RNA–Protein interactions for RNA: ENST00000295400.10

TGFA-201, Transcript of transforming growth factor alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFA, Length 4,310 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFA-201ENST00000295400 PSMC3IPQ9P2W1 217 aaPredicted RBP12.19□□□□□ -0.46
TGFA-201ENST00000295400 MRPL42Q9Y6G3 142 aaKnown RBP12.19□□□□□ -0.46
TGFA-201ENST00000295400 F8VP50 259 aa12.19□□□□□ -0.46
TGFA-201ENST00000295400 TYK2P29597 1187 aa12.19□□□□□ -0.46
TGFA-201ENST00000295400 HOXA10P31260 410 aaPredicted RBP12.19□□□□□ -0.46
TGFA-201ENST00000295400 CNTN2Q02246 1040 aa12.19□□□□□ -0.46
TGFA-201ENST00000295400 PGM5Q15124 567 aa12.19□□□□□ -0.46
TGFA-201ENST00000295400 CLEC16AQ2KHT3 1053 aa12.19□□□□□ -0.46
TGFA-201ENST00000295400 SGSM1Q2NKQ1 1148 aa12.19□□□□□ -0.46
TGFA-201ENST00000295400 PPP1R2P3Q6NXS1 205 aa12.19□□□□□ -0.46
TGFA-201ENST00000295400 RNF135Q8IUD6 432 aa12.19□□□□□ -0.46
TGFA-201ENST00000295400 SERPINB12Q96P63 405 aa12.19□□□□□ -0.46
TGFA-201ENST00000295400 PFDN4Q9NQP4 134 aa12.19□□□□□ -0.46
TGFA-201ENST00000295400 DNPEPQ9ULA0 475 aa12.19□□□□□ -0.46
TGFA-201ENST00000295400 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.18□□□□□ -0.46
TGFA-201ENST00000295400 BANF1O75531 89 aa12.18□□□□□ -0.46
TGFA-201ENST00000295400 CHKAP35790 457 aa12.18□□□□□ -0.46
TGFA-201ENST00000295400 UGCGQ16739 394 aa12.18□□□□□ -0.46
TGFA-201ENST00000295400 ZCWPW2Q504Y3 356 aa12.18□□□□□ -0.46
TGFA-201ENST00000295400 ARMC2Q8NEN0 867 aa12.18□□□□□ -0.46
TGFA-201ENST00000295400 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.18□□□□□ -0.46
TGFA-201ENST00000295400 CERKQ8TCT0 537 aa12.18□□□□□ -0.46
TGFA-201ENST00000295400 NIF3L1Q9GZT8 377 aa12.18□□□□□ -0.46
TGFA-201ENST00000295400 PXMP2Q9NR77 195 aa12.18□□□□□ -0.46
TGFA-201ENST00000295400 DDX56Q9NY93 547 aaKnown RBP12.18□□□□□ -0.46
TGFA-201ENST00000295400 SCOCQ9UIL1 159 aa12.18□□□□□ -0.46
TGFA-201ENST00000295400 COL1A1P02452 1464 aaPredicted RBP12.18□□□□□ -0.46
TGFA-201ENST00000295400 PROSCO94903 275 aa12.18□□□□□ -0.46
TGFA-201ENST00000295400 PGM1P36871 562 aa12.18□□□□□ -0.46
TGFA-201ENST00000295400 IL31Q6EBC2 164 aa12.18□□□□□ -0.46
TGFA-201ENST00000295400 PDZD4Q76G19 769 aaPredicted RBP12.18□□□□□ -0.46
TGFA-201ENST00000295400 FBXO36Q8NEA4 188 aa12.18□□□□□ -0.46
TGFA-201ENST00000295400 ZNF526Q8TF50 670 aaPredicted RBP12.18□□□□□ -0.46
TGFA-201ENST00000295400 STAMBPL1Q96FJ0 436 aa12.18□□□□□ -0.46
TGFA-201ENST00000295400 PCDHB18PQ96TA0 734 aa12.18□□□□□ -0.46
TGFA-201ENST00000295400 IDI2Q9BXS1 227 aa12.18□□□□□ -0.46
TGFA-201ENST00000295400 APOBEC2Q9Y235 224 aaKnown RBP12.18□□□□□ -0.46
TGFA-201ENST00000295400 GIPC1O14908 333 aa12.18□□□□□ -0.46
TGFA-201ENST00000295400 CSPG5O95196 566 aa12.18□□□□□ -0.46
TGFA-201ENST00000295400 OATP04181 439 aa12.18□□□□□ -0.46
TGFA-201ENST00000295400 ZNF772Q68DY9 489 aaPredicted RBP12.18□□□□□ -0.46
TGFA-201ENST00000295400 EFCAB12Q6NXP0 572 aa12.18□□□□□ -0.46
TGFA-201ENST00000295400 RGS9BPQ6ZS82 235 aa12.18□□□□□ -0.46
TGFA-201ENST00000295400 ARID3BQ8IVW6 561 aaPredicted RBP12.18□□□□□ -0.46
TGFA-201ENST00000295400 TRIM42Q8IWZ5 723 aa12.18□□□□□ -0.46
TGFA-201ENST00000295400 SLC26A7Q8TE54 656 aa12.18□□□□□ -0.46
TGFA-201ENST00000295400 ZNF606Q8WXB4 792 aa12.18□□□□□ -0.46
TGFA-201ENST00000295400 AFG3L2Q9Y4W6 797 aa12.18□□□□□ -0.46
TGFA-201ENST00000295400 TRIM49D1C9J1S8 452 aa12.18□□□□□ -0.46
TGFA-201ENST00000295400 M0R2N6 131 aa12.18□□□□□ -0.46
TGFA-201ENST00000295400 WNT10BO00744 389 aa12.18□□□□□ -0.46
TGFA-201ENST00000295400 SLC26A4O43511 780 aa12.18□□□□□ -0.46
TGFA-201ENST00000295400 ANP32DO95626 131 aa12.18□□□□□ -0.46
TGFA-201ENST00000295400 PECAM1P16284 738 aaPredicted RBP12.18□□□□□ -0.46
TGFA-201ENST00000295400 CASP2P42575 452 aa12.18□□□□□ -0.46
TGFA-201ENST00000295400 SLC12A1Q13621 1099 aa12.18□□□□□ -0.46
TGFA-201ENST00000295400 ATF7IP2Q5U623 682 aa12.18□□□□□ -0.46
TGFA-201ENST00000295400 ZNF662Q6ZS27 426 aa12.18□□□□□ -0.46
TGFA-201ENST00000295400 CLMNQ96JQ2 1002 aa12.18□□□□□ -0.46
TGFA-201ENST00000295400 FAM167AQ96KS9 214 aa12.18□□□□□ -0.46
TGFA-201ENST00000295400 THTPAQ9BU02 230 aa12.18□□□□□ -0.46
TGFA-201ENST00000295400 CISHQ9NSE2 258 aa12.18□□□□□ -0.46
TGFA-201ENST00000295400 COG5Q9UP83 839 aa12.18□□□□□ -0.46
TGFA-201ENST00000295400 MYH2Q9UKX2 1941 aa12.17□□□□□ -0.46
TGFA-201ENST00000295400 NEMP1O14524 444 aa12.17□□□□□ -0.46
TGFA-201ENST00000295400 PEX10O60683 326 aa12.17□□□□□ -0.46
TGFA-201ENST00000295400 ZNF200P98182 395 aaPredicted RBP12.17□□□□□ -0.46
TGFA-201ENST00000295400 PIGHQ14442 188 aaPredicted RBP12.17□□□□□ -0.46
TGFA-201ENST00000295400 PKN2Q16513 984 aaKnown RBP12.17□□□□□ -0.46
TGFA-201ENST00000295400 TWF2Q6IBS0 349 aaKnown RBP12.17□□□□□ -0.46
TGFA-201ENST00000295400 SEMA4DQ92854 862 aa12.17□□□□□ -0.46
TGFA-201ENST00000295400 HDAC11Q96DB2 347 aa12.17□□□□□ -0.46
TGFA-201ENST00000295400 STOML1Q9UBI4 398 aa12.17□□□□□ -0.46
TGFA-201ENST00000295400 PCDHA3Q9Y5H8 950 aa12.17□□□□□ -0.46
TGFA-201ENST00000295400 MYCP01106 439 aaPredicted RBP12.17□□□□□ -0.46
TGFA-201ENST00000295400 NQO1P15559 274 aaKnown RBP12.17□□□□□ -0.46
TGFA-201ENST00000295400 ABCD1P33897 745 aa12.17□□□□□ -0.46
TGFA-201ENST00000295400 POU5F1BQ06416 359 aa12.17□□□□□ -0.46
TGFA-201ENST00000295400 BMPR2Q13873 1038 aa12.17□□□□□ -0.46
TGFA-201ENST00000295400 TEX2Q8IWB9 1127 aa12.17□□□□□ -0.46
TGFA-201ENST00000295400 C4orf19Q8IY42 314 aa12.17□□□□□ -0.46
TGFA-201ENST00000295400 NDUFAF2Q8N183 169 aa12.17□□□□□ -0.46
TGFA-201ENST00000295400 MKL1Q969V6 931 aa12.17□□□□□ -0.46
TGFA-201ENST00000295400 HES6Q96HZ4 224 aa12.17□□□□□ -0.46
TGFA-201ENST00000295400 DCLK3Q9C098 648 aa12.17□□□□□ -0.46
TGFA-201ENST00000295400 NINJ2Q9NZG7 142 aa12.17□□□□□ -0.46
TGFA-201ENST00000295400 HEY2Q9UBP5 337 aa12.17□□□□□ -0.46
TGFA-201ENST00000295400 VAV3Q9UKW4 847 aa12.17□□□□□ -0.46
TGFA-201ENST00000295400 B2RBV5 119 aa12.17□□□□□ -0.46
TGFA-201ENST00000295400 EFNA5P52803 228 aa12.17□□□□□ -0.46
TGFA-201ENST00000295400 SYDE1Q6ZW31 735 aaPredicted RBP12.17□□□□□ -0.46
TGFA-201ENST00000295400 USP33Q8TEY7 942 aa12.17□□□□□ -0.46
TGFA-201ENST00000295400 PGBD4Q96DM1 585 aa12.17□□□□□ -0.46
TGFA-201ENST00000295400 TIPINQ9BVW5 301 aa12.17□□□□□ -0.46
TGFA-201ENST00000295400 CEP41Q9BYV8 373 aa12.17□□□□□ -0.46
TGFA-201ENST00000295400 TRIM4Q9C037 500 aa12.17□□□□□ -0.46
TGFA-201ENST00000295400 TRIM33Q9UPN9 1127 aa12.17□□□□□ -0.46
TGFA-201ENST00000295400 APOL1O14791 398 aa12.16□□□□□ -0.46
TGFA-201ENST00000295400 MOCS2O96007 188 aaPredicted RBP12.16□□□□□ -0.46
TGFA-201ENST00000295400 SNHG28P0DPA3 235 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms