RNA–Protein interactions for RNA: ENST00000302500.4

CLCC1-201, Transcript of chloride channel CLIC like 1, humanhuman

TSL 1 (best) BASIC

Gene CLCC1, Length 1,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-201ENST00000302500 IGSF9Q9P2J2 1179 aa12.15□□□□□ -0.46
CLCC1-201ENST00000302500 ITGA11Q9UKX5 1188 aa12.15□□□□□ -0.46
CLCC1-201ENST00000302500 TRAF3IP3Q9Y228 551 aa12.15□□□□□ -0.46
CLCC1-201ENST00000302500 YIPF1Q9Y548 306 aa12.15□□□□□ -0.46
CLCC1-201ENST00000302500 F5P12259 2224 aa12.15□□□□□ -0.46
CLCC1-201ENST00000302500 CLIC2O15247 247 aa12.14□□□□□ -0.47
CLCC1-201ENST00000302500 HCRTO43612 131 aa12.14□□□□□ -0.47
CLCC1-201ENST00000302500 STAU1O95793 577 aaKnown RBP12.14□□□□□ -0.47
CLCC1-201ENST00000302500 CST3P01034 146 aaPredicted RBP12.14□□□□□ -0.47
CLCC1-201ENST00000302500 RPN1P04843 607 aaKnown RBP12.14□□□□□ -0.47
CLCC1-201ENST00000302500 RHOP08100 348 aa12.14□□□□□ -0.47
CLCC1-201ENST00000302500 ODC1P11926 461 aa12.14□□□□□ -0.47
CLCC1-201ENST00000302500 PSMD2Q13200 908 aa12.14□□□□□ -0.47
CLCC1-201ENST00000302500 MTMR3Q13615 1198 aa12.14□□□□□ -0.47
CLCC1-201ENST00000302500 KCNB1Q14721 858 aa12.14□□□□□ -0.47
CLCC1-201ENST00000302500 SOWAHAQ2M3V2 549 aa12.14□□□□□ -0.47
CLCC1-201ENST00000302500 IER5LQ5T953 404 aa12.14□□□□□ -0.47
CLCC1-201ENST00000302500 LIN9Q5TKA1 542 aa12.14□□□□□ -0.47
CLCC1-201ENST00000302500 CWF19L1Q69YN2 538 aaKnown RBP12.14□□□□□ -0.47
CLCC1-201ENST00000302500 PARM1Q6UWI2 310 aa12.14□□□□□ -0.47
CLCC1-201ENST00000302500 NELFCDQ8IXH7 590 aa12.14□□□□□ -0.47
CLCC1-201ENST00000302500 ZC3H3Q8IXZ2 948 aaKnown RBP12.14□□□□□ -0.47
CLCC1-201ENST00000302500 SYCP3Q8IZU3 236 aa12.14□□□□□ -0.47
CLCC1-201ENST00000302500 SLC44A3Q8N4M1 653 aa12.14□□□□□ -0.47
CLCC1-201ENST00000302500 FSIP1Q8NA03 581 aa12.14□□□□□ -0.47
CLCC1-201ENST00000302500 TCEAL4Q96EI5 215 aa12.14□□□□□ -0.47
CLCC1-201ENST00000302500 VRTNQ9H8Y1 702 aa12.14□□□□□ -0.47
CLCC1-201ENST00000302500 KIAA1586Q9HCI6 787 aa12.14□□□□□ -0.47
CLCC1-201ENST00000302500 CGNQ9P2M7 1197 aaKnown RBP12.14□□□□□ -0.47
CLCC1-201ENST00000302500 CDH7Q9ULB5 785 aa12.14□□□□□ -0.47
CLCC1-201ENST00000302500 ATP6V1DQ9Y5K8 247 aa12.14□□□□□ -0.47
CLCC1-201ENST00000302500 ZFP37Q9Y6Q3 630 aaPredicted RBP12.14□□□□□ -0.47
CLCC1-201ENST00000302500 FRYLO94915 3013 aa12.14□□□□□ -0.47
CLCC1-201ENST00000302500 WDR87Q6ZQQ6 2873 aa12.14□□□□□ -0.47
CLCC1-201ENST00000302500 FANCMQ8IYD8 2048 aa12.14□□□□□ -0.47
CLCC1-201ENST00000302500 KRBA1A5PL33 1030 aa12.13□□□□□ -0.47
CLCC1-201ENST00000302500 ZNF233A6NK53 670 aa12.13□□□□□ -0.47
CLCC1-201ENST00000302500 PDXKO00764 312 aa12.13□□□□□ -0.47
CLCC1-201ENST00000302500 CYB561D2O14569 222 aa12.13□□□□□ -0.47
CLCC1-201ENST00000302500 VNN1O95497 513 aa12.13□□□□□ -0.47
CLCC1-201ENST00000302500 CEBPBP17676 345 aa12.13□□□□□ -0.47
CLCC1-201ENST00000302500 FSHRP23945 695 aa12.13□□□□□ -0.47
CLCC1-201ENST00000302500 CASP4P49662 377 aa12.13□□□□□ -0.47
CLCC1-201ENST00000302500 VCPP55072 806 aaKnown RBP12.13□□□□□ -0.47
CLCC1-201ENST00000302500 NUCB2P80303 420 aa12.13□□□□□ -0.47
CLCC1-201ENST00000302500 TDGQ13569 410 aa12.13□□□□□ -0.47
CLCC1-201ENST00000302500 COBLL1Q53SF7 1204 aa12.13□□□□□ -0.47
CLCC1-201ENST00000302500 ELMSAN1Q6PJG2 1045 aa12.13□□□□□ -0.47
CLCC1-201ENST00000302500 STXBP4Q6ZWJ1 553 aa12.13□□□□□ -0.47
CLCC1-201ENST00000302500 GET4Q7L5D6 327 aaPredicted RBP12.13□□□□□ -0.47
CLCC1-201ENST00000302500 TRAPPC11Q7Z392 1133 aa12.13□□□□□ -0.47
CLCC1-201ENST00000302500 TMEM150AQ86TG1 271 aa12.13□□□□□ -0.47
CLCC1-201ENST00000302500 CEP57L1Q8IYX8 460 aa12.13□□□□□ -0.47
CLCC1-201ENST00000302500 HS6ST3Q8IZP7 471 aa12.13□□□□□ -0.47
CLCC1-201ENST00000302500 XXYLT1Q8NBI6 393 aa12.13□□□□□ -0.47
CLCC1-201ENST00000302500 ATAD1Q8NBU5 361 aa12.13□□□□□ -0.47
CLCC1-201ENST00000302500 SPATA18Q8TC71 538 aa12.13□□□□□ -0.47
CLCC1-201ENST00000302500 PARD3BQ8TEW8 1205 aa12.13□□□□□ -0.47
CLCC1-201ENST00000302500 ACSF2Q96CM8 615 aaPredicted RBP12.13□□□□□ -0.47
CLCC1-201ENST00000302500 CGRRF1Q99675 332 aa12.13□□□□□ -0.47
CLCC1-201ENST00000302500 IL21Q9HBE4 155 aa12.13□□□□□ -0.47
CLCC1-201ENST00000302500 CYP4F11Q9HBI6 524 aa12.13□□□□□ -0.47
CLCC1-201ENST00000302500 ZNF334Q9HCZ1 680 aaPredicted RBP12.13□□□□□ -0.47
CLCC1-201ENST00000302500 AGAP1Q9UPQ3 857 aa12.13□□□□□ -0.47
CLCC1-201ENST00000302500 NUMBLQ9Y6R0 609 aa12.13□□□□□ -0.47
CLCC1-201ENST00000302500 TICRRQ7Z2Z1 1910 aa12.13□□□□□ -0.47
CLCC1-201ENST00000302500 LRRIQ3A6PVS8 624 aaPredicted RBP12.12□□□□□ -0.47
CLCC1-201ENST00000302500 C4BPAP04003 597 aaKnown RBP12.12□□□□□ -0.47
CLCC1-201ENST00000302500 HMGA1P17096 107 aaKnown RBP12.12□□□□□ -0.47
CLCC1-201ENST00000302500 PNPLA4P41247 253 aa12.12□□□□□ -0.47
CLCC1-201ENST00000302500 DLG4P78352 724 aa12.12□□□□□ -0.47
CLCC1-201ENST00000302500 TFAMQ00059 246 aaKnown RBP12.12□□□□□ -0.47
CLCC1-201ENST00000302500 DUSP4Q13115 394 aa12.12□□□□□ -0.47
CLCC1-201ENST00000302500 BECN1Q14457 450 aa12.12□□□□□ -0.47
CLCC1-201ENST00000302500 SV2CQ496J9 727 aa12.12□□□□□ -0.47
CLCC1-201ENST00000302500 PABPC1LQ4VXU2 614 aaKnown RBP12.12□□□□□ -0.47
CLCC1-201ENST00000302500 FAM171BQ6P995 826 aa12.12□□□□□ -0.47
CLCC1-201ENST00000302500 DSTYKQ6XUX3 929 aa12.12□□□□□ -0.47
CLCC1-201ENST00000302500 GAREM2Q75VX8 874 aa12.12□□□□□ -0.47
CLCC1-201ENST00000302500 ELOA2Q8IYF1 753 aaPredicted RBP12.12□□□□□ -0.47
CLCC1-201ENST00000302500 ZNF687Q8N1G0 1237 aa12.12□□□□□ -0.47
CLCC1-201ENST00000302500 GUF1Q8N442 669 aaKnown RBP12.12□□□□□ -0.47
CLCC1-201ENST00000302500 TOP6BLQ8N6T0 577 aa12.12□□□□□ -0.47
CLCC1-201ENST00000302500 NXPE3Q969Y0 559 aa12.12□□□□□ -0.47
CLCC1-201ENST00000302500 ZSWIM3Q96MP5 696 aa12.12□□□□□ -0.47
CLCC1-201ENST00000302500 PGLYRP2Q96PD5 576 aa12.12□□□□□ -0.47
CLCC1-201ENST00000302500 PLA2G2FQ9BZM2 168 aa12.12□□□□□ -0.47
CLCC1-201ENST00000302500 TRPV4Q9HBA0 871 aa12.12□□□□□ -0.47
CLCC1-201ENST00000302500 SLC2A4RGQ9NR83 387 aa12.12□□□□□ -0.47
CLCC1-201ENST00000302500 TMEM30AQ9NV96 361 aa12.12□□□□□ -0.47
CLCC1-201ENST00000302500 HELZP42694 1942 aaKnown RBP12.12□□□□□ -0.47
CLCC1-201ENST00000302500 CFAP54Q96N23 3096 aa12.12□□□□□ -0.47
CLCC1-201ENST00000302500 ARNTLO00327 626 aa12.11□□□□□ -0.47
CLCC1-201ENST00000302500 MAPK13O15264 365 aa12.11□□□□□ -0.47
CLCC1-201ENST00000302500 XYLBO75191 536 aa12.11□□□□□ -0.47
CLCC1-201ENST00000302500 SOAT2O75908 522 aa12.11□□□□□ -0.47
CLCC1-201ENST00000302500 CPB1P15086 417 aa12.11□□□□□ -0.47
CLCC1-201ENST00000302500 BMP6P22004 513 aa12.11□□□□□ -0.47
CLCC1-201ENST00000302500 CYP2J2P51589 502 aa12.11□□□□□ -0.47
CLCC1-201ENST00000302500 TWF1Q12792 350 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms