RNA–Protein interactions for RNA: ENST00000302731.4

CLP1-201, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

TSL 2 BASIC

Gene CLP1, Length 1,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-201ENST00000302731 ZMAT2Q96NC0 199 aaKnown RBP11.26□□□□□ -0.61
CLP1-201ENST00000302731 KRT12Q99456 494 aa11.26□□□□□ -0.61
CLP1-201ENST00000302731 SDCBP2Q9H190 292 aa11.26□□□□□ -0.61
CLP1-201ENST00000302731 SMYD3Q9H7B4 428 aa11.26□□□□□ -0.61
CLP1-201ENST00000302731 XPNPEP3Q9NQH7 507 aa11.26□□□□□ -0.61
CLP1-201ENST00000302731 GDF3Q9NR23 364 aa11.26□□□□□ -0.61
CLP1-201ENST00000302731 CHST12Q9NRB3 414 aa11.26□□□□□ -0.61
CLP1-201ENST00000302731 CREBZFQ9NS37 354 aa11.26□□□□□ -0.61
CLP1-201ENST00000302731 CHORDC1Q9UHD1 332 aaPredicted RBP11.26□□□□□ -0.61
CLP1-201ENST00000302731 TCRBV5S1A1TA0A578 114 aa11.25□□□□□ -0.61
CLP1-201ENST00000302731 TMEM110-MUSTN1A8MSY1 372 aa11.25□□□□□ -0.61
CLP1-201ENST00000302731 TLR3O15455 904 aaKnown RBP11.25□□□□□ -0.61
CLP1-201ENST00000302731 PGK1P00558 417 aa11.25□□□□□ -0.61
CLP1-201ENST00000302731 HMGCRP04035 888 aa11.25□□□□□ -0.61
CLP1-201ENST00000302731 CD19P15391 556 aa11.25□□□□□ -0.61
CLP1-201ENST00000302731 PNPLA4P41247 253 aa11.25□□□□□ -0.61
CLP1-201ENST00000302731 RNASE9P60153 205 aaKnown RBP11.25□□□□□ -0.61
CLP1-201ENST00000302731 CNGA2Q16280 664 aa11.25□□□□□ -0.61
CLP1-201ENST00000302731 MAP3K21Q5TCX8 1036 aa11.25□□□□□ -0.61
CLP1-201ENST00000302731 CCSAPQ6IQ19 270 aaPredicted RBP11.25□□□□□ -0.61
CLP1-201ENST00000302731 MAATS1Q7Z4T9 603 aa11.25□□□□□ -0.61
CLP1-201ENST00000302731 FAM228AQ86W67 206 aa11.25□□□□□ -0.61
CLP1-201ENST00000302731 KRT222Q8N1A0 295 aa11.25□□□□□ -0.61
CLP1-201ENST00000302731 WDTC1Q8N5D0 677 aa11.25□□□□□ -0.61
CLP1-201ENST00000302731 PCSK9Q8NBP7 692 aaKnown RBP11.25□□□□□ -0.61
CLP1-201ENST00000302731 C1orf131Q8NDD1 294 aaKnown RBP11.25□□□□□ -0.61
CLP1-201ENST00000302731 CCDC26Q8TAB7 109 aa11.25□□□□□ -0.61
CLP1-201ENST00000302731 HDAC7Q8WUI4 952 aa11.25□□□□□ -0.61
CLP1-201ENST00000302731 KRT35Q92764 455 aa11.25□□□□□ -0.61
CLP1-201ENST00000302731 NXF3Q9H4D5 531 aaKnown RBP11.25□□□□□ -0.61
CLP1-201ENST00000302731 VIPAS39Q9H9C1 493 aa11.25□□□□□ -0.61
CLP1-201ENST00000302731 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.25□□□□□ -0.61
CLP1-201ENST00000302731 WDR35Q9P2L0 1181 aa11.25□□□□□ -0.61
CLP1-201ENST00000302731 SRRDQ9UH36 339 aa11.25□□□□□ -0.61
CLP1-201ENST00000302731 IP6K2Q9UHH9 426 aa11.25□□□□□ -0.61
CLP1-201ENST00000302731 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.25□□□□□ -0.61
CLP1-201ENST00000302731 PDCD11Q14690 1871 aaKnown RBP11.25□□□□□ -0.61
CLP1-201ENST00000302731 BHMG1C9JSJ3 638 aaPredicted RBP11.24□□□□□ -0.61
CLP1-201ENST00000302731 PIRO00625 290 aa11.24□□□□□ -0.61
CLP1-201ENST00000302731 SART1O43290 800 aaKnown RBP11.24□□□□□ -0.61
CLP1-201ENST00000302731 PSTPIP1O43586 416 aa11.24□□□□□ -0.61
CLP1-201ENST00000302731 AOC2O75106 756 aa11.24□□□□□ -0.61
CLP1-201ENST00000302731 CAPN15O75808 1086 aa11.24□□□□□ -0.61
CLP1-201ENST00000302731 CABYRO75952 493 aa11.24□□□□□ -0.61
CLP1-201ENST00000302731 SASH3O75995 380 aa11.24□□□□□ -0.61
CLP1-201ENST00000302731 HEXIM1O94992 359 aaKnown RBP11.24□□□□□ -0.61
CLP1-201ENST00000302731 RAP1GAPP47736 663 aa11.24□□□□□ -0.61
CLP1-201ENST00000302731 GUCY2FP51841 1108 aa11.24□□□□□ -0.61
CLP1-201ENST00000302731 CDH8P55286 799 aa11.24□□□□□ -0.61
CLP1-201ENST00000302731 C9orf57Q5W0N0 161 aa11.24□□□□□ -0.61
CLP1-201ENST00000302731 GDF6Q6KF10 455 aaPredicted RBP11.24□□□□□ -0.61
CLP1-201ENST00000302731 EMBQ6PCB8 327 aa11.24□□□□□ -0.61
CLP1-201ENST00000302731 UNC93AQ86WB7 457 aa11.24□□□□□ -0.61
CLP1-201ENST00000302731 ERICH1Q86X53 443 aa11.24□□□□□ -0.61
CLP1-201ENST00000302731 C3orf20Q8ND61 904 aa11.24□□□□□ -0.61
CLP1-201ENST00000302731 PXYLP1Q8TE99 480 aa11.24□□□□□ -0.61
CLP1-201ENST00000302731 AENQ8WTP8 325 aaKnown RBP11.24□□□□□ -0.61
CLP1-201ENST00000302731 PPP1R13LQ8WUF5 828 aa11.24□□□□□ -0.61
CLP1-201ENST00000302731 BTBD6Q96KE9 485 aa11.24□□□□□ -0.61
CLP1-201ENST00000302731 RUNDC3BQ96NL0 473 aa11.24□□□□□ -0.61
CLP1-201ENST00000302731 NT5C1AQ9BXI3 368 aa11.24□□□□□ -0.61
CLP1-201ENST00000302731 ELOVL4Q9GZR5 314 aa11.24□□□□□ -0.61
CLP1-201ENST00000302731 RNF186Q9NXI6 227 aa11.24□□□□□ -0.61
CLP1-201ENST00000302731 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.24□□□□□ -0.61
CLP1-201ENST00000302731 IPPQ9Y573 584 aa11.24□□□□□ -0.61
CLP1-201ENST00000302731 CDY2AQ9Y6F7 541 aa11.24□□□□□ -0.61
CLP1-201ENST00000302731 SMIM28A0A1B0GU29 152 aa11.24□□□□□ -0.61
CLP1-201ENST00000302731 FAM170AA1A519 330 aa11.24□□□□□ -0.61
CLP1-201ENST00000302731 TMEM191CA6NGB0 347 aa11.24□□□□□ -0.61
CLP1-201ENST00000302731 O00370 1275 aa11.24□□□□□ -0.61
CLP1-201ENST00000302731 RAD51CO43502 376 aa11.24□□□□□ -0.61
CLP1-201ENST00000302731 ASGR1P07306 291 aa11.24□□□□□ -0.61
CLP1-201ENST00000302731 GLI1P08151 1106 aa11.24□□□□□ -0.61
CLP1-201ENST00000302731 FAM163BP0C2L3 166 aa11.24□□□□□ -0.61
CLP1-201ENST00000302731 PRKAR2AP13861 404 aaKnown RBP11.24□□□□□ -0.61
CLP1-201ENST00000302731 MARCKSL1P49006 195 aa11.24□□□□□ -0.61
CLP1-201ENST00000302731 EPHB4P54760 987 aa11.24□□□□□ -0.61
CLP1-201ENST00000302731 SLC7A5Q01650 507 aa11.24□□□□□ -0.61
CLP1-201ENST00000302731 MGAT3Q09327 533 aa11.24□□□□□ -0.61
CLP1-201ENST00000302731 TRIM32Q13049 653 aa11.24□□□□□ -0.61
CLP1-201ENST00000302731 NNTQ13423 1086 aa11.24□□□□□ -0.61
CLP1-201ENST00000302731 SGO2Q562F6 1265 aa11.24□□□□□ -0.61
CLP1-201ENST00000302731 PPP1R15BQ5SWA1 713 aa11.24□□□□□ -0.61
CLP1-201ENST00000302731 LRRC38Q5VT99 294 aa11.24□□□□□ -0.61
CLP1-201ENST00000302731 DNAJC24Q6P3W2 148 aa11.24□□□□□ -0.61
CLP1-201ENST00000302731 HACE1Q8IYU2 909 aa11.24□□□□□ -0.61
CLP1-201ENST00000302731 NIPA2Q8N8Q9 360 aa11.24□□□□□ -0.61
CLP1-201ENST00000302731 SMG8Q8ND04 991 aaKnown RBP11.24□□□□□ -0.61
CLP1-201ENST00000302731 FNIP1Q8TF40 1166 aa11.24□□□□□ -0.61
CLP1-201ENST00000302731 MAIP1Q8WWC4 291 aa11.24□□□□□ -0.61
CLP1-201ENST00000302731 ZNF560Q96MR9 790 aa11.24□□□□□ -0.61
CLP1-201ENST00000302731 TWNKQ96RR1 684 aa11.24□□□□□ -0.61
CLP1-201ENST00000302731 AP1M1Q9BXS5 423 aa11.24□□□□□ -0.61
CLP1-201ENST00000302731 SENP6Q9GZR1 1112 aaPredicted RBP11.24□□□□□ -0.61
CLP1-201ENST00000302731 DNAI2Q9GZS0 605 aa11.24□□□□□ -0.61
CLP1-201ENST00000302731 MIS12Q9H081 205 aa11.24□□□□□ -0.61
CLP1-201ENST00000302731 GDAP2Q9NXN4 497 aa11.24□□□□□ -0.61
CLP1-201ENST00000302731 MTUS1Q9ULD2 1270 aa11.24□□□□□ -0.61
CLP1-201ENST00000302731 HES2Q9Y543 173 aa11.24□□□□□ -0.61
CLP1-201ENST00000302731 GPR182O15218 404 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms