RNA–Protein interactions for RNA: ENST00000315249.11

RFFL-201, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFFL, Length 7,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-201ENST00000315249 KPNA7A9QM74 516 aa14.15□□□□□ -0.14
RFFL-201ENST00000315249 HIST1H2AGP0C0S8 130 aaPredicted RBP14.15□□□□□ -0.14
RFFL-201ENST00000315249 HIST1H2ADP20671 130 aa14.15□□□□□ -0.14
RFFL-201ENST00000315249 ITIH5Q86UX2 942 aa14.15□□□□□ -0.14
RFFL-201ENST00000315249 TBC1D19Q8N5T2 526 aa14.15□□□□□ -0.14
RFFL-201ENST00000315249 SAMD3Q8N6K7 520 aa14.15□□□□□ -0.14
RFFL-201ENST00000315249 HIST1H2AHQ96KK5 128 aa14.15□□□□□ -0.14
RFFL-201ENST00000315249 HIST1H2AJQ99878 128 aa14.15□□□□□ -0.14
RFFL-201ENST00000315249 H2AFJQ9BTM1 129 aa14.15□□□□□ -0.14
RFFL-201ENST00000315249 IL25Q9H293 177 aa14.15□□□□□ -0.14
RFFL-201ENST00000315249 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.15□□□□□ -0.14
RFFL-201ENST00000315249 MYO1DO94832 1006 aa14.15□□□□□ -0.14
RFFL-201ENST00000315249 IFNA8P32881 189 aa14.15□□□□□ -0.14
RFFL-201ENST00000315249 FMR1Q06787 632 aaKnown RBP eCLIP14.15□□□□□ -0.14
RFFL-201ENST00000315249 DGKZQ13574 1117 aa14.15□□□□□ -0.14
RFFL-201ENST00000315249 ZRANB3Q5FWF4 1079 aa14.15□□□□□ -0.14
RFFL-201ENST00000315249 CBWD2Q8IUF1 395 aa14.15□□□□□ -0.14
RFFL-201ENST00000315249 DDIASQ8IXT1 998 aa14.15□□□□□ -0.14
RFFL-201ENST00000315249 FKBP1AP62942 108 aaKnown RBP14.15□□□□□ -0.14
RFFL-201ENST00000315249 CUL2Q13617 745 aa14.15□□□□□ -0.14
RFFL-201ENST00000315249 CCDC144BQ3MJ40 725 aa14.15□□□□□ -0.14
RFFL-201ENST00000315249 CYFIP2Q96F07 1278 aa14.15□□□□□ -0.14
RFFL-201ENST00000315249 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.15□□□□□ -0.142e-7■■■□□ 18.7
RFFL-201ENST00000315249 IL17RBQ9NRM6 502 aa14.15□□□□□ -0.14
RFFL-201ENST00000315249 HDAC6Q9UBN7 1215 aa14.15□□□□□ -0.14
RFFL-201ENST00000315249 KLK7P49862 253 aa14.15□□□□□ -0.15
RFFL-201ENST00000315249 IZUMO3Q5VZ72 239 aa14.15□□□□□ -0.15
RFFL-201ENST00000315249 MORC4Q8TE76 937 aa14.15□□□□□ -0.15
RFFL-201ENST00000315249 ADAM2Q99965 735 aa14.15□□□□□ -0.15
RFFL-201ENST00000315249 AGPAT5Q9NUQ2 364 aa14.15□□□□□ -0.15
RFFL-201ENST00000315249 ADGRB1O14514 1584 aa14.14□□□□□ -0.15
RFFL-201ENST00000315249 GLE1Q53GS7 698 aaKnown RBP14.14□□□□□ -0.15
RFFL-201ENST00000315249 SPDYAQ5MJ70 313 aa14.14□□□□□ -0.15
RFFL-201ENST00000315249 CCDC197Q8NCU1 140 aa14.14□□□□□ -0.15
RFFL-201ENST00000315249 IDI2Q9BXS1 227 aa14.14□□□□□ -0.15
RFFL-201ENST00000315249 FAM198AQ9UFP1 575 aa14.14□□□□□ -0.15
RFFL-201ENST00000315249 PKP3Q9Y446 797 aa14.14□□□□□ -0.15
RFFL-201ENST00000315249 PPP3CCP48454 512 aa14.14□□□□□ -0.15
RFFL-201ENST00000315249 GALCP54803 685 aa14.14□□□□□ -0.15
RFFL-201ENST00000315249 GPR142Q7Z601 462 aa14.14□□□□□ -0.15
RFFL-201ENST00000315249 FAM118BQ9BPY3 351 aa14.14□□□□□ -0.15
RFFL-201ENST00000315249 RNF19AQ9NV58 838 aa14.14□□□□□ -0.15
RFFL-201ENST00000315249 TMEM150BA6NC51 233 aa14.14□□□□□ -0.15
RFFL-201ENST00000315249 MAPK13O15264 365 aa14.14□□□□□ -0.15
RFFL-201ENST00000315249 KLHL38Q2WGJ6 581 aa14.14□□□□□ -0.15
RFFL-201ENST00000315249 CD302Q8IX05 232 aa14.14□□□□□ -0.15
RFFL-201ENST00000315249 C1orf131Q8NDD1 294 aaKnown RBP14.14□□□□□ -0.15
RFFL-201ENST00000315249 DDX43Q9NXZ2 648 aaKnown RBP14.14□□□□□ -0.15
RFFL-201ENST00000315249 ZFATQ9P243 1243 aa14.14□□□□□ -0.15
RFFL-201ENST00000315249 PLA2G4CQ9UP65 541 aa14.14□□□□□ -0.15
RFFL-201ENST00000315249 CAV1Q03135 178 aa14.14□□□□□ -0.15
RFFL-201ENST00000315249 GRIK5Q16478 980 aa14.14□□□□□ -0.15
RFFL-201ENST00000315249 TAF2Q6P1X5 1199 aa14.14□□□□□ -0.15
RFFL-201ENST00000315249 EPM2AIP1Q7L775 607 aaPredicted RBP14.14□□□□□ -0.15
RFFL-201ENST00000315249 ZNF513Q8N8E2 541 aaPredicted RBP14.14□□□□□ -0.15
RFFL-201ENST00000315249 SPATA18Q8TC71 538 aa14.14□□□□□ -0.15
RFFL-201ENST00000315249 GIPC2Q8TF65 315 aa14.14□□□□□ -0.15
RFFL-201ENST00000315249 ACSF2Q96CM8 615 aaPredicted RBP14.14□□□□□ -0.15
RFFL-201ENST00000315249 SNF8Q96H20 258 aa14.14□□□□□ -0.15
RFFL-201ENST00000315249 CBWD1Q9BRT8 395 aa14.14□□□□□ -0.15
RFFL-201ENST00000315249 ATXN3LQ9H3M9 355 aa14.14□□□□□ -0.15
RFFL-201ENST00000315249 CNTNAP2Q9UHC6 1331 aa14.14□□□□□ -0.15
RFFL-201ENST00000315249 SLC12A8A0AV02 714 aa14.14□□□□□ -0.15
RFFL-201ENST00000315249 LHX1P48742 406 aa14.14□□□□□ -0.15
RFFL-201ENST00000315249 LIG3P49916 1009 aa14.14□□□□□ -0.15
RFFL-201ENST00000315249 EDRF1Q3B7T1 1238 aa14.14□□□□□ -0.15
RFFL-201ENST00000315249 FKBP1CQ5VVH2 108 aa14.14□□□□□ -0.15
RFFL-201ENST00000315249 OVOS1Q6IE37 1185 aa14.14□□□□□ -0.15
RFFL-201ENST00000315249 CHP1Q99653 195 aa14.14□□□□□ -0.15
RFFL-201ENST00000315249 A1CFQ9NQ94 594 aaKnown RBP14.14□□□□□ -0.15
RFFL-201ENST00000315249 A0A1W2PQC6 194 aa14.13□□□□□ -0.15
RFFL-201ENST00000315249 HIF1AQ16665 826 aa14.13□□□□□ -0.15
RFFL-201ENST00000315249 PPM1LQ5SGD2 360 aa14.13□□□□□ -0.15
RFFL-201ENST00000315249 LLGL2Q6P1M3 1020 aa14.13□□□□□ -0.15
RFFL-201ENST00000315249 PALB2Q86YC2 1186 aa14.13□□□□□ -0.15
RFFL-201ENST00000315249 ZNF507Q8TCN5 953 aa14.13□□□□□ -0.15
RFFL-201ENST00000315249 THG1LQ9NWX6 298 aaKnown RBP14.13□□□□□ -0.15
RFFL-201ENST00000315249 DEPDC5O75140 1603 aa14.13□□□□□ -0.15
RFFL-201ENST00000315249 FDPSP14324 419 aaKnown RBP14.13□□□□□ -0.15
RFFL-201ENST00000315249 AMPD2Q01433 879 aa14.13□□□□□ -0.15
RFFL-201ENST00000315249 NNTQ13423 1086 aa14.13□□□□□ -0.15
RFFL-201ENST00000315249 PPP1R36Q96LQ0 422 aa14.13□□□□□ -0.15
RFFL-201ENST00000315249 RNPC3Q96LT9 517 aaKnown RBP14.13□□□□□ -0.15
RFFL-201ENST00000315249 MLXIPLQ9NP71 852 aa14.13□□□□□ -0.15
RFFL-201ENST00000315249 FBXL5Q9UKA1 691 aa14.13□□□□□ -0.15
RFFL-201ENST00000315249 PLAAQ9Y263 795 aa14.13□□□□□ -0.15
RFFL-201ENST00000315249 PHLDB3Q6NSJ2 640 aa14.13□□□□□ -0.15
RFFL-201ENST00000315249 DAGLBQ8NCG7 672 aa14.13□□□□□ -0.15
RFFL-201ENST00000315249 TEKT4Q8WW24 435 aa14.13□□□□□ -0.15
RFFL-201ENST00000315249 TCRBV5S4A2TA0A5A2 114 aa14.13□□□□□ -0.15
RFFL-201ENST00000315249 PSMD3O43242 534 aa14.13□□□□□ -0.15
RFFL-201ENST00000315249 SLC2A3P11169 496 aa14.13□□□□□ -0.15
RFFL-201ENST00000315249 PRKAR2AP13861 404 aaKnown RBP14.13□□□□□ -0.15
RFFL-201ENST00000315249 OAZ1P54368 228 aa14.13□□□□□ -0.15
RFFL-201ENST00000315249 TBCCQ15814 346 aa14.13□□□□□ -0.15
RFFL-201ENST00000315249 Q4G0T1 1027 aa14.13□□□□□ -0.15
RFFL-201ENST00000315249 SMPD4Q9NXE4 827 aa14.13□□□□□ -0.15
RFFL-201ENST00000315249 SPARCL1Q14515 664 aa14.13□□□□□ -0.15
RFFL-201ENST00000315249 TRIM68Q6AZZ1 485 aa14.13□□□□□ -0.15
RFFL-201ENST00000315249 CATSPERGQ6ZRH7 1159 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms