RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 FEZF2Q8TBJ5 459 aa22.58■■□□□ 1.21
ATG4D-201ENST00000309469 UBXN6Q9BZV1 441 aa22.58■■□□□ 1.21
ATG4D-201ENST00000309469 GOLGA6L10A0A0M3HER8 536 aa22.57■■□□□ 1.2
ATG4D-201ENST00000309469 TLR3O15455 904 aaKnown RBP22.57■■□□□ 1.2
ATG4D-201ENST00000309469 RECQL4O94761 1208 aa22.57■■□□□ 1.2
ATG4D-201ENST00000309469 HSPA6P17066 643 aa22.57■■□□□ 1.2
ATG4D-201ENST00000309469 PTPN11Q06124 597 aaPredicted RBP22.57■■□□□ 1.2
ATG4D-201ENST00000309469 MYO1EQ12965 1108 aa22.57■■□□□ 1.2
ATG4D-201ENST00000309469 TRIM32Q13049 653 aa22.57■■□□□ 1.2
ATG4D-201ENST00000309469 NOGQ13253 232 aa22.57■■□□□ 1.2
ATG4D-201ENST00000309469 SMC1AQ14683 1233 aaKnown RBP22.57■■□□□ 1.2
ATG4D-201ENST00000309469 PPP2R5EQ16537 467 aa22.57■■□□□ 1.2
ATG4D-201ENST00000309469 ADAT2Q7Z6V5 191 aaKnown RBP22.57■■□□□ 1.2
ATG4D-201ENST00000309469 ERICH1Q86X53 443 aa22.57■■□□□ 1.2
ATG4D-201ENST00000309469 CELF4Q9BZC1 486 aaKnown RBP22.57■■□□□ 1.2
ATG4D-201ENST00000309469 FAM124BQ9H5Z6 455 aaPredicted RBP22.57■■□□□ 1.2
ATG4D-201ENST00000309469 CNTN3Q9P232 1028 aa22.57■■□□□ 1.2
ATG4D-201ENST00000309469 HMGXB4Q9UGU5 601 aa22.57■■□□□ 1.2
ATG4D-201ENST00000309469 RARBP10826 455 aa22.57■■□□□ 1.2
ATG4D-201ENST00000309469 CARSP49589 748 aaKnown RBP22.57■■□□□ 1.2
ATG4D-201ENST00000309469 NKX3-2P78367 333 aa22.57■■□□□ 1.2
ATG4D-201ENST00000309469 ORC1Q13415 861 aa22.57■■□□□ 1.2
ATG4D-201ENST00000309469 NBPF20Q3BBV1 942 aa22.57■■□□□ 1.2
ATG4D-201ENST00000309469 UBXN11Q5T124 520 aa22.57■■□□□ 1.2
ATG4D-201ENST00000309469 MAATS1Q7Z4T9 603 aa22.57■■□□□ 1.2
ATG4D-201ENST00000309469 TTC39CQ8N584 583 aa22.57■■□□□ 1.2
ATG4D-201ENST00000309469 BEST2Q8NFU1 509 aa22.57■■□□□ 1.2
ATG4D-201ENST00000309469 CASKIN2Q8WXE0 1202 aa22.57■■□□□ 1.2
ATG4D-201ENST00000309469 GDAP1L1Q96MZ0 367 aa22.57■■□□□ 1.2
ATG4D-201ENST00000309469 ST7Q9NRC1 585 aa22.57■■□□□ 1.2
ATG4D-201ENST00000309469 AMACRQ9UHK6 382 aa22.57■■□□□ 1.2
ATG4D-201ENST00000309469 GTF2IRD1Q9UHL9 959 aa22.57■■□□□ 1.2
ATG4D-201ENST00000309469 BARX2Q9UMQ3 279 aaPredicted RBP22.57■■□□□ 1.2
ATG4D-201ENST00000309469 ESYT3A0FGR9 886 aa22.56■■□□□ 1.2
ATG4D-201ENST00000309469 AOC2O75106 756 aa22.56■■□□□ 1.2
ATG4D-201ENST00000309469 AKAP5P24588 427 aa22.56■■□□□ 1.2
ATG4D-201ENST00000309469 EPHB4P54760 987 aa22.56■■□□□ 1.2
ATG4D-201ENST00000309469 CACNB2Q08289 660 aaPredicted RBP22.56■■□□□ 1.2
ATG4D-201ENST00000309469 INCA1Q0VD86 236 aa22.56■■□□□ 1.2
ATG4D-201ENST00000309469 GADD45GIP1Q8TAE8 222 aaPredicted RBP22.56■■□□□ 1.2
ATG4D-201ENST00000309469 IFT81Q8WYA0 676 aa22.56■■□□□ 1.2
ATG4D-201ENST00000309469 APOL6Q9BWW8 343 aa22.56■■□□□ 1.2
ATG4D-201ENST00000309469 VIPAS39Q9H9C1 493 aa22.56■■□□□ 1.2
ATG4D-201ENST00000309469 TUBGCP4Q9UGJ1 667 aa22.56■■□□□ 1.2
ATG4D-201ENST00000309469 TCRBV5S1A1TA0A578 114 aa22.55■■□□□ 1.2
ATG4D-201ENST00000309469 GJB6O95452 261 aa22.55■■□□□ 1.2
ATG4D-201ENST00000309469 EMBQ6PCB8 327 aa22.55■■□□□ 1.2
ATG4D-201ENST00000309469 C18orf25Q96B23 403 aaPredicted RBP22.55■■□□□ 1.2
ATG4D-201ENST00000309469 ERVK-5Q9HDB9 667 aa22.55■■□□□ 1.2
ATG4D-201ENST00000309469 TMEM191CA6NGB0 347 aa22.55■■□□□ 1.2
ATG4D-201ENST00000309469 PAK2Q13177 524 aa22.55■■□□□ 1.2
ATG4D-201ENST00000309469 DNAJC24Q6P3W2 148 aa22.55■■□□□ 1.2
ATG4D-201ENST00000309469 SND1Q7KZF4 910 aaKnown RBP eCLIP22.55■■□□□ 1.2
ATG4D-201ENST00000309469 SLC13A5Q86YT5 568 aaPredicted RBP22.55■■□□□ 1.2
ATG4D-201ENST00000309469 PLVAPQ9BX97 442 aa22.55■■□□□ 1.2
ATG4D-201ENST00000309469 IP6K2Q9UHH9 426 aa22.55■■□□□ 1.2
ATG4D-201ENST00000309469 NFU1Q9UMS0 254 aa22.55■■□□□ 1.2
ATG4D-201ENST00000309469 SBDSQ9Y3A5 250 aaKnown RBP eCLIP22.55■■□□□ 1.2
ATG4D-201ENST00000309469 BHMG1C9JSJ3 638 aaPredicted RBP22.54■■□□□ 1.2
ATG4D-201ENST00000309469 VDRP11473 427 aa22.54■■□□□ 1.2
ATG4D-201ENST00000309469 MAN1A1P33908 653 aa22.54■■□□□ 1.2
ATG4D-201ENST00000309469 NDST1P52848 882 aa22.54■■□□□ 1.2
ATG4D-201ENST00000309469 RPL7AP62424 266 aaKnown RBP22.54■■□□□ 1.2
ATG4D-201ENST00000309469 MRPS6P82932 125 aaKnown RBP22.54■■□□□ 1.2
ATG4D-201ENST00000309469 CAP1Q01518 475 aa22.54■■□□□ 1.2
ATG4D-201ENST00000309469 GABPB1Q06547 395 aaPredicted RBP22.54■■□□□ 1.2
ATG4D-201ENST00000309469 GPS2Q13227 327 aa22.54■■□□□ 1.2
ATG4D-201ENST00000309469 TRADDQ15628 312 aa22.54■■□□□ 1.2
ATG4D-201ENST00000309469 GLRA4Q5JXX5 417 aa22.54■■□□□ 1.2
ATG4D-201ENST00000309469 GDF6Q6KF10 455 aaPredicted RBP22.54■■□□□ 1.2
ATG4D-201ENST00000309469 LRRC52Q8N7C0 313 aa22.54■■□□□ 1.2
ATG4D-201ENST00000309469 HEXIM2Q96MH2 286 aaKnown RBP22.54■■□□□ 1.2
ATG4D-201ENST00000309469 UBQLN1Q9UMX0 589 aaKnown RBP22.54■■□□□ 1.2
ATG4D-201ENST00000309469 PPEF2O14830 753 aa22.53■■□□□ 1.2
ATG4D-201ENST00000309469 ADAMTS4O75173 837 aa22.53■■□□□ 1.2
ATG4D-201ENST00000309469 SP3Q02447 781 aa22.53■■□□□ 1.2
ATG4D-201ENST00000309469 CNGA2Q16280 664 aa22.53■■□□□ 1.2
ATG4D-201ENST00000309469 FAM228AQ86W67 206 aa22.53■■□□□ 1.2
ATG4D-201ENST00000309469 CAVIN3Q969G5 261 aa22.53■■□□□ 1.2
ATG4D-201ENST00000309469 TSPAN18Q96SJ8 248 aa22.53■■□□□ 1.2
ATG4D-201ENST00000309469 RNF39Q9H2S5 420 aa22.53■■□□□ 1.2
ATG4D-201ENST00000309469 ACBD3Q9H3P7 528 aa22.53■■□□□ 1.2
ATG4D-201ENST00000309469 XPNPEP3Q9NQH7 507 aa22.53■■□□□ 1.2
ATG4D-201ENST00000309469 PARP2Q9UGN5 583 aa22.53■■□□□ 1.2
ATG4D-201ENST00000309469 CYTH4Q9UIA0 394 aa22.53■■□□□ 1.2
ATG4D-201ENST00000309469 KIAA1257Q9ULG3 409 aa22.53■■□□□ 1.2
ATG4D-201ENST00000309469 STRIP2Q9ULQ0 834 aa22.53■■□□□ 1.2
ATG4D-201ENST00000309469 SMIM28A0A1B0GU29 152 aa22.53■■□□□ 1.2
ATG4D-201ENST00000309469 M0QZ92 97 aa22.53■■□□□ 1.2
ATG4D-201ENST00000309469 TTI1O43156 1089 aa22.53■■□□□ 1.2
ATG4D-201ENST00000309469 MICAL2O94851 1124 aa22.53■■□□□ 1.2
ATG4D-201ENST00000309469 OAS2P29728 719 aaKnown RBP22.53■■□□□ 1.2
ATG4D-201ENST00000309469 TAP1Q03518 808 aa22.53■■□□□ 1.2
ATG4D-201ENST00000309469 PTPN20Q4JDL3 420 aa22.53■■□□□ 1.2
ATG4D-201ENST00000309469 XKR4Q5GH76 650 aa22.53■■□□□ 1.2
ATG4D-201ENST00000309469 PPP1R15BQ5SWA1 713 aa22.53■■□□□ 1.2
ATG4D-201ENST00000309469 CYP4A22Q5TCH4 519 aa22.53■■□□□ 1.2
ATG4D-201ENST00000309469 RSPH3Q86UC2 560 aa22.53■■□□□ 1.2
ATG4D-201ENST00000309469 RHOT1Q8IXI2 618 aa22.53■■□□□ 1.2
ATG4D-201ENST00000309469 ZDHHC14Q8IZN3 488 aa22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms