RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 BANPQ8N9N5 519 aa8.35□□□□□ -1.07
CNOT4-201ENST00000315544 SHKBP1Q8TBC3 707 aa8.35□□□□□ -1.07
CNOT4-201ENST00000315544 ZNF296Q8WUU4 475 aaPredicted RBP8.35□□□□□ -1.07
CNOT4-201ENST00000315544 DNM3Q9UQ16 869 aa8.35□□□□□ -1.07
CNOT4-201ENST00000315544 STARD13Q9Y3M8 1113 aa8.35□□□□□ -1.07
CNOT4-201ENST00000315544 SAMM50Q9Y512 469 aa8.35□□□□□ -1.07
CNOT4-201ENST00000315544 E5RJQ4 531 aa8.35□□□□□ -1.07
CNOT4-201ENST00000315544 USO1O60763 962 aaKnown RBP8.35□□□□□ -1.07
CNOT4-201ENST00000315544 ALDH1A2O94788 518 aa8.35□□□□□ -1.07
CNOT4-201ENST00000315544 GDF11O95390 407 aa8.35□□□□□ -1.07
CNOT4-201ENST00000315544 FTLP02792 175 aaPredicted RBP8.35□□□□□ -1.07
CNOT4-201ENST00000315544 P4HBP07237 508 aaKnown RBP8.35□□□□□ -1.07
CNOT4-201ENST00000315544 GDF10P55107 478 aa8.35□□□□□ -1.07
CNOT4-201ENST00000315544 HUNKP57058 714 aa8.35□□□□□ -1.07
CNOT4-201ENST00000315544 MAGOHP61326 146 aaKnown RBP8.35□□□□□ -1.07
CNOT4-201ENST00000315544 RPS6KA1Q15418 735 aa8.35□□□□□ -1.07
CNOT4-201ENST00000315544 CCNG2Q16589 344 aa8.35□□□□□ -1.07
CNOT4-201ENST00000315544 RAB6CQ53S08 254 aa8.35□□□□□ -1.07
CNOT4-201ENST00000315544 OR52E8Q6IFG1 317 aa8.35□□□□□ -1.07
CNOT4-201ENST00000315544 ZNF746Q6NUN9 644 aaPredicted RBP8.35□□□□□ -1.07
CNOT4-201ENST00000315544 XRRA1Q6P2D8 792 aa8.35□□□□□ -1.07
CNOT4-201ENST00000315544 FNIP1Q8TF40 1166 aa8.35□□□□□ -1.07
CNOT4-201ENST00000315544 MAGOHBQ96A72 148 aaKnown RBP8.35□□□□□ -1.07
CNOT4-201ENST00000315544 NACC1Q96RE7 527 aa8.35□□□□□ -1.07
CNOT4-201ENST00000315544 TRIM34Q9BYJ4 488 aa8.35□□□□□ -1.07
CNOT4-201ENST00000315544 RAB6CQ9H0N0 254 aa8.35□□□□□ -1.07
CNOT4-201ENST00000315544 CD248Q9HCU0 757 aa8.35□□□□□ -1.07
CNOT4-201ENST00000315544 TXNRD2Q9NNW7 524 aa8.35□□□□□ -1.07
CNOT4-201ENST00000315544 HAO1Q9UJM8 370 aa8.35□□□□□ -1.07
CNOT4-201ENST00000315544 NUB1Q9Y5A7 615 aa8.35□□□□□ -1.07
CNOT4-201ENST00000315544 ATMINO43313 823 aaPredicted RBP8.34□□□□□ -1.07
CNOT4-201ENST00000315544 PSTPIP1O43586 416 aa8.34□□□□□ -1.07
CNOT4-201ENST00000315544 OPA1O60313 960 aa8.34□□□□□ -1.07
CNOT4-201ENST00000315544 CACNG3O60359 315 aa8.34□□□□□ -1.07
CNOT4-201ENST00000315544 CSDE1O75534 798 aaKnown RBP8.34□□□□□ -1.07
CNOT4-201ENST00000315544 PROSCO94903 275 aa8.34□□□□□ -1.07
CNOT4-201ENST00000315544 AMHP03971 560 aa8.34□□□□□ -1.07
CNOT4-201ENST00000315544 KCNJ2P63252 427 aa8.34□□□□□ -1.07
CNOT4-201ENST00000315544 TMEM266Q2M3C6 531 aa8.34□□□□□ -1.07
CNOT4-201ENST00000315544 CTU1Q7Z7A3 348 aaKnown RBP8.34□□□□□ -1.07
CNOT4-201ENST00000315544 C10orf67Q8IYJ2 551 aa8.34□□□□□ -1.07
CNOT4-201ENST00000315544 TFAP2BQ92481 460 aa8.34□□□□□ -1.07
CNOT4-201ENST00000315544 PRR11Q96HE9 360 aaPredicted RBP8.34□□□□□ -1.07
CNOT4-201ENST00000315544 ZNF419Q96HQ0 510 aaPredicted RBP8.34□□□□□ -1.07
CNOT4-201ENST00000315544 PORCNQ9H237 461 aa8.34□□□□□ -1.07
CNOT4-201ENST00000315544 TMEM134Q9H6X4 195 aa8.34□□□□□ -1.07
CNOT4-201ENST00000315544 CPSF3Q9UKF6 684 aaKnown RBP8.34□□□□□ -1.07
CNOT4-201ENST00000315544 EMCNQ9ULC0 261 aa8.34□□□□□ -1.07
CNOT4-201ENST00000315544 hCG_1818297A0A087WSY0 165 aa8.34□□□□□ -1.07
CNOT4-201ENST00000315544 TCRBV7S3A2A0A539 114 aa8.34□□□□□ -1.07
CNOT4-201ENST00000315544 SMNDC1O75940 238 aaKnown RBP eCLIP8.34□□□□□ -1.07
CNOT4-201ENST00000315544 ASS1P00966 412 aaKnown RBP8.34□□□□□ -1.07
CNOT4-201ENST00000315544 ASNSP08243 561 aa8.34□□□□□ -1.07
CNOT4-201ENST00000315544 KRT16P08779 473 aa8.34□□□□□ -1.07
CNOT4-201ENST00000315544 H2AFZP0C0S5 128 aa8.34□□□□□ -1.07
CNOT4-201ENST00000315544 CYBAP13498 195 aa8.34□□□□□ -1.07
CNOT4-201ENST00000315544 GPC5P78333 572 aa8.34□□□□□ -1.07
CNOT4-201ENST00000315544 ADAM17P78536 824 aa8.34□□□□□ -1.07
CNOT4-201ENST00000315544 DR1Q01658 176 aa8.34□□□□□ -1.07
CNOT4-201ENST00000315544 INCA1Q0VD86 236 aa8.34□□□□□ -1.07
CNOT4-201ENST00000315544 SNRNP35Q16560 246 aaKnown RBP8.34□□□□□ -1.07
CNOT4-201ENST00000315544 FAM187BQ17R55 369 aa8.34□□□□□ -1.07
CNOT4-201ENST00000315544 H2AFVQ71UI9 128 aa8.34□□□□□ -1.07
CNOT4-201ENST00000315544 ARCQ7LC44 396 aa8.34□□□□□ -1.07
CNOT4-201ENST00000315544 CHMP6Q96FZ7 201 aa8.34□□□□□ -1.07
CNOT4-201ENST00000315544 ALS2CR12Q96Q35 445 aa8.34□□□□□ -1.07
CNOT4-201ENST00000315544 CNOT10Q9H9A5 744 aaKnown RBP8.34□□□□□ -1.07
CNOT4-201ENST00000315544 SMYD2Q9NRG4 433 aa8.34□□□□□ -1.07
CNOT4-201ENST00000315544 KLC4Q9NSK0 619 aa8.34□□□□□ -1.07
CNOT4-201ENST00000315544 CD1EP15812 388 aa8.34□□□□□ -1.08
CNOT4-201ENST00000315544 CNGA1P29973 690 aa8.34□□□□□ -1.08
CNOT4-201ENST00000315544 YWHABP31946 246 aaKnown RBP8.34□□□□□ -1.08
CNOT4-201ENST00000315544 MCL1Q07820 350 aa8.34□□□□□ -1.08
CNOT4-201ENST00000315544 PRKD1Q15139 912 aaPredicted RBP8.34□□□□□ -1.08
CNOT4-201ENST00000315544 STEAP4Q687X5 459 aa8.34□□□□□ -1.08
CNOT4-201ENST00000315544 KIAA1328Q86T90 577 aa8.34□□□□□ -1.08
CNOT4-201ENST00000315544 RPUSD2Q8IZ73 545 aaKnown RBP8.34□□□□□ -1.08
CNOT4-201ENST00000315544 TAAR1Q96RJ0 339 aa8.34□□□□□ -1.08
CNOT4-201ENST00000315544 NCAPGQ9BPX3 1015 aa8.34□□□□□ -1.08
CNOT4-201ENST00000315544 CYP39A1Q9NYL5 469 aa8.34□□□□□ -1.08
CNOT4-201ENST00000315544 A8MUI8 341 aa8.33□□□□□ -1.08
CNOT4-201ENST00000315544 LIN7AO14910 233 aaPredicted RBP8.33□□□□□ -1.08
CNOT4-201ENST00000315544 CST3P01034 146 aaPredicted RBP8.33□□□□□ -1.08
CNOT4-201ENST00000315544 SBK3P0C264 359 aa8.33□□□□□ -1.08
CNOT4-201ENST00000315544 SCP2P22307 547 aa8.33□□□□□ -1.08
CNOT4-201ENST00000315544 GLRA2P23416 452 aa8.33□□□□□ -1.08
CNOT4-201ENST00000315544 TMEM132BQ14DG7 1078 aa8.33□□□□□ -1.08
CNOT4-201ENST00000315544 RASIP1Q5U651 963 aa8.33□□□□□ -1.08
CNOT4-201ENST00000315544 PADI6Q6TGC4 694 aa8.33□□□□□ -1.08
CNOT4-201ENST00000315544 POLNQ7Z5Q5 900 aa8.33□□□□□ -1.08
CNOT4-201ENST00000315544 GPIHBP1Q8IV16 184 aa8.33□□□□□ -1.08
CNOT4-201ENST00000315544 SYCE1Q8N0S2 351 aa8.33□□□□□ -1.08
CNOT4-201ENST00000315544 KLHDC9Q8NEP7 349 aa8.33□□□□□ -1.08
CNOT4-201ENST00000315544 ASAP3Q8TDY4 903 aa8.33□□□□□ -1.08
CNOT4-201ENST00000315544 MCRS1Q96EZ8 462 aa8.33□□□□□ -1.08
CNOT4-201ENST00000315544 OLFM3Q96PB7 478 aa8.33□□□□□ -1.08
CNOT4-201ENST00000315544 E9PQ18 207 aa8.33□□□□□ -1.08
CNOT4-201ENST00000315544 SMAPO00193 183 aa8.33□□□□□ -1.08
CNOT4-201ENST00000315544 PRKCHP24723 683 aa8.33□□□□□ -1.08
CNOT4-201ENST00000315544 TUBP50607 506 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms