RNA–Protein interactions for RNA: ENST00000309964.8

CLOCK-201, Transcript of clock circadian regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLOCK, Length 10,304 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-201ENST00000309964 SERPINB10P48595 397 aa3.34□□□□□ -1.88
CLOCK-201ENST00000309964 ZNF177Q13360 481 aaPredicted RBP3.34□□□□□ -1.88
CLOCK-201ENST00000309964 SLC18A3Q16572 532 aa3.34□□□□□ -1.88
CLOCK-201ENST00000309964 ITIH6Q6UXX5 1313 aa3.34□□□□□ -1.88
CLOCK-201ENST00000309964 PIGOQ8TEQ8 1089 aa3.34□□□□□ -1.88
CLOCK-201ENST00000309964 ASB2Q96Q27 587 aa3.34□□□□□ -1.88
CLOCK-201ENST00000309964 IDI2Q9BXS1 227 aa3.34□□□□□ -1.88
CLOCK-201ENST00000309964 TUT1Q9H6E5 874 aaKnown RBP3.34□□□□□ -1.88
CLOCK-201ENST00000309964 ACTR5Q9H9F9 607 aaPredicted RBP3.34□□□□□ -1.88
CLOCK-201ENST00000309964 RIC8BQ9NVN3 520 aa3.34□□□□□ -1.88
CLOCK-201ENST00000309964 COX16Q9P0S2 106 aa3.34□□□□□ -1.88
CLOCK-201ENST00000309964 DUX4Q9UBX2 424 aa3.34□□□□□ -1.88
CLOCK-201ENST00000309964 APPL1Q9UKG1 709 aa3.34□□□□□ -1.88
CLOCK-201ENST00000309964 GOLGA8RI6L899 631 aa3.34□□□□□ -1.88
CLOCK-201ENST00000309964 GCATO75600 419 aa3.34□□□□□ -1.88
CLOCK-201ENST00000309964 IL1R1P14778 569 aa3.34□□□□□ -1.88
CLOCK-201ENST00000309964 CASP14P31944 242 aa3.34□□□□□ -1.88
CLOCK-201ENST00000309964 GMPSP49915 693 aaPredicted RBP3.34□□□□□ -1.88
CLOCK-201ENST00000309964 NCALDP61601 193 aa3.34□□□□□ -1.88
CLOCK-201ENST00000309964 CDK16Q00536 496 aa3.34□□□□□ -1.88
CLOCK-201ENST00000309964 PDAP1Q13442 181 aaKnown RBP3.34□□□□□ -1.88
CLOCK-201ENST00000309964 DEFB115Q30KQ5 88 aa3.34□□□□□ -1.88
CLOCK-201ENST00000309964 KRT80Q6KB66 452 aa3.34□□□□□ -1.88
CLOCK-201ENST00000309964 AVL9Q8NBF6 648 aa3.34□□□□□ -1.88
CLOCK-201ENST00000309964 BANK1Q8NDB2 785 aa3.34□□□□□ -1.88
CLOCK-201ENST00000309964 CSGALNACT1Q8TDX6 532 aa3.34□□□□□ -1.88
CLOCK-201ENST00000309964 NAF1Q96HR8 494 aaKnown RBP3.34□□□□□ -1.88
CLOCK-201ENST00000309964 WNK4Q96J92 1243 aa3.34□□□□□ -1.88
CLOCK-201ENST00000309964 OSBPL1AQ9BXW6 950 aa3.34□□□□□ -1.88
CLOCK-201ENST00000309964 PUS3Q9BZE2 481 aaKnown RBP3.34□□□□□ -1.88
CLOCK-201ENST00000309964 NIF3L1Q9GZT8 377 aa3.34□□□□□ -1.88
CLOCK-201ENST00000309964 HHATLQ9HCP6 504 aa3.34□□□□□ -1.88
CLOCK-201ENST00000309964 FAM217BQ9NTX9 383 aaPredicted RBP3.34□□□□□ -1.88
CLOCK-201ENST00000309964 LMBRD1Q9NUN5 540 aa3.34□□□□□ -1.88
CLOCK-201ENST00000309964 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP3.34□□□□□ -1.88
CLOCK-201ENST00000309964 HEY1Q9Y5J3 304 aa3.34□□□□□ -1.88
CLOCK-201ENST00000309964 SLIT3O75094 1523 aa3.34□□□□□ -1.88
CLOCK-201ENST00000309964 A0A1W2PQJ5 194 aa3.34□□□□□ -1.88
CLOCK-201ENST00000309964 DYTNA2CJ06 578 aa3.34□□□□□ -1.88
CLOCK-201ENST00000309964 EVPLLA8MZ36 301 aa3.34□□□□□ -1.88
CLOCK-201ENST00000309964 F5H5T6 163 aa3.34□□□□□ -1.88
CLOCK-201ENST00000309964 CLIC2O15247 247 aa3.34□□□□□ -1.88
CLOCK-201ENST00000309964 KCNQ3O43525 872 aa3.34□□□□□ -1.88
CLOCK-201ENST00000309964 HSPA4LO95757 839 aa3.34□□□□□ -1.88
CLOCK-201ENST00000309964 SREBF1P36956 1147 aa3.34□□□□□ -1.88
CLOCK-201ENST00000309964 PIK3CGP48736 1102 aa3.34□□□□□ -1.88
CLOCK-201ENST00000309964 NR5A1Q13285 461 aa3.34□□□□□ -1.88
CLOCK-201ENST00000309964 GNA13Q14344 377 aa3.34□□□□□ -1.88
CLOCK-201ENST00000309964 INAVAQ3KP66 663 aa3.34□□□□□ -1.88
CLOCK-201ENST00000309964 POTEAQ6S8J7 498 aa3.34□□□□□ -1.88
CLOCK-201ENST00000309964 TRMT11Q7Z4G4 463 aaKnown RBP3.34□□□□□ -1.88
CLOCK-201ENST00000309964 CEP70Q8NHQ1 597 aa3.34□□□□□ -1.88
CLOCK-201ENST00000309964 ZNF564Q8TBZ8 553 aaPredicted RBP3.34□□□□□ -1.88
CLOCK-201ENST00000309964 SNF8Q96H20 258 aa3.34□□□□□ -1.88
CLOCK-201ENST00000309964 FAXDC2Q96IV6 333 aa3.34□□□□□ -1.88
CLOCK-201ENST00000309964 MS4A14Q96JA4 679 aa3.34□□□□□ -1.88
CLOCK-201ENST00000309964 SPATC1LQ9H0A9 340 aa3.34□□□□□ -1.88
CLOCK-201ENST00000309964 DNAJC12Q9UKB3 198 aa3.34□□□□□ -1.88
CLOCK-201ENST00000309964 PCDHGC5Q9Y5F6 944 aa3.34□□□□□ -1.88
CLOCK-201ENST00000309964 SETD1AO15047 1707 aaKnown RBP3.33□□□□□ -1.88
CLOCK-201ENST00000309964 hCG_1642624A0A1W2PR95 340 aa3.33□□□□□ -1.88
CLOCK-201ENST00000309964 URADA6NGE7 173 aa3.33□□□□□ -1.88
CLOCK-201ENST00000309964 SPRP35270 261 aaPredicted RBP3.33□□□□□ -1.88
CLOCK-201ENST00000309964 CSTF3Q12996 717 aaKnown RBP3.33□□□□□ -1.88
CLOCK-201ENST00000309964 BAATQ14032 418 aaPredicted RBP3.33□□□□□ -1.88
CLOCK-201ENST00000309964 CDO1Q16878 200 aa3.33□□□□□ -1.88
CLOCK-201ENST00000309964 C9orf131Q5VYM1 1079 aa3.33□□□□□ -1.88
CLOCK-201ENST00000309964 FBXL16Q8N461 479 aa3.33□□□□□ -1.88
CLOCK-201ENST00000309964 MCUQ8NE86 351 aa3.33□□□□□ -1.88
CLOCK-201ENST00000309964 CFAP61Q8NHU2 1237 aa3.33□□□□□ -1.88
CLOCK-201ENST00000309964 VAT1Q99536 393 aa3.33□□□□□ -1.88
CLOCK-201ENST00000309964 SPON2Q9BUD6 331 aa3.33□□□□□ -1.88
CLOCK-201ENST00000309964 ELP3Q9H9T3 547 aa3.33□□□□□ -1.88
CLOCK-201ENST00000309964 XAB2Q9HCS7 855 aaKnown RBP3.33□□□□□ -1.88
CLOCK-201ENST00000309964 TMCO1Q9UM00 188 aa3.33□□□□□ -1.88
CLOCK-201ENST00000309964 USP20Q9Y2K6 914 aa3.33□□□□□ -1.88
CLOCK-201ENST00000309964 DAGLAQ9Y4D2 1042 aa3.33□□□□□ -1.88
CLOCK-201ENST00000309964 PCDHA13Q9Y5I0 950 aa3.33□□□□□ -1.88
CLOCK-201ENST00000309964 CDY2AQ9Y6F7 541 aa3.33□□□□□ -1.88
CLOCK-201ENST00000309964 CDY1Q9Y6F8 540 aa3.33□□□□□ -1.88
CLOCK-201ENST00000309964 SF3B1O75533 1304 aaKnown RBP eCLIP3.33□□□□□ -1.883e-6■■■■■ 100.3
CLOCK-201ENST00000309964 MYH4Q9Y623 1939 aa3.33□□□□□ -1.88
CLOCK-201ENST00000309964 H3BQF6 201 aa3.33□□□□□ -1.88
CLOCK-201ENST00000309964 M0QYV0 167 aa3.33□□□□□ -1.88
CLOCK-201ENST00000309964 TM9SF1O15321 606 aa3.33□□□□□ -1.88
CLOCK-201ENST00000309964 TIMM44O43615 452 aa3.33□□□□□ -1.88
CLOCK-201ENST00000309964 ESRRAP11474 423 aaPredicted RBP3.33□□□□□ -1.88
CLOCK-201ENST00000309964 MYL4P12829 197 aa3.33□□□□□ -1.88
CLOCK-201ENST00000309964 GNL1P36915 607 aaPredicted RBP3.33□□□□□ -1.88
CLOCK-201ENST00000309964 PRKAA2P54646 552 aa3.33□□□□□ -1.88
CLOCK-201ENST00000309964 SKOR1P84550 965 aa3.33□□□□□ -1.88
CLOCK-201ENST00000309964 FOXO4P98177 505 aa3.33□□□□□ -1.88
CLOCK-201ENST00000309964 PRKAA1Q13131 559 aa3.33□□□□□ -1.88
CLOCK-201ENST00000309964 ALG11Q2TAA5 492 aa3.33□□□□□ -1.88
CLOCK-201ENST00000309964 AGAP9Q5VTM2 703 aa3.33□□□□□ -1.88
CLOCK-201ENST00000309964 OLFML2BQ68BL8 750 aa3.33□□□□□ -1.88
CLOCK-201ENST00000309964 ANKS6Q68DC2 871 aa3.33□□□□□ -1.88
CLOCK-201ENST00000309964 IL31Q6EBC2 164 aa3.33□□□□□ -1.88
CLOCK-201ENST00000309964 STK40Q8N2I9 435 aa3.33□□□□□ -1.88
CLOCK-201ENST00000309964 SYT2Q8N9I0 419 aaPredicted RBP3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms