RNA–Protein interactions for RNA: ENST00000299267.8

GABRB3-201, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 1 (best) BASIC

Gene GABRB3, Length 4,494 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-201ENST00000299267 BBOF1Q8ND07 529 aa10.73□□□□□ -0.69
GABRB3-201ENST00000299267 TPCN2Q8NHX9 752 aa10.73□□□□□ -0.69
GABRB3-201ENST00000299267 FEZF2Q8TBJ5 459 aa10.73□□□□□ -0.69
GABRB3-201ENST00000299267 FBF1Q8TES7 1133 aa10.73□□□□□ -0.69
GABRB3-201ENST00000299267 C12orf42Q96LP6 360 aa10.73□□□□□ -0.69
GABRB3-201ENST00000299267 PLCH1Q4KWH8 1693 aa10.73□□□□□ -0.69
GABRB3-201ENST00000299267 EXOC1LA0A1B0GW35 172 aa10.73□□□□□ -0.69
GABRB3-201ENST00000299267 M0R2N6 131 aa10.73□□□□□ -0.69
GABRB3-201ENST00000299267 DEUP1Q05D60 604 aa10.73□□□□□ -0.69
GABRB3-201ENST00000299267 VEPH1Q14D04 833 aa10.73□□□□□ -0.69
GABRB3-201ENST00000299267 MDH1BQ5I0G3 518 aa10.73□□□□□ -0.69
GABRB3-201ENST00000299267 HEATR6Q6AI08 1181 aaKnown RBP10.73□□□□□ -0.69
GABRB3-201ENST00000299267 RAPH1Q70E73 1250 aa10.73□□□□□ -0.69
GABRB3-201ENST00000299267 BBS5Q8N3I7 341 aa10.73□□□□□ -0.69
GABRB3-201ENST00000299267 SPATA20Q8TB22 786 aa10.73□□□□□ -0.69
GABRB3-201ENST00000299267 SCYL1Q96KG9 808 aa10.73□□□□□ -0.69
GABRB3-201ENST00000299267 YME1L1Q96TA2 773 aa10.73□□□□□ -0.69
GABRB3-201ENST00000299267 OSBPL8Q9BZF1 889 aa10.73□□□□□ -0.69
GABRB3-201ENST00000299267 GOLGA2P5Q9HBQ8 144 aa10.73□□□□□ -0.69
GABRB3-201ENST00000299267 BTAF1O14981 1849 aa10.73□□□□□ -0.69
GABRB3-201ENST00000299267 TBKBP1A7MCY6 615 aa10.72□□□□□ -0.69
GABRB3-201ENST00000299267 DDX3XO00571 662 aaKnown RBP eCLIP10.72□□□□□ -0.69
GABRB3-201ENST00000299267 GBP1P32455 592 aa10.72□□□□□ -0.69
GABRB3-201ENST00000299267 ARSEP51690 589 aa10.72□□□□□ -0.69
GABRB3-201ENST00000299267 EIF3EP60228 445 aaKnown RBP10.72□□□□□ -0.69
GABRB3-201ENST00000299267 BFSP2Q13515 415 aa10.72□□□□□ -0.69
GABRB3-201ENST00000299267 CCDC121Q6ZUS5 278 aa10.72□□□□□ -0.69
GABRB3-201ENST00000299267 FAM131BQ86XD5 332 aa10.72□□□□□ -0.69
GABRB3-201ENST00000299267 MCUQ8NE86 351 aa10.72□□□□□ -0.69
GABRB3-201ENST00000299267 HOMER3Q9NSC5 361 aa10.72□□□□□ -0.69
GABRB3-201ENST00000299267 DDIT4Q9NX09 232 aa10.72□□□□□ -0.69
GABRB3-201ENST00000299267 TAS2R14Q9NYV8 317 aa10.72□□□□□ -0.69
GABRB3-201ENST00000299267 SIK3Q9Y2K2 1263 aa10.72□□□□□ -0.69
GABRB3-201ENST00000299267 CEP290O15078 2479 aa10.72□□□□□ -0.69
GABRB3-201ENST00000299267 TLR2O60603 784 aa10.72□□□□□ -0.69
GABRB3-201ENST00000299267 RNF40O75150 1001 aa10.72□□□□□ -0.69
GABRB3-201ENST00000299267 KRT14P02533 472 aa10.72□□□□□ -0.69
GABRB3-201ENST00000299267 MCF2P10911 925 aa10.72□□□□□ -0.69
GABRB3-201ENST00000299267 RALAP11233 206 aa10.72□□□□□ -0.69
GABRB3-201ENST00000299267 ACCSLQ4AC99 568 aa10.72□□□□□ -0.69
GABRB3-201ENST00000299267 PLPPR4Q7Z2D5 763 aa10.72□□□□□ -0.69
GABRB3-201ENST00000299267 SCUBE3Q8IX30 993 aa10.72□□□□□ -0.69
GABRB3-201ENST00000299267 NXF3Q9H4D5 531 aaKnown RBP10.72□□□□□ -0.69
GABRB3-201ENST00000299267 DDX43Q9NXZ2 648 aaKnown RBP10.72□□□□□ -0.69
GABRB3-201ENST00000299267 PKD1L3Q7Z443 1732 aa10.72□□□□□ -0.69
GABRB3-201ENST00000299267 TADA3O75528 432 aa10.72□□□□□ -0.69
GABRB3-201ENST00000299267 CRCPO75575 148 aa10.72□□□□□ -0.69
GABRB3-201ENST00000299267 PTENP60484 403 aa10.72□□□□□ -0.69
GABRB3-201ENST00000299267 FIGNQ5HY92 759 aa10.72□□□□□ -0.69
GABRB3-201ENST00000299267 NOP9Q86U38 636 aaKnown RBP10.72□□□□□ -0.69
GABRB3-201ENST00000299267 GSDMBQ8TAX9 411 aa10.72□□□□□ -0.69
GABRB3-201ENST00000299267 EDEM1Q92611 657 aa10.72□□□□□ -0.69
GABRB3-201ENST00000299267 TMEM176AQ96HP8 235 aa10.72□□□□□ -0.69
GABRB3-201ENST00000299267 SMYD3Q9H7B4 428 aa10.72□□□□□ -0.69
GABRB3-201ENST00000299267 GTF3C4Q9UKN8 822 aa10.72□□□□□ -0.69
GABRB3-201ENST00000299267 ST3GAL5Q9UNP4 418 aa10.72□□□□□ -0.69
GABRB3-201ENST00000299267 NT5C1B-RDH14C9J2C7 533 aa10.72□□□□□ -0.69
GABRB3-201ENST00000299267 M0QYT0 321 aa10.72□□□□□ -0.69
GABRB3-201ENST00000299267 FKTNO75072 461 aa10.72□□□□□ -0.69
GABRB3-201ENST00000299267 ASGR1P07306 291 aa10.72□□□□□ -0.69
GABRB3-201ENST00000299267 KRT17Q04695 432 aa10.72□□□□□ -0.69
GABRB3-201ENST00000299267 PSMD6Q15008 389 aa10.72□□□□□ -0.69
GABRB3-201ENST00000299267 NOL9Q5SY16 702 aaKnown RBP10.72□□□□□ -0.69
GABRB3-201ENST00000299267 ADAM32Q8TC27 787 aa10.72□□□□□ -0.69
GABRB3-201ENST00000299267 SEPT8Q92599 483 aa10.72□□□□□ -0.69
GABRB3-201ENST00000299267 SYN2Q92777 582 aaPredicted RBP10.72□□□□□ -0.69
GABRB3-201ENST00000299267 ACO2Q99798 780 aaKnown RBP10.72□□□□□ -0.69
GABRB3-201ENST00000299267 CCDC68Q9H2F9 335 aa10.72□□□□□ -0.69
GABRB3-201ENST00000299267 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.72□□□□□ -0.69
GABRB3-201ENST00000299267 C10orf71Q711Q0 1435 aa10.71□□□□□ -0.69
GABRB3-201ENST00000299267 RASGRF2O14827 1237 aa10.71□□□□□ -0.69
GABRB3-201ENST00000299267 KCNN4O15554 427 aa10.71□□□□□ -0.69
GABRB3-201ENST00000299267 APOEP02649 317 aa10.71□□□□□ -0.69
GABRB3-201ENST00000299267 MMP3P08254 477 aa10.71□□□□□ -0.69
GABRB3-201ENST00000299267 TPI1P60174 286 aa10.71□□□□□ -0.69
GABRB3-201ENST00000299267 ATP2A3Q93084 1043 aa10.71□□□□□ -0.69
GABRB3-201ENST00000299267 CABS1Q96KC9 395 aa10.71□□□□□ -0.69
GABRB3-201ENST00000299267 ZFP42Q96MM3 310 aa10.71□□□□□ -0.69
GABRB3-201ENST00000299267 RUNDC3BQ96NL0 473 aa10.71□□□□□ -0.69
GABRB3-201ENST00000299267 XPNPEP1Q9NQW7 623 aa10.71□□□□□ -0.69
GABRB3-201ENST00000299267 TSPAN16Q9UKR8 245 aa10.71□□□□□ -0.69
GABRB3-201ENST00000299267 TELO2Q9Y4R8 837 aa10.71□□□□□ -0.69
GABRB3-201ENST00000299267 SCAMP3O14828 347 aaKnown RBP10.71□□□□□ -0.69
GABRB3-201ENST00000299267 APRTP07741 180 aa10.71□□□□□ -0.69
GABRB3-201ENST00000299267 MSH2P43246 934 aa10.71□□□□□ -0.69
GABRB3-201ENST00000299267 SESN2P58004 480 aaPredicted RBP10.71□□□□□ -0.69
GABRB3-201ENST00000299267 CTXN3Q4LDR2 81 aa10.71□□□□□ -0.69
GABRB3-201ENST00000299267 FAXCQ5TGI0 409 aa10.71□□□□□ -0.69
GABRB3-201ENST00000299267 TDRD10Q5VZ19 366 aaKnown RBP10.71□□□□□ -0.69
GABRB3-201ENST00000299267 NYAP1Q6ZVC0 841 aa10.71□□□□□ -0.69
GABRB3-201ENST00000299267 ANKMY2Q8IV38 441 aa10.71□□□□□ -0.69
GABRB3-201ENST00000299267 GDAP1Q8TB36 358 aa10.71□□□□□ -0.69
GABRB3-201ENST00000299267 PLAAQ9Y263 795 aa10.71□□□□□ -0.69
GABRB3-201ENST00000299267 PODXLO00592 558 aa10.71□□□□□ -0.7
GABRB3-201ENST00000299267 KPNA6O60684 536 aa10.71□□□□□ -0.7
GABRB3-201ENST00000299267 NNTQ13423 1086 aa10.71□□□□□ -0.7
GABRB3-201ENST00000299267 KCNA10Q16322 511 aa10.71□□□□□ -0.7
GABRB3-201ENST00000299267 C10orf120Q5SQS8 335 aa10.71□□□□□ -0.7
GABRB3-201ENST00000299267 HYIQ5T013 277 aa10.71□□□□□ -0.7
GABRB3-201ENST00000299267 FAM171A1Q5VUB5 890 aa10.71□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms