR-201ENST00000316448 NOMO3P69849 1222 aa16.76■□□□□ 0.27
CALR-201ENST00000316448 GPC5P78333 572 aa16.76■□□□□ 0.27
CALR-201ENST00000316448 PAK2Q13177 524 aa16.76■□□□□ 0.27
CALR-201ENST00000316448 RPS6KA1Q15418 735 aa16.76■□□□□ 0.27
CALR-201ENST00000316448 CFAP221Q4G0U5 840 aa16.76■□□□□ 0.27
CALR-201ENST00000316448 CCDC181Q5TID7 509 aa16.76■□□□□ 0.27
CALR-201ENST00000316448 PHLDB2Q86SQ0 1253 aa16.76■□□□□ 0.27
CALR-201ENST00000316448 NT5DC3Q86UY8 548 aa16.76■□□□□ 0.27
CALR-201ENST00000316448 RHOT2Q8IXI1 618 aa16.76■□□□□ 0.27
CALR-201ENST00000316448 WDTC1Q8N5D0 677 aa16.76■□□□□ 0.27
CALR-201ENST00000316448 SLC4A11Q8NBS3 891 aa16.76■□□□□ 0.27
CALR-201ENST00000316448 FAXDC2Q96IV6 333 aa16.76■□□□□ 0.27
CALR-201ENST00000316448 CALR3Q96L12 384 aaKnown RBP16.76■□□□□ 0.27
CALR-201ENST00000316448 PPP1R10Q96QC0 940 aaKnown RBP16.76■□□□□ 0.27
CALR-201ENST00000316448 GAD1Q99259 594 aa16.76■□□□□ 0.27
CALR-201ENST00000316448 ARFGAP3Q9NP61 516 aa16.76■□□□□ 0.27
CALR-201ENST00000316448 SMARCAL1Q9NZC9 954 aa16.76■□□□□ 0.27
CALR-201ENST00000316448 EHD2Q9NZN4 543 aa16.76■□□□□ 0.27
CALR-201ENST00000316448 PDCD11Q14690 1871 aaKnown RBP16.76■□□□□ 0.27
CALR-201ENST00000316448 DNM1LO00429 736 aa16.76■□□□□ 0.27
CALR-201ENST00000316448 BUB1BO60566 1050 aaPredicted RBP16.76■□□□□ 0.27
CALR-201ENST00000316448 SEC31AO94979 1220 aaKnown RBP16.76■□□□□ 0.27
CALR-201ENST00000316448 ITGA4P13612 1032 aa16.76■□□□□ 0.27
CALR-201ENST00000316448 PAFAH1B1P43034 410 aa16.76■□□□□ 0.27
CALR-201ENST00000316448 MCOLN2Q8IZK6 566 aa16.76■□□□□ 0.27
CALR-201ENST00000316448 DNAJC5GQ8N7S2 189 aa16.76■□□□□ 0.27
CALR-201ENST00000316448 ADAM2Q99965 735 aa16.76■□□□□ 0.27
CALR-201ENST00000316448 MRPL45Q9BRJ2 306 aaKnown RBP16.76■□□□□ 0.27
CALR-201ENST00000316448 RNF208Q9H0X6 261 aa16.76■□□□□ 0.27
CALR-201ENST00000316448 CYP3A43Q9HB55 503 aa16.76■□□□□ 0.27
CALR-201ENST00000316448 OGDHLQ9ULD0 1010 aa16.76■□□□□ 0.27
CALR-201ENST00000316448 ATP8B1O43520 1251 aa16.75■□□□□ 0.27
CALR-201ENST00000316448 CYP1A2P05177 515 aa16.75■□□□□ 0.27
CALR-201ENST00000316448 MLH1P40692 756 aa16.75■□□□□ 0.27
CALR-201ENST00000316448 MNX1P50219 401 aaPredicted RBP16.75■□□□□ 0.27
CALR-201ENST00000316448 PTP4A2Q12974 167 aa16.75■□□□□ 0.27
CALR-201ENST00000316448 GPNMBQ14956 572 aa16.75■□□□□ 0.27
CALR-201ENST00000316448 DAAM2Q86T65 1068 aa16.75■□□□□ 0.27
CALR-201ENST00000316448 HES6Q96HZ4 224 aa16.75■□□□□ 0.27
CALR-201ENST00000316448 MS4A14Q96JA4 679 aa16.75■□□□□ 0.27
CALR-201ENST00000316448 SNX9Q9Y5X1 595 aa16.75■□□□□ 0.27
CALR-201ENST00000316448 MTA2O94776 668 aa16.74■□□□□ 0.27
CALR-201ENST00000316448 IBSPP21815 317 aaPredicted RBP16.74■□□□□ 0.27
CALR-201ENST00000316448 CENPCQ03188 943 aa16.74■□□□□ 0.27
CALR-201ENST00000316448 DENND1BQ6P3S1 775 aa16.74■□□□□ 0.27
CALR-201ENST00000316448 PEX26Q7Z412 305 aa16.74■□□□□ 0.27
CALR-201ENST00000316448 CPNE8Q86YQ8 564 aa16.74■□□□□ 0.27
CALR-201ENST00000316448 FAM126BQ8IXS8 530 aa16.74■□□□□ 0.27
CALR-201ENST00000316448 LRRC52Q8N7C0 313 aa16.74■□□□□ 0.27
CALR-201ENST00000316448 ZNF653Q96CK0 615 aa16.74■□□□□ 0.27
CALR-201ENST00000316448 RNF216Q9NWF9 866 aaPredicted RBP16.74■□□□□ 0.27
CALR-201ENST00000316448 OGFRQ9NZT2 677 aa16.74■□□□□ 0.27
CALR-201ENST00000316448 TLR3O15455 904 aaKnown RBP16.74■□□□□ 0.27
CALR-201ENST00000316448 HCRTO43612 131 aa16.74■□□□□ 0.27
CALR-201ENST00000316448 ZNF623O75123 536 aa16.74■□□□□ 0.27
CALR-201ENST00000316448 DNA2P51530 1060 aa16.74■□□□□ 0.27
CALR-201ENST00000316448 NDST1P52848 882 aa16.74■□□□□ 0.27
CALR-201ENST00000316448 TNNC1P63316 161 aa16.74■□□□□ 0.27
CALR-201ENST00000316448 INCA1Q0VD86 236 aa16.74■□□□□ 0.27
CALR-201ENST00000316448 MYO1EQ12965 1108 aa16.74■□□□□ 0.27
CALR-201ENST00000316448 LONRF2Q1L5Z9 754 aa16.74■□□□□ 0.27
CALR-201ENST00000316448 BEND6Q5SZJ8 279 aaPredicted RBP16.74■□□□□ 0.27
CALR-201ENST00000316448 C11orf63Q6NUN7 778 aa16.74■□□□□ 0.27
CALR-201ENST00000316448 MON1BQ7L1V2 547 aa16.74■□□□□ 0.27
CALR-201ENST00000316448 LINC01599Q8WXQ3 324 aa16.74■□□□□ 0.27
CALR-201ENST00000316448 RUBCNQ92622 972 aa16.74■□□□□ 0.27
CALR-201ENST00000316448 PBKQ96KB5 322 aa16.74■□□□□ 0.27
CALR-201ENST00000316448 BTBD6Q96KE9 485 aa16.74■□□□□ 0.27
CALR-201ENST00000316448 TRAIPQ9BWF2 469 aa16.74■□□□□ 0.27
CALR-201ENST00000316448 RBM12Q9NTZ6 932 aaKnown RBP16.74■□□□□ 0.27
CALR-201ENST00000316448 A0A0U1RQF3 1178 aa16.73■□□□□ 0.27
CALR-201ENST00000316448 ARL5CA6NH57 179 aa16.73■□□□□ 0.27
CALR-201ENST00000316448 KCNK3O14649 394 aa16.73■□□□□ 0.27
CALR-201ENST00000316448 CAND2O75155 1236 aa16.73■□□□□ 0.27
CALR-201ENST00000316448 ERLIN1O75477 346 aa16.73■□□□□ 0.27
CALR-201ENST00000316448 CD4P01730 458 aa16.73■□□□□ 0.27
CALR-201ENST00000316448 CYP3A5P20815 502 aa16.73■□□□□ 0.27
CALR-201ENST00000316448 MCM3P25205 808 aa16.73■□□□□ 0.27
CALR-201ENST00000316448 YWHAEP62258 255 aaKnown RBP16.73■□□□□ 0.27
CALR-201ENST00000316448 SOWAHAQ2M3V2 549 aa16.73■□□□□ 0.27
CALR-201ENST00000316448 TMEM176AQ96HP8 235 aa16.73■□□□□ 0.27
CALR-201ENST00000316448 LPIN3Q9BQK8 851 aa16.73■□□□□ 0.27
CALR-201ENST00000316448 CTTNBP2NLQ9P2B4 639 aa16.73■□□□□ 0.27
CALR-201ENST00000316448 CNOT8Q9UFF9 292 aaKnown RBP16.73■□□□□ 0.27
CALR-201ENST00000316448 CYTH4Q9UIA0 394 aa16.73■□□□□ 0.27
CALR-201ENST00000316448 GTF3C4Q9UKN8 822 aa16.73■□□□□ 0.27
CALR-201ENST00000316448 BARX2Q9UMQ3 279 aaPredicted RBP16.73■□□□□ 0.27
CALR-201ENST00000316448 PCDHGC3Q9UN70 934 aa16.73■□□□□ 0.27
CALR-201ENST00000316448 SQORQ9Y6N5 450 aa16.73■□□□□ 0.27
CALR-201ENST00000316448 FGFR1P11362 822 aa16.72■□□□□ 0.27
CALR-201ENST00000316448 CD19P15391 556 aa16.72■□□□□ 0.27
CALR-201ENST00000316448 RRM1P23921 792 aa16.72■□□□□ 0.27
CALR-201ENST00000316448 LRPAP1P30533 357 aa16.72■□□□□ 0.27
CALR-201ENST00000316448 SCNN1GP51170 649 aa16.72■□□□□ 0.27
CALR-201ENST00000316448 TRIM72Q6ZMU5 477 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms