RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 STXBP4Q6ZWJ1 553 aa21.38■■□□□ 1.01
PDZRN3-202ENST00000308537 LIMS2Q7Z4I7 341 aa21.38■■□□□ 1.01
PDZRN3-202ENST00000308537 LRRC52Q8N7C0 313 aa21.38■■□□□ 1.01
PDZRN3-202ENST00000308537 KIAA0895Q8NCT3 520 aa21.38■■□□□ 1.01
PDZRN3-202ENST00000308537 MCRS1Q96EZ8 462 aa21.38■■□□□ 1.01
PDZRN3-202ENST00000308537 ZSWIM3Q96MP5 696 aa21.38■■□□□ 1.01
PDZRN3-202ENST00000308537 HSFX1Q9UBD0 423 aa21.38■■□□□ 1.01
PDZRN3-202ENST00000308537 L1RE1Q9UN81 338 aa21.38■■□□□ 1.01
PDZRN3-202ENST00000308537 AGAP1Q9UPQ3 857 aa21.38■■□□□ 1.01
PDZRN3-202ENST00000308537 SLC27A5Q9Y2P5 690 aa21.38■■□□□ 1.01
PDZRN3-202ENST00000308537 SOAT2O75908 522 aa21.37■■□□□ 1.01
PDZRN3-202ENST00000308537 KRT85P78386 507 aa21.37■■□□□ 1.01
PDZRN3-202ENST00000308537 STK4Q13043 487 aa21.37■■□□□ 1.01
PDZRN3-202ENST00000308537 SV2CQ496J9 727 aa21.37■■□□□ 1.01
PDZRN3-202ENST00000308537 MTSS1LQ765P7 747 aa21.37■■□□□ 1.01
PDZRN3-202ENST00000308537 NELFCDQ8IXH7 590 aa21.37■■□□□ 1.01
PDZRN3-202ENST00000308537 C12orf56Q8IXR9 622 aa21.37■■□□□ 1.01
PDZRN3-202ENST00000308537 SPATA32Q96LK8 384 aa21.37■■□□□ 1.01
PDZRN3-202ENST00000308537 ZNF560Q96MR9 790 aa21.37■■□□□ 1.01
PDZRN3-202ENST00000308537 PHOX2BQ99453 314 aa21.37■■□□□ 1.01
PDZRN3-202ENST00000308537 PKMYT1Q99640 499 aa21.37■■□□□ 1.01
PDZRN3-202ENST00000308537 KXD1Q9BQD3 176 aa21.37■■□□□ 1.01
PDZRN3-202ENST00000308537 SLC39A2Q9NP94 309 aa21.37■■□□□ 1.01
PDZRN3-202ENST00000308537 GDAP2Q9NXN4 497 aa21.37■■□□□ 1.01
PDZRN3-202ENST00000308537 ITGA11Q9UKX5 1188 aa21.37■■□□□ 1.01
PDZRN3-202ENST00000308537 DSEQ9UL01 958 aa21.37■■□□□ 1.01
PDZRN3-202ENST00000308537 VPS13AQ96RL7 3174 aa21.36■■□□□ 1.01
PDZRN3-202ENST00000308537 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.36■■□□□ 1.01
PDZRN3-202ENST00000308537 ZNF233A6NK53 670 aa21.36■■□□□ 1.01
PDZRN3-202ENST00000308537 ECI2O75521 394 aa21.36■■□□□ 1.01
PDZRN3-202ENST00000308537 GJA1P17302 382 aa21.36■■□□□ 1.01
PDZRN3-202ENST00000308537 ATF6P18850 670 aa21.36■■□□□ 1.01
PDZRN3-202ENST00000308537 PNPLA4P41247 253 aa21.36■■□□□ 1.01
PDZRN3-202ENST00000308537 NUBP1P53384 320 aa21.36■■□□□ 1.01
PDZRN3-202ENST00000308537 TANGO2Q6ICL3 276 aa21.36■■□□□ 1.01
PDZRN3-202ENST00000308537 OSTM1Q86WC4 334 aa21.36■■□□□ 1.01
PDZRN3-202ENST00000308537 PDCL2Q8N4E4 241 aa21.36■■□□□ 1.01
PDZRN3-202ENST00000308537 SHKBP1Q8TBC3 707 aa21.36■■□□□ 1.01
PDZRN3-202ENST00000308537 MKNK1Q9BUB5 465 aa21.36■■□□□ 1.01
PDZRN3-202ENST00000308537 ZNF334Q9HCZ1 680 aaPredicted RBP21.36■■□□□ 1.01
PDZRN3-202ENST00000308537 TMLHEQ9NVH6 421 aa21.36■■□□□ 1.01
PDZRN3-202ENST00000308537 FBXL21Q9UKT6 434 aa21.36■■□□□ 1.01
PDZRN3-202ENST00000308537 CA14Q9ULX7 337 aa21.36■■□□□ 1.01
PDZRN3-202ENST00000308537 OBSL1O75147 1896 aa21.36■■□□□ 1.01
PDZRN3-202ENST00000308537 CACNA1IQ9P0X4 2223 aa21.36■■□□□ 1.01
PDZRN3-202ENST00000308537 SHISA7A6NL88 538 aa21.35■■□□□ 1.01
PDZRN3-202ENST00000308537 CLIC2O15247 247 aa21.35■■□□□ 1.01
PDZRN3-202ENST00000308537 GALR2O43603 387 aaPredicted RBP21.35■■□□□ 1.01
PDZRN3-202ENST00000308537 CDR1P51861 262 aa21.35■■□□□ 1.01
PDZRN3-202ENST00000308537 NDUFA8P51970 172 aa21.35■■□□□ 1.01
PDZRN3-202ENST00000308537 SNRPFP62306 86 aaKnown RBP21.35■■□□□ 1.01
PDZRN3-202ENST00000308537 SNRNP35Q16560 246 aaKnown RBP21.35■■□□□ 1.01
PDZRN3-202ENST00000308537 SLC39A12Q504Y0 691 aa21.35■■□□□ 1.01
PDZRN3-202ENST00000308537 FAM78AQ5JUQ0 283 aa21.35■■□□□ 1.01
PDZRN3-202ENST00000308537 PDZD4Q76G19 769 aaPredicted RBP21.35■■□□□ 1.01
PDZRN3-202ENST00000308537 CSGALNACT2Q8N6G5 542 aa21.35■■□□□ 1.01
PDZRN3-202ENST00000308537 FLCNQ8NFG4 579 aa21.35■■□□□ 1.01
PDZRN3-202ENST00000308537 PLEKHO2Q8TD55 490 aa21.35■■□□□ 1.01
PDZRN3-202ENST00000308537 CACTINQ8WUQ7 758 aaKnown RBP21.35■■□□□ 1.01
PDZRN3-202ENST00000308537 ZNF512Q96ME7 567 aaPredicted RBP21.35■■□□□ 1.01
PDZRN3-202ENST00000308537 ASB16Q96NS5 453 aa21.35■■□□□ 1.01
PDZRN3-202ENST00000308537 PRRX2Q99811 253 aa21.35■■□□□ 1.01
PDZRN3-202ENST00000308537 GOLPH3LQ9H4A5 285 aa21.35■■□□□ 1.01
PDZRN3-202ENST00000308537 ARHGEF3Q9NR81 526 aa21.35■■□□□ 1.01
PDZRN3-202ENST00000308537 PTPRDP23468 1912 aa21.35■■□□□ 1.01
PDZRN3-202ENST00000308537 NUP210Q8TEM1 1887 aaPredicted RBP21.35■■□□□ 1.01
PDZRN3-202ENST00000308537 GABRDO14764 452 aa21.34■■□□□ 1.01
PDZRN3-202ENST00000308537 HCRTO43612 131 aa21.34■■□□□ 1.01
PDZRN3-202ENST00000308537 PTPN5P54829 565 aa21.34■■□□□ 1.01
PDZRN3-202ENST00000308537 CCDC142Q17RM4 750 aa21.34■■□□□ 1.01
PDZRN3-202ENST00000308537 KMT5BQ4FZB7 885 aa21.34■■□□□ 1.01
PDZRN3-202ENST00000308537 GAREM2Q75VX8 874 aa21.34■■□□□ 1.01
PDZRN3-202ENST00000308537 LEMD2Q8NC56 503 aa21.34■■□□□ 1.01
PDZRN3-202ENST00000308537 PSMG2Q969U7 264 aa21.34■■□□□ 1.01
PDZRN3-202ENST00000308537 DDX23Q9BUQ8 820 aaKnown RBP21.34■■□□□ 1.01
PDZRN3-202ENST00000308537 ASAH2Q9NR71 780 aa21.34■■□□□ 1.01
PDZRN3-202ENST00000308537 DLGAP2Q9P1A6 1054 aa21.34■■□□□ 1.01
PDZRN3-202ENST00000308537 ZNF197O14709 1029 aa21.33■■□□□ 1.01
PDZRN3-202ENST00000308537 PRR29P0C7W0 189 aa21.33■■□□□ 1.01
PDZRN3-202ENST00000308537 RBP5P82980 135 aa21.33■■□□□ 1.01
PDZRN3-202ENST00000308537 CYP24A1Q07973 514 aa21.33■■□□□ 1.01
PDZRN3-202ENST00000308537 PSMD6Q15008 389 aa21.33■■□□□ 1.01
PDZRN3-202ENST00000308537 TEAD2Q15562 447 aa21.33■■□□□ 1.01
PDZRN3-202ENST00000308537 KNOP1Q1ED39 458 aaKnown RBP21.33■■□□□ 1.01
PDZRN3-202ENST00000308537 SOWAHAQ2M3V2 549 aa21.33■■□□□ 1.01
PDZRN3-202ENST00000308537 IQCEQ6IPM2 695 aa21.33■■□□□ 1.01
PDZRN3-202ENST00000308537 PHLDB3Q6NSJ2 640 aa21.33■■□□□ 1.01
PDZRN3-202ENST00000308537 DNAJB7Q7Z6W7 309 aaPredicted RBP21.33■■□□□ 1.01
PDZRN3-202ENST00000308537 WDR49Q8IV35 697 aa21.33■■□□□ 1.01
PDZRN3-202ENST00000308537 CEP57L1Q8IYX8 460 aa21.33■■□□□ 1.01
PDZRN3-202ENST00000308537 ELMOD1Q8N336 334 aa21.33■■□□□ 1.01
PDZRN3-202ENST00000308537 NOC3LQ8WTT2 800 aaKnown RBP21.33■■□□□ 1.01
PDZRN3-202ENST00000308537 TMEM174Q8WUU8 243 aa21.33■■□□□ 1.01
PDZRN3-202ENST00000308537 ZNF516Q92618 1163 aa21.33■■□□□ 1.01
PDZRN3-202ENST00000308537 ELSPBP1Q96BH3 223 aa21.33■■□□□ 1.01
PDZRN3-202ENST00000308537 RSPRY1Q96DX4 576 aa21.33■■□□□ 1.01
PDZRN3-202ENST00000308537 LPIN3Q9BQK8 851 aa21.33■■□□□ 1.01
PDZRN3-202ENST00000308537 KCTD10Q9H3F6 313 aa21.33■■□□□ 1.01
PDZRN3-202ENST00000308537 MFSD1Q9H3U5 465 aa21.33■■□□□ 1.01
PDZRN3-202ENST00000308537 TBC1D17Q9HA65 648 aa21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms