RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 CXorf38Q8TB03 319 aa5.77□□□□□ -1.49
VPS50-202ENST00000305866 C1orf54Q8WWF1 131 aa5.77□□□□□ -1.49
VPS50-202ENST00000305866 POMGNT1Q8WZA1 660 aa5.77□□□□□ -1.49
VPS50-202ENST00000305866 GRAMD1AQ96CP6 724 aa5.77□□□□□ -1.49
VPS50-202ENST00000305866 LXNQ9BS40 222 aa5.77□□□□□ -1.49
VPS50-202ENST00000305866 NUP85Q9BW27 656 aa5.77□□□□□ -1.49
VPS50-202ENST00000305866 NIFKQ9BYG3 293 aaKnown RBP5.77□□□□□ -1.49
VPS50-202ENST00000305866 ZNRF3Q9ULT6 936 aa5.77□□□□□ -1.49
VPS50-202ENST00000305866 FRMD4BQ9Y2L6 1034 aa5.77□□□□□ -1.49
VPS50-202ENST00000305866 CD2APQ9Y5K6 639 aa5.77□□□□□ -1.49
VPS50-202ENST00000305866 ZHX2Q9Y6X8 837 aa5.77□□□□□ -1.49
VPS50-202ENST00000305866 PLXNA4Q9HCM2 1894 aa5.77□□□□□ -1.49
VPS50-202ENST00000305866 TCRBV7S3A2A0A539 114 aa5.76□□□□□ -1.49
VPS50-202ENST00000305866 TGDSO95455 350 aa5.76□□□□□ -1.49
VPS50-202ENST00000305866 TSHRP16473 764 aa5.76□□□□□ -1.49
VPS50-202ENST00000305866 ABCB4P21439 1286 aa5.76□□□□□ -1.49
VPS50-202ENST00000305866 CCNFP41002 786 aa5.76□□□□□ -1.49
VPS50-202ENST00000305866 IFNAR2P48551 515 aa5.76□□□□□ -1.49
VPS50-202ENST00000305866 EMP3P54852 163 aa5.76□□□□□ -1.49
VPS50-202ENST00000305866 SNX1Q13596 522 aa5.76□□□□□ -1.49
VPS50-202ENST00000305866 PSMD6Q15008 389 aa5.76□□□□□ -1.49
VPS50-202ENST00000305866 FNBP1LQ5T0N5 605 aa5.76□□□□□ -1.49
VPS50-202ENST00000305866 CDHR3Q6ZTQ4 885 aa5.76□□□□□ -1.49
VPS50-202ENST00000305866 OTUD6AQ7L8S5 288 aa5.76□□□□□ -1.49
VPS50-202ENST00000305866 LDHDQ86WU2 507 aa5.76□□□□□ -1.49
VPS50-202ENST00000305866 NCAPG2Q86XI2 1143 aa5.76□□□□□ -1.49
VPS50-202ENST00000305866 CEP57Q86XR8 500 aa5.76□□□□□ -1.49
VPS50-202ENST00000305866 ARMC2Q8NEN0 867 aa5.76□□□□□ -1.49
VPS50-202ENST00000305866 SLC7A14Q8TBB6 771 aa5.76□□□□□ -1.49
VPS50-202ENST00000305866 ZNF564Q8TBZ8 553 aaPredicted RBP5.76□□□□□ -1.49
VPS50-202ENST00000305866 ELMO3Q96BJ8 720 aa5.76□□□□□ -1.49
VPS50-202ENST00000305866 APOBEC3GQ9HC16 384 aaKnown RBP5.76□□□□□ -1.49
VPS50-202ENST00000305866 ETAA1Q9NY74 926 aa5.76□□□□□ -1.49
VPS50-202ENST00000305866 TAS2R1Q9NYW7 299 aa5.76□□□□□ -1.49
VPS50-202ENST00000305866 PCDHGB4Q9UN71 923 aa5.76□□□□□ -1.49
VPS50-202ENST00000305866 PCDHGB5Q9Y5G0 923 aa5.76□□□□□ -1.49
VPS50-202ENST00000305866 SNCAIPQ9Y6H5 919 aa5.76□□□□□ -1.49
VPS50-202ENST00000305866 NYNRINQ9P2P1 1898 aaKnown RBP5.76□□□□□ -1.49
VPS50-202ENST00000305866 PTPRDP23468 1912 aa5.76□□□□□ -1.49
VPS50-202ENST00000305866 NLRC5Q86WI3 1866 aa5.76□□□□□ -1.49
VPS50-202ENST00000305866 CSDE1O75534 798 aaKnown RBP5.76□□□□□ -1.49
VPS50-202ENST00000305866 GCNT3O95395 438 aa5.76□□□□□ -1.49
VPS50-202ENST00000305866 EZRP15311 586 aaKnown RBP5.76□□□□□ -1.49
VPS50-202ENST00000305866 PSMC4P43686 418 aa5.76□□□□□ -1.49
VPS50-202ENST00000305866 QARSP47897 775 aaKnown RBP5.76□□□□□ -1.49
VPS50-202ENST00000305866 SNAP25P60880 206 aa5.76□□□□□ -1.49
VPS50-202ENST00000305866 KRT76Q01546 638 aa5.76□□□□□ -1.49
VPS50-202ENST00000305866 CDK18Q07002 472 aa5.76□□□□□ -1.49
VPS50-202ENST00000305866 PGM5Q15124 567 aa5.76□□□□□ -1.49
VPS50-202ENST00000305866 BRDTQ58F21 947 aaPredicted RBP5.76□□□□□ -1.49
VPS50-202ENST00000305866 SH3D19Q5HYK7 790 aa5.76□□□□□ -1.49
VPS50-202ENST00000305866 LBX2Q6XYB7 198 aa5.76□□□□□ -1.49
VPS50-202ENST00000305866 ADGRG6Q86SQ4 1221 aa5.76□□□□□ -1.49
VPS50-202ENST00000305866 VSIG1Q86XK7 387 aa5.76□□□□□ -1.49
VPS50-202ENST00000305866 APLFQ8IW19 511 aaPredicted RBP5.76□□□□□ -1.49
VPS50-202ENST00000305866 MFN1Q8IWA4 741 aa5.76□□□□□ -1.49
VPS50-202ENST00000305866 XXYLT1Q8NBI6 393 aa5.76□□□□□ -1.49
VPS50-202ENST00000305866 RBBP8NLQ8NC74 664 aaPredicted RBP5.76□□□□□ -1.49
VPS50-202ENST00000305866 SYTL5Q8TDW5 730 aaPredicted RBP5.76□□□□□ -1.49
VPS50-202ENST00000305866 ZNF75CPQ92670 426 aaPredicted RBP5.76□□□□□ -1.49
VPS50-202ENST00000305866 TAF4BQ92750 862 aa5.76□□□□□ -1.49
VPS50-202ENST00000305866 NKD2Q969F2 451 aaPredicted RBP5.76□□□□□ -1.49
VPS50-202ENST00000305866 TRIM11Q96F44 468 aa5.76□□□□□ -1.49
VPS50-202ENST00000305866 PANX3Q96QZ0 392 aa5.76□□□□□ -1.49
VPS50-202ENST00000305866 CAMKK2Q96RR4 588 aa5.76□□□□□ -1.49
VPS50-202ENST00000305866 TRAIPQ9BWF2 469 aa5.76□□□□□ -1.49
VPS50-202ENST00000305866 FRMD8P1Q9BZ68 369 aaPredicted RBP5.76□□□□□ -1.49
VPS50-202ENST00000305866 TANGO6Q9C0B7 1094 aa5.76□□□□□ -1.49
VPS50-202ENST00000305866 C12orf65Q9H3J6 166 aaKnown RBP5.76□□□□□ -1.49
VPS50-202ENST00000305866 MMADHCQ9H3L0 296 aaPredicted RBP5.76□□□□□ -1.49
VPS50-202ENST00000305866 EPB41L1Q9H4G0 881 aa5.76□□□□□ -1.49
VPS50-202ENST00000305866 TMEM134Q9H6X4 195 aa5.76□□□□□ -1.49
VPS50-202ENST00000305866 MLXIPLQ9NP71 852 aa5.76□□□□□ -1.49
VPS50-202ENST00000305866 KCNH7Q9NS40 1196 aa5.76□□□□□ -1.49
VPS50-202ENST00000305866 MKS1Q9NXB0 559 aa5.76□□□□□ -1.49
VPS50-202ENST00000305866 TBX20Q9UMR3 447 aa5.76□□□□□ -1.49
VPS50-202ENST00000305866 H0YCG3 227 aa5.76□□□□□ -1.49
VPS50-202ENST00000305866 DNALI1O14645 258 aaPredicted RBP5.76□□□□□ -1.49
VPS50-202ENST00000305866 PSTPIP1O43586 416 aa5.76□□□□□ -1.49
VPS50-202ENST00000305866 C4BPAP04003 597 aaKnown RBP5.76□□□□□ -1.49
VPS50-202ENST00000305866 ETS1P14921 441 aa5.76□□□□□ -1.49
VPS50-202ENST00000305866 KCNA2P16389 499 aa5.76□□□□□ -1.49
VPS50-202ENST00000305866 AMPD1P23109 780 aa5.76□□□□□ -1.49
VPS50-202ENST00000305866 PTPN4P29074 926 aa5.76□□□□□ -1.49
VPS50-202ENST00000305866 SCNN1DP51172 638 aa5.76□□□□□ -1.49
VPS50-202ENST00000305866 GDF10P55107 478 aa5.76□□□□□ -1.49
VPS50-202ENST00000305866 PSMC5P62195 406 aa5.76□□□□□ -1.49
VPS50-202ENST00000305866 ROR2Q01974 943 aaKnown RBP5.76□□□□□ -1.49
VPS50-202ENST00000305866 SLC25A11Q02978 314 aaKnown RBP5.76□□□□□ -1.49
VPS50-202ENST00000305866 AP1B1Q10567 949 aa5.76□□□□□ -1.49
VPS50-202ENST00000305866 MAMLD1Q13495 774 aa5.76□□□□□ -1.49
VPS50-202ENST00000305866 TARBP2Q15633 366 aaKnown RBP5.76□□□□□ -1.49
VPS50-202ENST00000305866 NBPF20Q3BBV1 942 aa5.76□□□□□ -1.49
VPS50-202ENST00000305866 DCAF17Q5H9S7 520 aaPredicted RBP5.76□□□□□ -1.49
VPS50-202ENST00000305866 ANKRD22Q5VYY1 191 aa5.76□□□□□ -1.49
VPS50-202ENST00000305866 MSL1Q68DK7 614 aa5.76□□□□□ -1.49
VPS50-202ENST00000305866 PADI6Q6TGC4 694 aa5.76□□□□□ -1.49
VPS50-202ENST00000305866 TRIM72Q6ZMU5 477 aa5.76□□□□□ -1.49
VPS50-202ENST00000305866 ZNF534Q76KX8 674 aa5.76□□□□□ -1.49
VPS50-202ENST00000305866 NLRX1Q86UT6 975 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms