RNA–Protein interactions for RNA: ENST00000307340.7

USH2A-201, Transcript of usherin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USH2A, Length 18,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-201ENST00000307340 GDPD2Q9HCC8 539 aa4.2□□□□□ -1.74
USH2A-201ENST00000307340 DBR1Q9UK59 544 aaKnown RBP4.2□□□□□ -1.74
USH2A-201ENST00000307340 FAM32AQ9Y421 112 aaKnown RBP4.2□□□□□ -1.74
USH2A-201ENST00000307340 ALS2Q96Q42 1657 aa4.2□□□□□ -1.74
USH2A-201ENST00000307340 LRP6O75581 1613 aa4.2□□□□□ -1.74
USH2A-201ENST00000307340 TLDC2A0PJX2 215 aa4.2□□□□□ -1.74
USH2A-201ENST00000307340 FAM163BP0C2L3 166 aa4.2□□□□□ -1.74
USH2A-201ENST00000307340 VCPP55072 806 aaKnown RBP4.2□□□□□ -1.74
USH2A-201ENST00000307340 MMRN1Q13201 1228 aa4.2□□□□□ -1.74
USH2A-201ENST00000307340 RCN1Q15293 331 aa4.2□□□□□ -1.74
USH2A-201ENST00000307340 SYDE2Q5VT97 1194 aa4.2□□□□□ -1.74
USH2A-201ENST00000307340 TAF2Q6P1X5 1199 aa4.2□□□□□ -1.74
USH2A-201ENST00000307340 TRPM8Q7Z2W7 1104 aa4.2□□□□□ -1.74
USH2A-201ENST00000307340 SNX32Q86XE0 403 aa4.2□□□□□ -1.74
USH2A-201ENST00000307340 GPD1LQ8N335 351 aa4.2□□□□□ -1.74
USH2A-201ENST00000307340 NEDD1Q8NHV4 660 aa4.2□□□□□ -1.74
USH2A-201ENST00000307340 FBXO44Q9H4M3 255 aa4.2□□□□□ -1.74
USH2A-201ENST00000307340 PDE11AQ9HCR9 933 aa4.2□□□□□ -1.74
USH2A-201ENST00000307340 CROTQ9UKG9 612 aa4.2□□□□□ -1.74
USH2A-201ENST00000307340 KLHL33A6NCF5 533 aa4.2□□□□□ -1.74
USH2A-201ENST00000307340 PJA2O43164 708 aa4.2□□□□□ -1.74
USH2A-201ENST00000307340 COBLO75128 1261 aa4.2□□□□□ -1.74
USH2A-201ENST00000307340 ITGA2P17301 1181 aa4.2□□□□□ -1.74
USH2A-201ENST00000307340 PLCG1P19174 1290 aa4.2□□□□□ -1.74
USH2A-201ENST00000307340 ZNF33AQ06730 810 aa4.2□□□□□ -1.74
USH2A-201ENST00000307340 MSLNQ13421 630 aaPredicted RBP4.2□□□□□ -1.74
USH2A-201ENST00000307340 NIPAL1Q6NVV3 410 aa4.2□□□□□ -1.74
USH2A-201ENST00000307340 NYAP1Q6ZVC0 841 aa4.2□□□□□ -1.74
USH2A-201ENST00000307340 UBE2E3Q969T4 207 aa4.2□□□□□ -1.74
USH2A-201ENST00000307340 AGBL1Q96MI9 1066 aa4.2□□□□□ -1.74
USH2A-201ENST00000307340 STRBPQ96SI9 672 aaKnown RBP4.2□□□□□ -1.74
USH2A-201ENST00000307340 JPH1Q9HDC5 661 aaPredicted RBP4.2□□□□□ -1.74
USH2A-201ENST00000307340 NPTX2P47972 431 aa4.2□□□□□ -1.74
USH2A-201ENST00000307340 RIPK1Q13546 671 aa4.2□□□□□ -1.74
USH2A-201ENST00000307340 LARGE2Q8N3Y3 721 aa4.2□□□□□ -1.74
USH2A-201ENST00000307340 CNBD2Q96M20 576 aa4.2□□□□□ -1.74
USH2A-201ENST00000307340 HMG20AQ9NP66 347 aa4.2□□□□□ -1.74
USH2A-201ENST00000307340 TMEM114B3SHH9 223 aa4.19□□□□□ -1.74
USH2A-201ENST00000307340 FGF19O95750 216 aa4.19□□□□□ -1.74
USH2A-201ENST00000307340 CFBP00751 764 aa4.19□□□□□ -1.74
USH2A-201ENST00000307340 MRNIPQ6NTE8 343 aa4.19□□□□□ -1.74
USH2A-201ENST00000307340 ERO1BQ86YB8 467 aa4.19□□□□□ -1.74
USH2A-201ENST00000307340 SLC9A9Q8IVB4 645 aa4.19□□□□□ -1.74
USH2A-201ENST00000307340 USP38Q8NB14 1042 aa4.19□□□□□ -1.74
USH2A-201ENST00000307340 TRHDEQ9UKU6 1024 aa4.19□□□□□ -1.74
USH2A-201ENST00000307340 AFG3L2Q9Y4W6 797 aa4.19□□□□□ -1.74
USH2A-201ENST00000307340 AP1M2Q9Y6Q5 423 aa4.19□□□□□ -1.74
USH2A-201ENST00000307340 A0A0D9SFI3 127 aa4.19□□□□□ -1.74
USH2A-201ENST00000307340 PHF20L1A8MW92 1017 aa4.19□□□□□ -1.74
USH2A-201ENST00000307340 NPPAP01160 153 aa4.19□□□□□ -1.74
USH2A-201ENST00000307340 RRM1P23921 792 aa4.19□□□□□ -1.74
USH2A-201ENST00000307340 EEF1DP29692 281 aaKnown RBP4.19□□□□□ -1.74
USH2A-201ENST00000307340 GPD2P43304 727 aa4.19□□□□□ -1.74
USH2A-201ENST00000307340 POLR2LP62875 67 aaKnown RBP4.19□□□□□ -1.74
USH2A-201ENST00000307340 RBL2Q08999 1139 aa4.19□□□□□ -1.74
USH2A-201ENST00000307340 EPHA7Q15375 998 aa4.19□□□□□ -1.74
USH2A-201ENST00000307340 RAD54LQ92698 747 aa4.19□□□□□ -1.74
USH2A-201ENST00000307340 C18orf8Q96DM3 657 aa4.19□□□□□ -1.74
USH2A-201ENST00000307340 DBNDD2Q9BQY9 259 aa4.19□□□□□ -1.74
USH2A-201ENST00000307340 ILKAPQ9H0C8 392 aaPredicted RBP4.19□□□□□ -1.74
USH2A-201ENST00000307340 CCDC177Q9NQR7 707 aaPredicted RBP4.19□□□□□ -1.74
USH2A-201ENST00000307340 AHSPQ9NZD4 102 aa4.19□□□□□ -1.74
USH2A-201ENST00000307340 EXTL3O43909 919 aa4.19□□□□□ -1.74
USH2A-201ENST00000307340 ECDO95905 644 aaPredicted RBP4.19□□□□□ -1.74
USH2A-201ENST00000307340 KARSQ15046 597 aaKnown RBP4.19□□□□□ -1.74
USH2A-201ENST00000307340 METTL21CQ5VZV1 264 aa4.19□□□□□ -1.74
USH2A-201ENST00000307340 C1orf228Q6PIY5 440 aa4.19□□□□□ -1.74
USH2A-201ENST00000307340 TMC2Q8TDI7 906 aa4.19□□□□□ -1.74
USH2A-201ENST00000307340 TGS1Q96RS0 853 aaKnown RBP4.19□□□□□ -1.74
USH2A-201ENST00000307340 LY9Q9HBG7 655 aa4.19□□□□□ -1.74
USH2A-201ENST00000307340 C20orf96Q9NUD7 363 aaPredicted RBP4.19□□□□□ -1.74
USH2A-201ENST00000307340 BIRC5O15392 142 aa4.19□□□□□ -1.74
USH2A-201ENST00000307340 RXRAP19793 462 aa4.19□□□□□ -1.74
USH2A-201ENST00000307340 VEPH1Q14D04 833 aa4.19□□□□□ -1.74
USH2A-201ENST00000307340 ZNF174Q15697 407 aa4.19□□□□□ -1.74
USH2A-201ENST00000307340 MTX3Q5HYI7 312 aa4.19□□□□□ -1.74
USH2A-201ENST00000307340 TMIEQ8NEW7 156 aa4.19□□□□□ -1.74
USH2A-201ENST00000307340 KLHDC4Q8TBB5 520 aa4.19□□□□□ -1.74
USH2A-201ENST00000307340 FAM167BQ9BTA0 163 aa4.19□□□□□ -1.74
USH2A-201ENST00000307340 AP5M1Q9H0R1 490 aa4.19□□□□□ -1.74
USH2A-201ENST00000307340 SNX2O60749 519 aa4.19□□□□□ -1.74
USH2A-201ENST00000307340 DIAPH2O60879 1101 aa4.19□□□□□ -1.74
USH2A-201ENST00000307340 RASA1P20936 1047 aa4.19□□□□□ -1.74
USH2A-201ENST00000307340 HNRNPH3P31942 346 aaKnown RBP4.19□□□□□ -1.74
USH2A-201ENST00000307340 EFTUD2Q15029 972 aaKnown RBP eCLIP4.19□□□□□ -1.74
USH2A-201ENST00000307340 RASA2Q15283 850 aa4.19□□□□□ -1.74
USH2A-201ENST00000307340 ZNF699Q32M78 642 aa4.19□□□□□ -1.74
USH2A-201ENST00000307340 DPCR1Q3MIW9 517 aa4.19□□□□□ -1.74
USH2A-201ENST00000307340 KLHL12Q53G59 568 aa4.19□□□□□ -1.74
USH2A-201ENST00000307340 CDH24Q86UP0 819 aa4.19□□□□□ -1.74
USH2A-201ENST00000307340 SUCLG2Q96I99 432 aa4.19□□□□□ -1.74
USH2A-201ENST00000307340 RNPC3Q96LT9 517 aaKnown RBP4.19□□□□□ -1.74
USH2A-201ENST00000307340 ADGRG1Q9Y653 693 aa4.19□□□□□ -1.74
USH2A-201ENST00000307340 KRT19P08727 400 aa4.19□□□□□ -1.74
USH2A-201ENST00000307340 FBXO31Q5XUX0 539 aaPredicted RBP4.19□□□□□ -1.74
USH2A-201ENST00000307340 NOTUMQ6P988 496 aa4.19□□□□□ -1.74
USH2A-201ENST00000307340 CCDC90BQ9GZT6 254 aa4.19□□□□□ -1.74
USH2A-201ENST00000307340 THUMPD1Q9NXG2 353 aaKnown RBP4.19□□□□□ -1.74
USH2A-201ENST00000307340 VPS54Q9P1Q0 977 aa4.19□□□□□ -1.74
USH2A-201ENST00000307340 TBK1Q9UHD2 729 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms