RNA–Protein interactions for RNA: ENST00000302206.9

TPM3-202, Transcript of tropomyosin 3, humanhuman

TSL 3 BASIC

Gene TPM3, Length 741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-202ENST00000302206 SERINC5Q86VE9 423 aa12.77□□□□□ -0.37
TPM3-202ENST00000302206 PCSK9Q8NBP7 692 aaKnown RBP12.77□□□□□ -0.37
TPM3-202ENST00000302206 TMEM35BQ8NCS4 154 aa12.77□□□□□ -0.37
TPM3-202ENST00000302206 RAET1EQ8TD07 263 aa12.77□□□□□ -0.37
TPM3-202ENST00000302206 PXYLP1Q8TE99 480 aa12.77□□□□□ -0.37
TPM3-202ENST00000302206 TMEM40Q8WWA1 233 aa12.77□□□□□ -0.37
TPM3-202ENST00000302206 CPA5Q8WXQ8 436 aa12.77□□□□□ -0.37
TPM3-202ENST00000302206 CD101Q93033 1021 aa12.77□□□□□ -0.37
TPM3-202ENST00000302206 MS4A14Q96JA4 679 aa12.77□□□□□ -0.37
TPM3-202ENST00000302206 PNKPQ96T60 521 aa12.77□□□□□ -0.37
TPM3-202ENST00000302206 NAP1L3Q99457 506 aaPredicted RBP12.77□□□□□ -0.37
TPM3-202ENST00000302206 RHOXF2Q9BQY4 288 aa12.77□□□□□ -0.37
TPM3-202ENST00000302206 EIF2AQ9BY44 585 aaKnown RBP12.77□□□□□ -0.37
TPM3-202ENST00000302206 TRIM6Q9C030 488 aaPredicted RBP12.77□□□□□ -0.37
TPM3-202ENST00000302206 EPC1Q9H2F5 836 aa12.77□□□□□ -0.37
TPM3-202ENST00000302206 GOLPH3Q9H4A6 298 aa12.77□□□□□ -0.37
TPM3-202ENST00000302206 ARFGAP3Q9NP61 516 aa12.77□□□□□ -0.37
TPM3-202ENST00000302206 NXF1Q9UBU9 619 aaKnown RBP12.77□□□□□ -0.37
TPM3-202ENST00000302206 UBQLN1Q9UMX0 589 aaKnown RBP12.77□□□□□ -0.37
TPM3-202ENST00000302206 POLIQ9UNA4 740 aa12.77□□□□□ -0.37
TPM3-202ENST00000302206 AGAP1Q9UPQ3 857 aa12.77□□□□□ -0.37
TPM3-202ENST00000302206 PIN4Q9Y237 131 aaKnown RBP12.77□□□□□ -0.37
TPM3-202ENST00000302206 GINS2Q9Y248 185 aa12.77□□□□□ -0.37
TPM3-202ENST00000302206 CEP83Q9Y592 693 aa12.77□□□□□ -0.37
TPM3-202ENST00000302206 CCDC66A2RUB6 948 aa12.76□□□□□ -0.37
TPM3-202ENST00000302206 RRP9O43818 475 aaKnown RBP12.76□□□□□ -0.37
TPM3-202ENST00000302206 CILPO75339 1184 aa12.76□□□□□ -0.37
TPM3-202ENST00000302206 CALCAP01258 141 aa12.76□□□□□ -0.37
TPM3-202ENST00000302206 CD4P01730 458 aa12.76□□□□□ -0.37
TPM3-202ENST00000302206 CCL5P13501 91 aa12.76□□□□□ -0.37
TPM3-202ENST00000302206 PRKAR2AP13861 404 aaKnown RBP12.76□□□□□ -0.37
TPM3-202ENST00000302206 CD58P19256 250 aa12.76□□□□□ -0.37
TPM3-202ENST00000302206 CYP3A5P20815 502 aa12.76□□□□□ -0.37
TPM3-202ENST00000302206 CTNNA1P35221 906 aaKnown RBP12.76□□□□□ -0.37
TPM3-202ENST00000302206 RAD23BP54727 409 aa12.76□□□□□ -0.37
TPM3-202ENST00000302206 PPP2R5EQ16537 467 aa12.76□□□□□ -0.37
TPM3-202ENST00000302206 GDF6Q6KF10 455 aaPredicted RBP12.76□□□□□ -0.37
TPM3-202ENST00000302206 ZSWIM1Q9BR11 485 aa12.76□□□□□ -0.37
TPM3-202ENST00000302206 RNF208Q9H0X6 261 aa12.76□□□□□ -0.37
TPM3-202ENST00000302206 SDCBP2Q9H190 292 aa12.76□□□□□ -0.37
TPM3-202ENST00000302206 CHST12Q9NRB3 414 aa12.76□□□□□ -0.37
TPM3-202ENST00000302206 ADAM22Q9P0K1 906 aa12.76□□□□□ -0.37
TPM3-202ENST00000302206 BARX2Q9UMQ3 279 aaPredicted RBP12.76□□□□□ -0.37
TPM3-202ENST00000302206 PDCD11Q14690 1871 aaKnown RBP12.76□□□□□ -0.37
TPM3-202ENST00000302206 TLR3O15455 904 aaKnown RBP12.75□□□□□ -0.37
TPM3-202ENST00000302206 ATMINO43313 823 aaPredicted RBP12.75□□□□□ -0.37
TPM3-202ENST00000302206 RECQL4O94761 1208 aa12.75□□□□□ -0.37
TPM3-202ENST00000302206 CFHP08603 1231 aa12.75□□□□□ -0.37
TPM3-202ENST00000302206 VDRP11473 427 aa12.75□□□□□ -0.37
TPM3-202ENST00000302206 ATF7P17544 494 aaPredicted RBP12.75□□□□□ -0.37
TPM3-202ENST00000302206 COMTP21964 271 aa12.75□□□□□ -0.37
TPM3-202ENST00000302206 RRM1P23921 792 aa12.75□□□□□ -0.37
TPM3-202ENST00000302206 BRD2P25440 801 aaKnown RBP12.75□□□□□ -0.37
TPM3-202ENST00000302206 TNFRSF8P28908 595 aa12.75□□□□□ -0.37
TPM3-202ENST00000302206 CCND3P30281 292 aaPredicted RBP12.75□□□□□ -0.37
TPM3-202ENST00000302206 MAN1A1P33908 653 aa12.75□□□□□ -0.37
TPM3-202ENST00000302206 PEX5P50542 639 aa12.75□□□□□ -0.37
TPM3-202ENST00000302206 TAP1Q03518 808 aa12.75□□□□□ -0.37
TPM3-202ENST00000302206 TRIM32Q13049 653 aa12.75□□□□□ -0.37
TPM3-202ENST00000302206 TRIP12Q14669 1992 aaPredicted RBP12.75□□□□□ -0.37
TPM3-202ENST00000302206 MESDQ14696 234 aa12.75□□□□□ -0.37
TPM3-202ENST00000302206 KCNA10Q16322 511 aa12.75□□□□□ -0.37
TPM3-202ENST00000302206 MAP9Q49MG5 647 aa12.75□□□□□ -0.37
TPM3-202ENST00000302206 GPR153Q6NV75 609 aa12.75□□□□□ -0.37
TPM3-202ENST00000302206 SCARA5Q6ZMJ2 495 aa12.75□□□□□ -0.37
TPM3-202ENST00000302206 FAM228AQ86W67 206 aa12.75□□□□□ -0.37
TPM3-202ENST00000302206 SLC4A11Q8NBS3 891 aa12.75□□□□□ -0.37
TPM3-202ENST00000302206 WHAMMQ8TF30 809 aa12.75□□□□□ -0.37
TPM3-202ENST00000302206 PPP1R13LQ8WUF5 828 aa12.75□□□□□ -0.37
TPM3-202ENST00000302206 TMEM176AQ96HP8 235 aa12.75□□□□□ -0.37
TPM3-202ENST00000302206 SENP6Q9GZR1 1112 aaPredicted RBP12.75□□□□□ -0.37
TPM3-202ENST00000302206 NXF3Q9H4D5 531 aaKnown RBP12.75□□□□□ -0.37
TPM3-202ENST00000302206 SMYD3Q9H7B4 428 aa12.75□□□□□ -0.37
TPM3-202ENST00000302206 RBM12Q9NTZ6 932 aaKnown RBP12.75□□□□□ -0.37
TPM3-202ENST00000302206 PARVAQ9NVD7 372 aa12.75□□□□□ -0.37
TPM3-202ENST00000302206 ZNF446Q9NWS9 450 aa12.75□□□□□ -0.37
TPM3-202ENST00000302206 EHD2Q9NZN4 543 aa12.75□□□□□ -0.37
TPM3-202ENST00000302206 NOC2LQ9Y3T9 749 aaKnown RBP12.75□□□□□ -0.37
TPM3-202ENST00000302206 PCDHA3Q9Y5H8 950 aa12.75□□□□□ -0.37
TPM3-202ENST00000302206 CDY2AQ9Y6F7 541 aa12.75□□□□□ -0.37
TPM3-202ENST00000302206 PROSCO94903 275 aa12.74□□□□□ -0.37
TPM3-202ENST00000302206 ASGR1P07306 291 aa12.74□□□□□ -0.37
TPM3-202ENST00000302206 FAM163BP0C2L3 166 aa12.74□□□□□ -0.37
TPM3-202ENST00000302206 PNPLA4P41247 253 aa12.74□□□□□ -0.37
TPM3-202ENST00000302206 DNA2P51530 1060 aa12.74□□□□□ -0.37
TPM3-202ENST00000302206 GSCP56915 257 aaPredicted RBP12.74□□□□□ -0.37
TPM3-202ENST00000302206 VSNL1P62760 191 aa12.74□□□□□ -0.37
TPM3-202ENST00000302206 MGAT3Q09327 533 aa12.74□□□□□ -0.37
TPM3-202ENST00000302206 STILQ15468 1287 aa12.74□□□□□ -0.37
TPM3-202ENST00000302206 CNGA2Q16280 664 aa12.74□□□□□ -0.37
TPM3-202ENST00000302206 C8orf74Q6P047 294 aa12.74□□□□□ -0.37
TPM3-202ENST00000302206 MMS22LQ6ZRQ5 1243 aa12.74□□□□□ -0.37
TPM3-202ENST00000302206 HACE1Q8IYU2 909 aa12.74□□□□□ -0.37
TPM3-202ENST00000302206 DEFB123Q8N688 67 aa12.74□□□□□ -0.37
TPM3-202ENST00000302206 TFAP2BQ92481 460 aa12.74□□□□□ -0.37
TPM3-202ENST00000302206 ZMAT2Q96NC0 199 aaKnown RBP12.74□□□□□ -0.37
TPM3-202ENST00000302206 C11orf70Q9BRQ4 267 aa12.74□□□□□ -0.37
TPM3-202ENST00000302206 TSEN34Q9BSV6 310 aaKnown RBP12.74□□□□□ -0.37
TPM3-202ENST00000302206 LRRC1Q9BTT6 524 aa12.74□□□□□ -0.37
TPM3-202ENST00000302206 ELOVL4Q9GZR5 314 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms