RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 SNX24Q9Y343 169 aa11.23□□□□□ -0.61
SYNPO2-201ENST00000307142 CDY2AQ9Y6F7 541 aa11.23□□□□□ -0.61
SYNPO2-201ENST00000307142 LGALS2P05162 132 aa11.23□□□□□ -0.61
SYNPO2-201ENST00000307142 CXCL8P10145 99 aa11.23□□□□□ -0.61
SYNPO2-201ENST00000307142 GRK4P32298 578 aa11.23□□□□□ -0.61
SYNPO2-201ENST00000307142 ATG16L1Q676U5 607 aa11.23□□□□□ -0.61
SYNPO2-201ENST00000307142 OVOS1Q6IE37 1185 aa11.23□□□□□ -0.61
SYNPO2-201ENST00000307142 C7orf61Q8IZ16 206 aa11.23□□□□□ -0.61
SYNPO2-201ENST00000307142 RFFLQ8WZ73 363 aa11.23□□□□□ -0.61
SYNPO2-201ENST00000307142 BCL2L12Q9HB09 334 aa11.23□□□□□ -0.61
SYNPO2-201ENST00000307142 SCUBE2Q9NQ36 999 aa11.23□□□□□ -0.61
SYNPO2-201ENST00000307142 MRPL17Q9NRX2 175 aaKnown RBP11.23□□□□□ -0.61
SYNPO2-201ENST00000307142 EPS15L1Q9UBC2 864 aa11.23□□□□□ -0.61
SYNPO2-201ENST00000307142 MAPK13O15264 365 aa11.23□□□□□ -0.61
SYNPO2-201ENST00000307142 PHEXP78562 749 aa11.23□□□□□ -0.61
SYNPO2-201ENST00000307142 CAPRIN1Q14444 709 aaKnown RBP11.23□□□□□ -0.61
SYNPO2-201ENST00000307142 PPM1NQ8N819 430 aa11.23□□□□□ -0.61
SYNPO2-201ENST00000307142 NFKBIZQ9BYH8 718 aa11.23□□□□□ -0.61
SYNPO2-201ENST00000307142 RANBP17Q9H2T7 1088 aaKnown RBP11.23□□□□□ -0.61
SYNPO2-201ENST00000307142 RSAD1Q9HA92 442 aa11.23□□□□□ -0.61
SYNPO2-201ENST00000307142 PKP3Q9Y446 797 aa11.23□□□□□ -0.61
SYNPO2-201ENST00000307142 RASGRF2O14827 1237 aa11.23□□□□□ -0.61
SYNPO2-201ENST00000307142 PCK1P35558 622 aa11.23□□□□□ -0.61
SYNPO2-201ENST00000307142 SESN2P58004 480 aaPredicted RBP11.23□□□□□ -0.61
SYNPO2-201ENST00000307142 EPC2Q52LR7 807 aa11.23□□□□□ -0.61
SYNPO2-201ENST00000307142 C4orf19Q8IY42 314 aa11.23□□□□□ -0.61
SYNPO2-201ENST00000307142 SLC35G2Q8TBE7 412 aa11.23□□□□□ -0.61
SYNPO2-201ENST00000307142 NCK2O43639 380 aa11.22□□□□□ -0.61
SYNPO2-201ENST00000307142 MYO1DO94832 1006 aa11.22□□□□□ -0.61
SYNPO2-201ENST00000307142 CERS5Q8N5B7 392 aa11.22□□□□□ -0.61
SYNPO2-201ENST00000307142 ATP11CQ8NB49 1132 aa11.22□□□□□ -0.61
SYNPO2-201ENST00000307142 PDZD8Q8NEN9 1154 aa11.22□□□□□ -0.61
SYNPO2-201ENST00000307142 AIPL1Q9NZN9 384 aa11.22□□□□□ -0.61
SYNPO2-201ENST00000307142 SENP1Q9P0U3 644 aa11.22□□□□□ -0.61
SYNPO2-201ENST00000307142 PCDHB2Q9Y5E7 798 aa11.22□□□□□ -0.61
SYNPO2-201ENST00000307142 ORC6Q9Y5N6 252 aa11.22□□□□□ -0.61
SYNPO2-201ENST00000307142 CASQ2O14958 399 aaPredicted RBP11.22□□□□□ -0.61
SYNPO2-201ENST00000307142 ENDOD1O94919 500 aa11.22□□□□□ -0.61
SYNPO2-201ENST00000307142 CHRNA3P32297 505 aa11.22□□□□□ -0.61
SYNPO2-201ENST00000307142 PTPAQ15257 358 aa11.22□□□□□ -0.61
SYNPO2-201ENST00000307142 FIBCD1Q8N539 461 aa11.22□□□□□ -0.61
SYNPO2-201ENST00000307142 COPS5Q92905 334 aa11.22□□□□□ -0.61
SYNPO2-201ENST00000307142 NMRK2Q9NPI5 230 aa11.22□□□□□ -0.61
SYNPO2-201ENST00000307142 SLC12A8A0AV02 714 aa11.22□□□□□ -0.61
SYNPO2-201ENST00000307142 SMIM10L2AP0DMW4 78 aa11.22□□□□□ -0.61
SYNPO2-201ENST00000307142 SMIM10L2BP0DMW5 78 aa11.22□□□□□ -0.61
SYNPO2-201ENST00000307142 UCHL3P15374 230 aa11.22□□□□□ -0.61
SYNPO2-201ENST00000307142 MX2P20592 715 aa11.22□□□□□ -0.61
SYNPO2-201ENST00000307142 CDR2Q01850 454 aa11.22□□□□□ -0.61
SYNPO2-201ENST00000307142 ANKS3Q6ZW76 656 aa11.22□□□□□ -0.61
SYNPO2-201ENST00000307142 ZNF410Q86VK4 478 aa11.22□□□□□ -0.61
SYNPO2-201ENST00000307142 TTC17Q96AE7 1141 aa11.22□□□□□ -0.61
SYNPO2-201ENST00000307142 APOL5Q9BWW9 433 aa11.22□□□□□ -0.61
SYNPO2-201ENST00000307142 NRCAMQ92823 1304 aa11.22□□□□□ -0.61
SYNPO2-201ENST00000307142 KNDC1Q76NI1 1749 aa11.22□□□□□ -0.61
SYNPO2-201ENST00000307142 KRT38O76015 456 aa11.22□□□□□ -0.61
SYNPO2-201ENST00000307142 APRTP07741 180 aa11.22□□□□□ -0.61
SYNPO2-201ENST00000307142 ZRANB3Q5FWF4 1079 aa11.22□□□□□ -0.61
SYNPO2-201ENST00000307142 POP1Q99575 1024 aaKnown RBP11.22□□□□□ -0.61
SYNPO2-201ENST00000307142 CAPS2Q9BXY5 557 aa11.22□□□□□ -0.61
SYNPO2-201ENST00000307142 PCDHB5Q9Y5E4 795 aa11.22□□□□□ -0.61
SYNPO2-201ENST00000307142 CTDNEP1O95476 244 aa11.22□□□□□ -0.61
SYNPO2-201ENST00000307142 NDUFV1P49821 464 aa11.22□□□□□ -0.61
SYNPO2-201ENST00000307142 CASP7P55210 303 aa11.22□□□□□ -0.61
SYNPO2-201ENST00000307142 PDIA2Q13087 525 aaKnown RBP11.22□□□□□ -0.61
SYNPO2-201ENST00000307142 CUL1Q13616 776 aa11.22□□□□□ -0.61
SYNPO2-201ENST00000307142 TBC1D1Q86TI0 1168 aaPredicted RBP11.22□□□□□ -0.61
SYNPO2-201ENST00000307142 CDK5RAP1Q96SZ6 601 aaKnown RBP11.22□□□□□ -0.61
SYNPO2-201ENST00000307142 CASS4Q9NQ75 786 aa11.22□□□□□ -0.61
SYNPO2-201ENST00000307142 CCDC188H7C350 402 aa11.21□□□□□ -0.61
SYNPO2-201ENST00000307142 ZNF197O14709 1029 aa11.21□□□□□ -0.61
SYNPO2-201ENST00000307142 TBC1D12O60347 775 aa11.21□□□□□ -0.61
SYNPO2-201ENST00000307142 HIST1H2AGP0C0S8 130 aaPredicted RBP11.21□□□□□ -0.61
SYNPO2-201ENST00000307142 HIST1H2ADP20671 130 aa11.21□□□□□ -0.61
SYNPO2-201ENST00000307142 FASTKD1Q53R41 847 aaKnown RBP11.21□□□□□ -0.61
SYNPO2-201ENST00000307142 ACBD5Q5T8D3 534 aaPredicted RBP11.21□□□□□ -0.61
SYNPO2-201ENST00000307142 IPMKQ8NFU5 416 aa11.21□□□□□ -0.61
SYNPO2-201ENST00000307142 HIST1H2AHQ96KK5 128 aa11.21□□□□□ -0.61
SYNPO2-201ENST00000307142 HIST1H2AJQ99878 128 aa11.21□□□□□ -0.61
SYNPO2-201ENST00000307142 H2AFJQ9BTM1 129 aa11.21□□□□□ -0.61
SYNPO2-201ENST00000307142 AXLP30530 894 aa11.21□□□□□ -0.61
SYNPO2-201ENST00000307142 EDRF1Q3B7T1 1238 aa11.21□□□□□ -0.61
SYNPO2-201ENST00000307142 FBXO47Q5MNV8 452 aa11.21□□□□□ -0.61
SYNPO2-201ENST00000307142 PTRHD1Q6GMV3 140 aaKnown RBP11.21□□□□□ -0.61
SYNPO2-201ENST00000307142 SLC27A1Q6PCB7 646 aa11.21□□□□□ -0.61
SYNPO2-201ENST00000307142 CCDC137Q6PK04 289 aaKnown RBP11.21□□□□□ -0.61
SYNPO2-201ENST00000307142 RBM23Q86U06 439 aaKnown RBP11.21□□□□□ -0.61
SYNPO2-201ENST00000307142 CYFIP2Q96F07 1278 aa11.21□□□□□ -0.61
SYNPO2-201ENST00000307142 CAMKK2Q96RR4 588 aa11.21□□□□□ -0.61
SYNPO2-201ENST00000307142 SLC13A1Q9BZW2 595 aa11.21□□□□□ -0.61
SYNPO2-201ENST00000307142 SUN2Q9UH99 717 aa11.21□□□□□ -0.61
SYNPO2-201ENST00000307142 NALCNQ8IZF0 1738 aa11.21□□□□□ -0.61
SYNPO2-201ENST00000307142 AP3B1O00203 1094 aa11.21□□□□□ -0.61
SYNPO2-201ENST00000307142 PCDH8O95206 1070 aa11.21□□□□□ -0.61
SYNPO2-201ENST00000307142 CAV1Q03135 178 aa11.21□□□□□ -0.61
SYNPO2-201ENST00000307142 DBR1Q9UK59 544 aaKnown RBP11.21□□□□□ -0.61
SYNPO2-201ENST00000307142 NFU1Q9UMS0 254 aa11.21□□□□□ -0.61
SYNPO2-201ENST00000307142 FAM50BQ9Y247 325 aa11.21□□□□□ -0.61
SYNPO2-201ENST00000307142 MON2Q7Z3U7 1717 aa11.21□□□□□ -0.61
SYNPO2-201ENST00000307142 CASP4P49662 377 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms